ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2416:2415

Extra

PDB:
ATOM 1 O3' A A 415 -15.470 64.898 34.363 1.00 87.71 O
ATOM 2 P A A 416 -14.161 64.154 34.911 1.00 78.51 P
ATOM 3 OP1 A A 416 -13.109 65.209 35.055 1.00 78.82 O
ATOM 4 OP2 A A 416 -13.906 63.003 34.012 1.00 78.67 O
ATOM 5 O5' A A 416 -14.609 63.619 36.360 1.00 77.47 O
ATOM 6 C5' A A 416 -14.326 64.378 37.542 1.00 77.06 C
ATOM 7 C4' A A 416 -14.069 63.494 38.737 1.00 76.11 C
ATOM 8 O4' A A 416 -15.309 62.846 39.085 1.00 75.68 O
ATOM 9 C3' A A 416 -13.036 62.402 38.507 1.00 75.91 C
ATOM 10 O3' A A 416 -11.933 62.435 39.468 1.00 75.45 O
ATOM 11 C2' A A 416 -13.807 61.080 38.554 1.00 75.44 C
ATOM 12 O2' A A 416 -13.172 60.077 39.308 1.00 74.76 O
ATOM 13 C1' A A 416 -15.175 61.447 39.142 1.00 75.21 C
ATOM 14 N9 A A 416 -16.307 60.867 38.396 1.00 75.43 N
ATOM 15 C8 A A 416 -16.768 61.334 37.198 1.00 76.25 C
ATOM 16 N7 A A 416 -17.776 60.668 36.691 1.00 76.35 N
ATOM 17 C5 A A 416 -18.014 59.683 37.611 1.00 75.53 C
ATOM 18 C6 A A 416 -18.969 58.652 37.626 1.00 75.25 C
ATOM 19 N6 A A 416 -19.884 58.461 36.663 1.00 75.79 N
ATOM 20 N1 A A 416 -18.959 57.809 38.687 1.00 74.43 N
ATOM 21 C2 A A 416 -18.050 58.027 39.658 1.00 73.94 C
ATOM 22 N3 A A 416 -17.104 58.970 39.737 1.00 74.15 N
ATOM 23 C4 A A 416 -17.129 59.787 38.669 1.00 74.96 C
ATOM 24 P G A 417 -12.126 62.666 41.059 1.00 75.26 P
ATOM 25 OP1 G A 417 -10.821 62.383 41.699 1.00 74.93 O
ATOM 26 OP2 G A 417 -13.314 61.867 41.488 1.00 74.73 O
ATOM 27 O5' G A 417 -12.434 64.224 41.170 1.00 75.70 O
TER

ATOM 1 O3' C B 414 -20.955 62.190 33.446 1.00 81.50 O
ATOM 2 P A B 415 -19.969 61.097 32.802 1.00 87.54 P
ATOM 3 OP1 A B 415 -20.521 60.744 31.462 1.00 88.33 O
ATOM 4 OP2 A B 415 -19.769 60.009 33.817 1.00 86.56 O
ATOM 5 O5' A B 415 -18.636 61.909 32.620 1.00 87.85 O
ATOM 6 C5' A B 415 -17.752 62.099 33.698 1.00 87.20 C
ATOM 7 C4' A B 415 -16.827 63.223 33.397 1.00 87.74 C
ATOM 8 O4' A B 415 -17.320 63.904 32.230 1.00 88.72 O
ATOM 9 C3' A B 415 -16.728 64.273 34.473 1.00 87.43 C
ATOM 10 O3' A B 415 -15.470 64.898 34.363 1.00 87.71 O
ATOM 11 C2' A B 415 -17.815 65.251 34.082 1.00 88.04 C
ATOM 12 O2' A B 415 -17.629 66.557 34.574 1.00 88.22 O
ATOM 13 C1' A B 415 -17.729 65.207 32.568 1.00 88.97 C
ATOM 14 N9 A B 415 -19.001 65.449 31.908 1.00 89.54 N
ATOM 15 C8 A B 415 -20.181 64.789 32.127 1.00 89.23 C
ATOM 16 N7 A B 415 -21.146 65.234 31.359 1.00 89.96 N
ATOM 17 C5 A B 415 -20.544 66.240 30.591 1.00 90.80 C
ATOM 18 C6 A B 415 -21.022 67.099 29.587 1.00 91.84 C
ATOM 19 N6 A B 415 -22.279 67.104 29.159 1.00 92.25 N
ATOM 20 N1 A B 415 -20.145 67.962 29.032 1.00 92.49 N
ATOM 21 C2 A B 415 -18.873 67.977 29.460 1.00 92.12 C
ATOM 22 N3 A B 415 -18.302 67.229 30.393 1.00 91.17 N
ATOM 23 C4 A B 415 -19.208 66.378 30.922 1.00 90.54 C
ATOM 24 P A B 416 -14.161 64.154 34.911 1.00 78.51 P
ATOM 25 OP1 A B 416 -13.109 65.209 35.055 1.00 78.82 O
ATOM 26 OP2 A B 416 -13.906 63.003 34.012 1.00 78.67 O
ATOM 27 O5' A B 416 -14.609 63.619 36.360 1.00 77.47 O
TER

Atoms:
OP1: (-13.109,65.209,35.055)
OP2: (-13.906,63.003,34.012)
C3': (-13.036,62.402,38.507)
C1': (-15.175,61.447,39.142)
C5': (-14.326,64.378,37.542)
O4': (-15.309,62.846,39.085)
C8: (-16.768,61.334,37.198)
O2': (-13.172,60.077,39.308)
C6: (-18.969,58.652,37.626)
C5: (-18.014,59.683,37.611)
C4: (-17.129,59.787,38.669)
P: (-14.161,64.154,34.911)
C4': (-14.069,63.494,38.737)
C2': (-13.807,61.080,38.554)
C2: (-18.050,58.027,39.658)
N1: (-18.959,57.809,38.687)
N3: (-17.104,58.970,39.737)
N6: (-19.884,58.461,36.663)
N7: (-17.776,60.668,36.691)
N9: (-16.307,60.867,38.396)
O5': (-14.609,63.619,36.360)
O3': (-11.933,62.435,39.468)
OP1: (-20.521,60.744,31.462)
OP2: (-19.769,60.009,33.817)
C3': (-16.728,64.273,34.473)
C1': (-17.729,65.207,32.568)
C5': (-17.752,62.099,33.698)
O4': (-17.320,63.904,32.230)
C8: (-20.181,64.789,32.127)
O2': (-17.629,66.557,34.574)
C6: (-21.022,67.099,29.587)
C5: (-20.544,66.240,30.591)
C4: (-19.208,66.378,30.922)
P: (-19.969,61.097,32.802)
C4': (-16.827,63.223,33.397)
C2': (-17.815,65.251,34.082)
C2: (-18.873,67.977,29.460)
N1: (-20.145,67.962,29.032)
N3: (-18.302,67.229,30.393)
N6: (-22.279,67.104,29.159)
N7: (-21.146,65.234,31.359)
N9: (-19.001,65.449,31.908)
O5': (-18.636,61.909,32.620)
O3': (-15.470,64.898,34.363)
Image (generated by PyMOL):
PyMOL image
show in jmol