Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B107:B65
Extra
PDB:
ATOM 1 O3' G A 106 -164.866 -71.429 8.835 1.00 3.65 O
ATOM 2 P A A 107 -166.226 -70.587 8.705 1.00 15.17 P
ATOM 3 OP1 A A 107 -166.997 -70.798 9.963 1.00 15.17 O
ATOM 4 OP2 A A 107 -166.858 -70.940 7.390 1.00 15.17 O
ATOM 5 O5' A A 107 -165.692 -69.108 8.643 1.00 15.17 O
ATOM 6 C5' A A 107 -165.147 -68.498 9.787 1.00 15.17 C
ATOM 7 C4' A A 107 -165.878 -67.245 10.076 1.00 15.17 C
ATOM 8 O4' A A 107 -166.055 -66.543 8.822 1.00 15.17 O
ATOM 9 C3' A A 107 -167.275 -67.453 10.657 1.00 15.17 C
ATOM 10 O3' A A 107 -167.556 -66.438 11.605 1.00 15.17 O
ATOM 11 C2' A A 107 -168.201 -67.296 9.453 1.00 15.17 C
ATOM 12 O2' A A 107 -169.498 -66.817 9.780 1.00 15.17 O
ATOM 13 C1' A A 107 -167.429 -66.293 8.599 1.00 15.17 C
ATOM 14 N9 A A 107 -167.678 -66.388 7.166 1.00 14.88 N
ATOM 15 C8 A A 107 -168.201 -67.344 6.343 1.00 14.88 C
ATOM 16 N7 A A 107 -168.240 -66.951 5.089 1.00 14.88 N
ATOM 17 C5 A A 107 -167.706 -65.665 5.107 1.00 14.88 C
ATOM 18 C6 A A 107 -167.451 -64.678 4.130 1.00 14.88 C
ATOM 19 N6 A A 107 -167.682 -64.776 2.822 1.00 14.88 N
ATOM 20 N1 A A 107 -166.918 -63.515 4.539 1.00 14.88 N
ATOM 21 C2 A A 107 -166.666 -63.338 5.847 1.00 14.88 C
ATOM 22 N3 A A 107 -166.856 -64.167 6.864 1.00 14.88 N
ATOM 23 C4 A A 107 -167.372 -65.320 6.394 1.00 14.88 C
ATOM 24 P A A 108 -168.244 -66.832 12.981 1.00 9.21 P
ATOM 25 OP1 A A 108 -169.221 -67.911 12.672 1.00 9.21 O
ATOM 26 OP2 A A 108 -168.721 -65.576 13.600 1.00 9.21 O
ATOM 27 O5' A A 108 -167.049 -67.425 13.830 1.00 9.21 O
TER
ATOM 1 O3' U B 64 -170.393 -65.626 0.116 1.00 12.32 O
ATOM 2 P A B 65 -169.402 -66.893 -0.037 1.00 26.33 P
ATOM 3 OP1 A B 65 -169.953 -67.754 -1.139 1.00 26.33 O
ATOM 4 OP2 A B 65 -169.241 -67.493 1.323 1.00 26.33 O
ATOM 5 O5' A B 65 -168.023 -66.202 -0.504 1.00 26.33 O
ATOM 6 C5' A B 65 -167.910 -64.775 -0.604 1.00 26.33 C
ATOM 7 C4' A B 65 -166.465 -64.285 -0.587 1.00 26.33 C
ATOM 8 O4' A B 65 -165.849 -64.617 0.681 1.00 26.33 O
ATOM 9 C3' A B 65 -165.549 -64.855 -1.662 1.00 26.33 C
ATOM 10 O3' A B 65 -164.556 -63.887 -1.995 1.00 26.33 O
ATOM 11 C2' A B 65 -164.882 -66.029 -0.964 1.00 26.33 C
ATOM 12 O2' A B 65 -163.610 -66.346 -1.479 1.00 26.33 O
ATOM 13 C1' A B 65 -164.795 -65.549 0.491 1.00 26.33 C
ATOM 14 N9 A B 65 -165.005 -66.606 1.467 1.00 25.55 N
ATOM 15 C8 A B 65 -165.564 -67.853 1.318 1.00 25.55 C
ATOM 16 N7 A B 65 -165.670 -68.524 2.447 1.00 25.55 N
ATOM 17 C5 A B 65 -165.176 -67.637 3.380 1.00 25.55 C
ATOM 18 C6 A B 65 -165.017 -67.743 4.758 1.00 25.55 C
ATOM 19 N6 A B 65 -165.353 -68.837 5.462 1.00 25.55 N
ATOM 20 N1 A B 65 -164.492 -66.670 5.378 1.00 25.55 N
ATOM 21 C2 A B 65 -164.155 -65.593 4.662 1.00 25.55 C
ATOM 22 N3 A B 65 -164.255 -65.366 3.361 1.00 25.55 N
ATOM 23 C4 A B 65 -164.779 -66.451 2.792 1.00 25.55 C
ATOM 24 P G B 66 -164.655 -63.047 -3.364 1.00 31.83 P
