ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C49:C50

Extra

PDB:
ATOM 1 O3' A A 48 -13.297 48.437 35.321 1.00 75.93 O
ATOM 2 P A A 49 -13.562 46.875 35.083 1.00 80.50 P
ATOM 3 OP1 A A 49 -14.458 46.387 36.160 1.00 70.46 O
ATOM 4 OP2 A A 49 -12.248 46.226 34.876 1.00 60.51 O
ATOM 5 O5' A A 49 -14.347 46.855 33.686 1.00 58.26 O
ATOM 6 C5' A A 49 -15.567 47.574 33.519 1.00 53.57 C
ATOM 7 C4' A A 49 -15.797 47.915 32.056 1.00 62.85 C
ATOM 8 O4' A A 49 -14.766 48.831 31.616 1.00 66.65 O
ATOM 9 C3' A A 49 -15.742 46.729 31.099 1.00 72.24 C
ATOM 10 O3' A A 49 -17.064 46.254 30.855 1.00 80.55 O
ATOM 11 C2' A A 49 -15.112 47.295 29.825 1.00 67.12 C
ATOM 12 O2' A A 49 -16.073 47.704 28.871 1.00 73.88 O
ATOM 13 C1' A A 49 -14.323 48.507 30.313 1.00 66.61 C
ATOM 14 N9 A A 49 -12.882 48.282 30.364 1.00 66.41 N
ATOM 15 C8 A A 49 -12.196 47.536 31.280 1.00 63.58 C
ATOM 16 N7 A A 49 -10.900 47.516 31.078 1.00 68.30 N
ATOM 17 C5 A A 49 -10.726 48.305 29.953 1.00 72.27 C
ATOM 18 C6 A A 49 -9.581 48.684 29.225 1.00 76.63 C
ATOM 19 N6 A A 49 -8.344 48.294 29.546 1.00 84.64 N
ATOM 20 N1 A A 49 -9.755 49.482 28.152 1.00 76.20 N
ATOM 21 C2 A A 49 -10.995 49.870 27.834 1.00 75.07 C
ATOM 22 N3 A A 49 -12.145 49.579 28.439 1.00 73.56 N
ATOM 23 C4 A A 49 -11.938 48.786 29.501 1.00 71.52 C
ATOM 24 P G A 50 -17.304 44.764 30.323 1.00 66.22 P
ATOM 25 OP1 G A 50 -18.714 44.407 30.594 1.00 77.10 O
ATOM 26 OP2 G A 50 -16.221 43.913 30.863 1.00 56.70 O
ATOM 27 O5' G A 50 -17.137 44.934 28.738 1.00 76.85 O
TER

ATOM 1 O3' A B 49 -17.064 46.254 30.855 1.00 80.55 O
ATOM 2 P G B 50 -17.304 44.764 30.323 1.00 66.22 P
ATOM 3 OP1 G B 50 -18.714 44.407 30.594 1.00 77.10 O
ATOM 4 OP2 G B 50 -16.221 43.913 30.863 1.00 56.70 O
ATOM 5 O5' G B 50 -17.137 44.934 28.738 1.00 76.85 O
ATOM 6 C5' G B 50 -17.247 43.819 27.856 1.00 69.84 C
ATOM 7 C4' G B 50 -15.876 43.348 27.404 1.00 62.20 C
ATOM 8 O4' G B 50 -15.132 42.918 28.573 1.00 52.69 O
ATOM 9 C3' G B 50 -15.876 42.146 26.462 1.00 63.68 C
ATOM 10 O3' G B 50 -14.730 42.160 25.618 1.00 52.47 O
ATOM 11 C2' G B 50 -15.787 40.993 27.449 1.00 59.09 C
ATOM 12 O2' G B 50 -15.302 39.804 26.860 1.00 59.93 O
ATOM 13 C1' G B 50 -14.743 41.575 28.387 1.00 58.24 C
ATOM 14 N9 G B 50 -14.672 40.886 29.668 1.00 50.99 N
ATOM 15 C8 G B 50 -15.703 40.314 30.372 1.00 55.97 C
ATOM 16 N7 G B 50 -15.323 39.757 31.488 1.00 49.00 N
ATOM 17 C5 G B 50 -13.952 39.975 31.521 1.00 49.12 C
ATOM 18 C6 G B 50 -12.995 39.598 32.489 1.00 53.49 C
ATOM 19 O6 G B 50 -13.184 38.979 33.545 1.00 58.11 O
ATOM 20 N1 G B 50 -11.714 40.016 32.134 1.00 49.21 N
ATOM 21 C2 G B 50 -11.400 40.708 30.988 1.00 54.84 C
ATOM 22 N2 G B 50 -10.109 41.026 30.814 1.00 62.82 N
ATOM 23 N3 G B 50 -12.287 41.066 30.071 1.00 54.56 N
ATOM 24 C4 G B 50 -13.536 40.666 30.407 1.00 49.97 C
ATOM 25 P G B 51 -14.827 42.786 24.151 1.00 59.05 P
ATOM 26 OP1 G B 51 -13.479 42.740 23.543 1.00 69.38 O
ATOM 27 OP2 G B 51 -15.562 44.066 24.241 1.00 71.95 O
ATOM 28 O5' G B 51 -15.767 41.746 23.389 1.00 62.85 O
TER

Atoms:
OP1: (-14.458,46.387,36.160)
OP2: (-12.248,46.226,34.876)
C3': (-15.742,46.729,31.099)
C1': (-14.323,48.507,30.313)
C5': (-15.567,47.574,33.519)
O4': (-14.766,48.831,31.616)
C8: (-12.196,47.536,31.280)
O2': (-16.073,47.704,28.871)
C6: (-9.581,48.684,29.225)
C5: (-10.726,48.305,29.953)
C4: (-11.938,48.786,29.501)
P: (-13.562,46.875,35.083)
C4': (-15.797,47.915,32.056)
C2': (-15.112,47.295,29.825)
C2: (-10.995,49.870,27.834)
N1: (-9.755,49.482,28.152)
N3: (-12.145,49.579,28.439)
N6: (-8.344,48.294,29.546)
N7: (-10.900,47.516,31.078)
N9: (-12.882,48.282,30.364)
O5': (-14.347,46.855,33.686)
O3': (-17.064,46.254,30.855)
OP1: (-18.714,44.407,30.594)
OP2: (-16.221,43.913,30.863)
C3': (-15.876,42.146,26.462)
C1': (-14.743,41.575,28.387)
C5': (-17.247,43.819,27.856)
O6: (-13.184,38.979,33.545)
O4': (-15.132,42.918,28.573)
C8: (-15.703,40.314,30.372)
C2: (-11.400,40.708,30.988)
C6: (-12.995,39.598,32.489)
C5: (-13.952,39.975,31.521)
C4: (-13.536,40.666,30.407)
P: (-17.304,44.764,30.323)
C4': (-15.876,43.348,27.404)
C2': (-15.787,40.993,27.449)
O2': (-15.302,39.804,26.860)
N1: (-11.714,40.016,32.134)
N2: (-10.109,41.026,30.814)
N3: (-12.287,41.066,30.071)
N7: (-15.323,39.757,31.488)
N9: (-14.672,40.886,29.668)
O5': (-17.137,44.934,28.738)
O3': (-14.730,42.160,25.618)
Image (generated by PyMOL):
PyMOL image
show in jmol