Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11952:11951
Extra
PDB:
ATOM 1 O3' A A1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 2 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 3 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 4 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 5 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
ATOM 6 C5' A A1952 3.376 6.370 87.565 1.00 39.39 C
ATOM 7 C4' A A1952 4.707 5.945 88.089 1.00 39.18 C
ATOM 8 O4' A A1952 5.733 6.891 87.657 1.00 39.08 O
ATOM 9 C3' A A1952 4.796 5.896 89.601 1.00 39.35 C
ATOM 10 O3' A A1952 4.502 4.602 90.075 1.00 39.32 O
ATOM 11 C2' A A1952 6.236 6.351 89.890 1.00 39.22 C
ATOM 12 O2' A A1952 7.150 5.265 89.773 1.00 38.94 O
ATOM 13 C1' A A1952 6.501 7.313 88.743 1.00 39.14 C
ATOM 14 N9 A A1952 6.112 8.704 89.062 1.00 39.42 N
ATOM 15 C8 A A1952 5.352 9.495 88.260 1.00 39.54 C
ATOM 16 N7 A A1952 5.178 10.693 88.723 1.00 39.79 N
ATOM 17 C5 A A1952 5.874 10.704 89.897 1.00 39.84 C
ATOM 18 C6 A A1952 6.071 11.674 90.871 1.00 40.08 C
ATOM 19 N6 A A1952 5.559 12.872 90.783 1.00 40.33 N
ATOM 20 N1 A A1952 6.807 11.405 91.963 1.00 40.09 N
ATOM 21 C2 A A1952 7.359 10.214 92.079 1.00 39.85 C
ATOM 22 N3 A A1952 7.238 9.217 91.226 1.00 39.61 N
ATOM 23 C4 A A1952 6.470 9.506 90.135 1.00 39.61 C
ATOM 24 P C A1953 3.764 4.379 91.444 1.00 33.15 P
ATOM 25 OP1 C A1953 3.529 2.946 91.594 1.00 33.07 O
ATOM 26 OP2 C A1953 2.654 5.255 91.439 1.00 33.43 O
ATOM 27 O5' C A1953 4.807 4.883 92.503 1.00 33.19 O
TER
ATOM 1 O3' A B1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 2 P A B1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A B1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A B1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A B1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A B1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A B1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A B1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A B1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A B1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A B1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A B1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A B1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A B1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A B1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A B1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A B1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A B1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A B1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A B1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A B1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A B1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A B1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A B1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A B1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A B1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A B1952 2.913 7.520 88.253 1.00 39.69 O
TER
ATOM 2 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 3 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 4 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 5 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
ATOM 6 C5' A A1952 3.376 6.370 87.565 1.00 39.39 C
ATOM 7 C4' A A1952 4.707 5.945 88.089 1.00 39.18 C
ATOM 8 O4' A A1952 5.733 6.891 87.657 1.00 39.08 O
ATOM 9 C3' A A1952 4.796 5.896 89.601 1.00 39.35 C
ATOM 10 O3' A A1952 4.502 4.602 90.075 1.00 39.32 O
ATOM 11 C2' A A1952 6.236 6.351 89.890 1.00 39.22 C
ATOM 12 O2' A A1952 7.150 5.265 89.773 1.00 38.94 O
ATOM 13 C1' A A1952 6.501 7.313 88.743 1.00 39.14 C
ATOM 14 N9 A A1952 6.112 8.704 89.062 1.00 39.42 N
ATOM 15 C8 A A1952 5.352 9.495 88.260 1.00 39.54 C
ATOM 16 N7 A A1952 5.178 10.693 88.723 1.00 39.79 N
ATOM 17 C5 A A1952 5.874 10.704 89.897 1.00 39.84 C
ATOM 18 C6 A A1952 6.071 11.674 90.871 1.00 40.08 C
ATOM 19 N6 A A1952 5.559 12.872 90.783 1.00 40.33 N
ATOM 20 N1 A A1952 6.807 11.405 91.963 1.00 40.09 N
ATOM 21 C2 A A1952 7.359 10.214 92.079 1.00 39.85 C
ATOM 22 N3 A A1952 7.238 9.217 91.226 1.00 39.61 N
ATOM 23 C4 A A1952 6.470 9.506 90.135 1.00 39.61 C
ATOM 24 P C A1953 3.764 4.379 91.444 1.00 33.15 P
ATOM 25 OP1 C A1953 3.529 2.946 91.594 1.00 33.07 O
ATOM 26 OP2 C A1953 2.654 5.255 91.439 1.00 33.43 O
ATOM 27 O5' C A1953 4.807 4.883 92.503 1.00 33.19 O
TER
ATOM 1 O3' A B1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 2 P A B1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A B1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A B1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A B1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A B1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A B1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A B1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A B1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A B1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A B1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A B1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A B1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A B1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A B1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A B1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A B1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A B1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A B1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A B1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A B1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A B1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A B1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A B1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A B1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A B1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A B1952 2.913 7.520 88.253 1.00 39.69 O
TER
Atoms:
OP1: (0.579,6.571,88.251)
OP2: (1.114,8.780,89.471)
C3': (4.796,5.896,89.601)
C1': (6.501,7.313,88.743)
C5': (3.376,6.370,87.565)
O4': (5.733,6.891,87.657)
C8: (5.352,9.495,88.260)
O2': (7.150,5.265,89.773)
C6: (6.071,11.674,90.871)
C5: (5.874,10.704,89.897)
C4: (6.470,9.506,90.135)
P: (1.368,7.850,88.349)
C4': (4.707,5.945,88.089)
C2': (6.236,6.351,89.890)
C2: (7.359,10.214,92.079)
N1: (6.807,11.405,91.963)
N3: (7.238,9.217,91.226)
N6: (5.559,12.872,90.783)
N7: (5.178,10.693,88.723)
N9: (6.112,8.704,89.062)
O5': (2.913,7.520,88.253)
O3': (4.502,4.602,90.075)
OP2: (1.114,8.780,89.471)
C3': (4.796,5.896,89.601)
C1': (6.501,7.313,88.743)
C5': (3.376,6.370,87.565)
O4': (5.733,6.891,87.657)
C8: (5.352,9.495,88.260)
O2': (7.150,5.265,89.773)
C6: (6.071,11.674,90.871)
C5: (5.874,10.704,89.897)
C4: (6.470,9.506,90.135)
P: (1.368,7.850,88.349)
C4': (4.707,5.945,88.089)
C2': (6.236,6.351,89.890)
C2: (7.359,10.214,92.079)
N1: (6.807,11.405,91.963)
N3: (7.238,9.217,91.226)
N6: (5.559,12.872,90.783)
N7: (5.178,10.693,88.723)
N9: (6.112,8.704,89.062)
O5': (2.913,7.520,88.253)
O3': (4.502,4.602,90.075)
OP1: (1.581,15.021,87.761)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
Image (generated by PyMOL):