ATOM 25 OP1 G B 66 -166.068 -63.107 -3.831 1.00 31.83 O
ATOM 26 OP2 G B 66 -163.579 -63.544 -4.259 1.00 31.83 O
ATOM 27 O5' G B 66 -164.308 -61.576 -2.897 1.00 31.83 O
TER
ATOM 2 P A A 107 -166.226 -70.587 8.705 1.00 15.17 P
ATOM 3 OP1 A A 107 -166.997 -70.798 9.963 1.00 15.17 O
ATOM 4 OP2 A A 107 -166.858 -70.940 7.390 1.00 15.17 O
ATOM 5 O5' A A 107 -165.692 -69.108 8.643 1.00 15.17 O
ATOM 6 C5' A A 107 -165.147 -68.498 9.787 1.00 15.17 C
ATOM 7 C4' A A 107 -165.878 -67.245 10.076 1.00 15.17 C
ATOM 8 O4' A A 107 -166.055 -66.543 8.822 1.00 15.17 O
ATOM 9 C3' A A 107 -167.275 -67.453 10.657 1.00 15.17 C
ATOM 10 O3' A A 107 -167.556 -66.438 11.605 1.00 15.17 O
ATOM 11 C2' A A 107 -168.201 -67.296 9.453 1.00 15.17 C
ATOM 12 O2' A A 107 -169.498 -66.817 9.780 1.00 15.17 O
ATOM 13 C1' A A 107 -167.429 -66.293 8.599 1.00 15.17 C
ATOM 14 N9 A A 107 -167.678 -66.388 7.166 1.00 14.88 N
ATOM 15 C8 A A 107 -168.201 -67.344 6.343 1.00 14.88 C
ATOM 16 N7 A A 107 -168.240 -66.951 5.089 1.00 14.88 N
ATOM 17 C5 A A 107 -167.706 -65.665 5.107 1.00 14.88 C
ATOM 18 C6 A A 107 -167.451 -64.678 4.130 1.00 14.88 C
ATOM 19 N6 A A 107 -167.682 -64.776 2.822 1.00 14.88 N
ATOM 20 N1 A A 107 -166.918 -63.515 4.539 1.00 14.88 N
ATOM 21 C2 A A 107 -166.666 -63.338 5.847 1.00 14.88 C
ATOM 22 N3 A A 107 -166.856 -64.167 6.864 1.00 14.88 N
ATOM 23 C4 A A 107 -167.372 -65.320 6.394 1.00 14.88 C
ATOM 24 P A A 108 -168.244 -66.832 12.981 1.00 9.21 P
ATOM 25 OP1 A A 108 -169.221 -67.911 12.672 1.00 9.21 O
ATOM 26 OP2 A A 108 -168.721 -65.576 13.600 1.00 9.21 O
ATOM 27 O5' A A 108 -167.049 -67.425 13.830 1.00 9.21 O
TER
ATOM 1 O3' U B 64 -170.393 -65.626 0.116 1.00 12.32 O
ATOM 2 P A B 65 -169.402 -66.893 -0.037 1.00 26.33 P
ATOM 3 OP1 A B 65 -169.953 -67.754 -1.139 1.00 26.33 O
ATOM 4 OP2 A B 65 -169.241 -67.493 1.323 1.00 26.33 O
ATOM 5 O5' A B 65 -168.023 -66.202 -0.504 1.00 26.33 O
ATOM 6 C5' A B 65 -167.910 -64.775 -0.604 1.00 26.33 C
ATOM 7 C4' A B 65 -166.465 -64.285 -0.587 1.00 26.33 C
ATOM 8 O4' A B 65 -165.849 -64.617 0.681 1.00 26.33 O
ATOM 9 C3' A B 65 -165.549 -64.855 -1.662 1.00 26.33 C
ATOM 10 O3' A B 65 -164.556 -63.887 -1.995 1.00 26.33 O
ATOM 11 C2' A B 65 -164.882 -66.029 -0.964 1.00 26.33 C
ATOM 12 O2' A B 65 -163.610 -66.346 -1.479 1.00 26.33 O
ATOM 13 C1' A B 65 -164.795 -65.549 0.491 1.00 26.33 C
ATOM 14 N9 A B 65 -165.005 -66.606 1.467 1.00 25.55 N
ATOM 15 C8 A B 65 -165.564 -67.853 1.318 1.00 25.55 C
ATOM 16 N7 A B 65 -165.670 -68.524 2.447 1.00 25.55 N
ATOM 17 C5 A B 65 -165.176 -67.637 3.380 1.00 25.55 C
ATOM 18 C6 A B 65 -165.017 -67.743 4.758 1.00 25.55 C
ATOM 19 N6 A B 65 -165.353 -68.837 5.462 1.00 25.55 N
ATOM 20 N1 A B 65 -164.492 -66.670 5.378 1.00 25.55 N
ATOM 21 C2 A B 65 -164.155 -65.593 4.662 1.00 25.55 C
ATOM 22 N3 A B 65 -164.255 -65.366 3.361 1.00 25.55 N
