ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:E49:E50

Extra

PDB:
ATOM 1 O3' A A 48 56.795 -15.157 -48.778 1.00 99.65 O
ATOM 2 P A A 49 57.216 -15.384 -47.251 1.00107.44 P
ATOM 3 OP1 A A 49 58.146 -16.534 -47.186 1.00 98.44 O
ATOM 4 OP2 A A 49 55.978 -15.394 -46.438 1.00 98.71 O
ATOM 5 O5' A A 49 58.019 -14.040 -46.928 1.00 93.16 O
ATOM 6 C5' A A 49 59.138 -13.684 -47.729 1.00 93.12 C
ATOM 7 C4' A A 49 59.379 -12.188 -47.664 1.00 97.45 C
ATOM 8 O4' A A 49 58.306 -11.503 -48.352 1.00 95.81 O
ATOM 9 C3' A A 49 59.406 -11.618 -46.254 1.00 98.80 C
ATOM 10 O3' A A 49 60.752 -11.547 -45.807 1.00106.02 O
ATOM 11 C2' A A 49 58.806 -10.222 -46.400 1.00 95.50 C
ATOM 12 O2' A A 49 59.796 -9.225 -46.564 1.00 99.84 O
ATOM 13 C1' A A 49 57.948 -10.321 -47.661 1.00102.65 C
ATOM 14 N9 A A 49 56.513 -10.367 -47.388 1.00106.46 N
ATOM 15 C8 A A 49 55.805 -11.407 -46.854 1.00 94.76 C
ATOM 16 N7 A A 49 54.523 -11.160 -46.726 1.00 96.16 N
ATOM 17 C5 A A 49 54.378 -9.870 -47.210 1.00100.60 C
ATOM 18 C6 A A 49 53.259 -9.021 -47.348 1.00 99.80 C
ATOM 19 N6 A A 49 52.018 -9.369 -46.992 1.00 94.20 N
ATOM 20 N1 A A 49 53.465 -7.794 -47.869 1.00 97.84 N
ATOM 21 C2 A A 49 54.707 -7.444 -48.225 1.00 99.57 C
ATOM 22 N3 A A 49 55.833 -8.151 -48.144 1.00100.01 N
ATOM 23 C4 A A 49 55.597 -9.366 -47.623 1.00103.70 C
ATOM 24 P G A 50 61.060 -11.396 -44.247 1.00113.35 P
ATOM 25 OP1 G A 50 62.497 -11.684 -44.035 1.00105.43 O
ATOM 26 OP2 G A 50 60.041 -12.187 -43.522 1.00 90.52 O
ATOM 27 O5' G A 50 60.823 -9.831 -43.993 1.00 99.37 O
TER

ATOM 1 O3' A B 49 60.752 -11.547 -45.807 1.00106.02 O
ATOM 2 P G B 50 61.060 -11.396 -44.247 1.00113.35 P
ATOM 3 OP1 G B 50 62.497 -11.684 -44.035 1.00105.43 O
ATOM 4 OP2 G B 50 60.041 -12.187 -43.522 1.00 90.52 O
ATOM 5 O5' G B 50 60.823 -9.831 -43.993 1.00 99.37 O
ATOM 6 C5' G B 50 60.842 -9.282 -42.674 1.00 95.24 C
ATOM 7 C4' G B 50 59.439 -9.200 -42.091 1.00 82.35 C
ATOM 8 O4' G B 50 58.919 -10.540 -41.888 1.00 81.07 O
ATOM 9 C3' G B 50 59.325 -8.485 -40.743 1.00 73.61 C
ATOM 10 O3' G B 50 58.239 -7.565 -40.771 1.00 70.95 O
ATOM 11 C2' G B 50 59.041 -9.625 -39.773 1.00 68.85 C
ATOM 12 O2' G B 50 58.253 -9.219 -38.674 1.00 79.77 O
ATOM 13 C1' G B 50 58.235 -10.559 -40.658 1.00 74.76 C
ATOM 14 N9 G B 50 58.163 -11.921 -40.142 1.00 69.06 N
ATOM 15 C8 G B 50 59.164 -12.633 -39.528 1.00 67.31 C
ATOM 16 N7 G B 50 58.799 -13.832 -39.167 1.00 63.50 N
ATOM 17 C5 G B 50 57.472 -13.919 -39.565 1.00 66.90 C
ATOM 18 C6 G B 50 56.550 -14.984 -39.438 1.00 70.90 C
ATOM 19 O6 G B 50 56.734 -16.100 -38.931 1.00 68.26 O
ATOM 20 N1 G B 50 55.308 -14.652 -39.976 1.00 70.42 N
ATOM 21 C2 G B 50 54.998 -13.446 -40.561 1.00 68.77 C
ATOM 22 N2 G B 50 53.745 -13.312 -41.021 1.00 69.03 N
ATOM 23 N3 G B 50 55.853 -12.440 -40.685 1.00 62.04 N
ATOM 24 C4 G B 50 57.065 -12.749 -40.167 1.00 65.49 C
ATOM 25 P G B 51 58.433 -6.013 -40.420 1.00 79.12 P
ATOM 26 OP1 G B 51 57.164 -5.531 -39.835 1.00 77.66 O
ATOM 27 OP2 G B 51 58.974 -5.358 -41.631 1.00 84.46 O
ATOM 28 O5' G B 51 59.552 -5.977 -39.274 1.00 72.92 O
TER

Atoms:
OP1: (58.146,-16.534,-47.186)
OP2: (55.978,-15.394,-46.438)
C3': (59.406,-11.618,-46.254)
C1': (57.948,-10.321,-47.661)
C5': (59.138,-13.684,-47.729)
O4': (58.306,-11.503,-48.352)
C8: (55.805,-11.407,-46.854)
O2': (59.796,-9.225,-46.564)
C6: (53.259,-9.021,-47.348)
C5: (54.378,-9.870,-47.210)
C4: (55.597,-9.366,-47.623)
P: (57.216,-15.384,-47.251)
C4': (59.379,-12.188,-47.664)
C2': (58.806,-10.222,-46.400)
C2: (54.707,-7.444,-48.225)
N1: (53.465,-7.794,-47.869)
N3: (55.833,-8.151,-48.144)
N6: (52.018,-9.369,-46.992)
N7: (54.523,-11.160,-46.726)
N9: (56.513,-10.367,-47.388)
O5': (58.019,-14.040,-46.928)
O3': (60.752,-11.547,-45.807)
OP1: (62.497,-11.684,-44.035)
OP2: (60.041,-12.187,-43.522)
C3': (59.325,-8.485,-40.743)
C1': (58.235,-10.559,-40.658)
C5': (60.842,-9.282,-42.674)
O6: (56.734,-16.100,-38.931)
O4': (58.919,-10.540,-41.888)
C8: (59.164,-12.633,-39.528)
C2: (54.998,-13.446,-40.561)
C6: (56.550,-14.984,-39.438)
C5: (57.472,-13.919,-39.565)
C4: (57.065,-12.749,-40.167)
P: (61.060,-11.396,-44.247)
C4': (59.439,-9.200,-42.091)
C2': (59.041,-9.625,-39.773)
O2': (58.253,-9.219,-38.674)
N1: (55.308,-14.652,-39.976)
N2: (53.745,-13.312,-41.021)
N3: (55.853,-12.440,-40.685)
N7: (58.799,-13.832,-39.167)
N9: (58.163,-11.921,-40.142)
O5': (60.823,-9.831,-43.993)
O3': (58.239,-7.565,-40.771)
Image (generated by PyMOL):
PyMOL image
show in jmol