ATOM 23 C4 A B 65 -164.779 -66.451 2.792 1.00 25.55 C
ATOM 24 P G B 66 -164.655 -63.047 -3.364 1.00 31.83 P
ATOM 25 OP1 G B 66 -166.068 -63.107 -3.831 1.00 31.83 O
ATOM 26 OP2 G B 66 -163.579 -63.544 -4.259 1.00 31.83 O
ATOM 27 O5' G B 66 -164.308 -61.576 -2.897 1.00 31.83 O
TER
Atoms:
OP1: (-166.997,-70.798,9.963)
OP2: (-166.858,-70.940,7.390)
C3': (-167.275,-67.453,10.657)
C1': (-167.429,-66.293,8.599)
C5': (-165.147,-68.498,9.787)
O4': (-166.055,-66.543,8.822)
C8: (-168.201,-67.344,6.343)
O2': (-169.498,-66.817,9.780)
C6: (-167.451,-64.678,4.130)
C5: (-167.706,-65.665,5.107)
C4: (-167.372,-65.320,6.394)
P: (-166.226,-70.587,8.705)
C4': (-165.878,-67.245,10.076)
C2': (-168.201,-67.296,9.453)
C2: (-166.666,-63.338,5.847)
N1: (-166.918,-63.515,4.539)
N3: (-166.856,-64.167,6.864)
N6: (-167.682,-64.776,2.822)
N7: (-168.240,-66.951,5.089)
N9: (-167.678,-66.388,7.166)
O5': (-165.692,-69.108,8.643)
O3': (-167.556,-66.438,11.605)
OP2: (-166.858,-70.940,7.390)
C3': (-167.275,-67.453,10.657)
C1': (-167.429,-66.293,8.599)
C5': (-165.147,-68.498,9.787)
O4': (-166.055,-66.543,8.822)
C8: (-168.201,-67.344,6.343)
O2': (-169.498,-66.817,9.780)
C6: (-167.451,-64.678,4.130)
C5: (-167.706,-65.665,5.107)
C4: (-167.372,-65.320,6.394)
P: (-166.226,-70.587,8.705)
C4': (-165.878,-67.245,10.076)
C2': (-168.201,-67.296,9.453)
C2: (-166.666,-63.338,5.847)
N1: (-166.918,-63.515,4.539)
N3: (-166.856,-64.167,6.864)
N6: (-167.682,-64.776,2.822)
N7: (-168.240,-66.951,5.089)
N9: (-167.678,-66.388,7.166)
O5': (-165.692,-69.108,8.643)
O3': (-167.556,-66.438,11.605)
OP1: (-169.953,-67.754,-1.139)
OP2: (-169.241,-67.493,1.323)
C3': (-165.549,-64.855,-1.662)
C1': (-164.795,-65.549,0.491)
C5': (-167.910,-64.775,-0.604)
O4': (-165.849,-64.617,0.681)
C8: (-165.564,-67.853,1.318)
O2': (-163.610,-66.346,-1.479)
C6: (-165.017,-67.743,4.758)
C5: (-165.176,-67.637,3.380)
C4: (-164.779,-66.451,2.792)
P: (-169.402,-66.893,-0.037)
C4': (-166.465,-64.285,-0.587)
C2': (-164.882,-66.029,-0.964)
C2: (-164.155,-65.593,4.662)
N1: (-164.492,-66.670,5.378)
N3: (-164.255,-65.366,3.361)
N6: (-165.353,-68.837,5.462)
N7: (-165.670,-68.524,2.447)
N9: (-165.005,-66.606,1.467)
O5': (-168.023,-66.202,-0.504)
O3': (-164.556,-63.887,-1.995)
OP2: (-169.241,-67.493,1.323)
C3': (-165.549,-64.855,-1.662)
C1': (-164.795,-65.549,0.491)
C5': (-167.910,-64.775,-0.604)
O4': (-165.849,-64.617,0.681)
C8: (-165.564,-67.853,1.318)
O2': (-163.610,-66.346,-1.479)
C6: (-165.017,-67.743,4.758)
C5: (-165.176,-67.637,3.380)
C4: (-164.779,-66.451,2.792)
P: (-169.402,-66.893,-0.037)
C4': (-166.465,-64.285,-0.587)
C2': (-164.882,-66.029,-0.964)
C2: (-164.155,-65.593,4.662)
N1: (-164.492,-66.670,5.378)
N3: (-164.255,-65.366,3.361)
N6: (-165.353,-68.837,5.462)
N7: (-165.670,-68.524,2.447)
N9: (-165.005,-66.606,1.467)
O5': (-168.023,-66.202,-0.504)
O3': (-164.556,-63.887,-1.995)
Image (generated by PyMOL):