Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2345:A2352
Extra
PDB:
ATOM 1 O3' A A2344 70.048 90.971 146.671 1.00 66.95 O
ATOM 2 P A A2345 70.725 90.586 148.057 1.00 70.60 P
ATOM 3 OP1 A A2345 69.886 89.497 148.631 1.00 70.35 O
ATOM 4 OP2 A A2345 70.920 91.846 148.826 1.00 70.14 O
ATOM 5 O5' A A2345 72.134 89.987 147.622 1.00 69.96 O
ATOM 6 C5' A A2345 72.225 88.681 147.034 1.00 69.02 C
ATOM 7 C4' A A2345 73.357 88.629 146.052 1.00 68.99 C
ATOM 8 O4' A A2345 73.093 89.529 144.950 1.00 66.42 O
ATOM 9 C3' A A2345 74.682 89.121 146.591 1.00 71.12 C
ATOM 10 O3' A A2345 75.320 88.163 147.419 1.00 74.13 O
ATOM 11 C2' A A2345 75.451 89.457 145.320 1.00 70.25 C
ATOM 12 O2' A A2345 76.085 88.346 144.703 1.00 71.23 O
ATOM 13 C1' A A2345 74.326 90.014 144.442 1.00 67.15 C
ATOM 14 N9 A A2345 74.285 91.473 144.424 1.00 64.69 N
ATOM 15 C8 A A2345 73.360 92.312 144.988 1.00 64.71 C
ATOM 16 N7 A A2345 73.605 93.582 144.778 1.00 64.15 N
ATOM 17 C5 A A2345 74.769 93.576 144.027 1.00 63.59 C
ATOM 18 C6 A A2345 75.537 94.611 143.479 1.00 63.52 C
ATOM 19 N6 A A2345 75.227 95.900 143.604 1.00 63.83 N
ATOM 20 N1 A A2345 76.643 94.273 142.786 1.00 64.44 N
ATOM 21 C2 A A2345 76.940 92.974 142.656 1.00 65.41 C
ATOM 22 N3 A A2345 76.289 91.908 143.120 1.00 64.47 N
ATOM 23 C4 A A2345 75.201 92.285 143.805 1.00 64.12 C
ATOM 24 P G A2346 75.798 88.597 148.883 1.00 76.27 P
ATOM 25 OP1 G A2346 76.679 87.510 149.385 1.00 77.16 O
ATOM 26 OP2 G A2346 74.603 89.002 149.664 1.00 75.44 O
ATOM 27 O5' G A2346 76.710 89.872 148.603 1.00 74.54 O
TER
ATOM 1 O3' C B2351 72.420 94.644 157.389 1.00102.36 O
ATOM 2 P A B2352 72.182 93.656 156.151 1.00104.03 P
ATOM 3 OP1 A B2352 70.721 93.444 155.963 1.00103.85 O
ATOM 4 OP2 A B2352 73.094 92.484 156.268 1.00103.73 O
ATOM 5 O5' A B2352 72.687 94.493 154.906 1.00103.32 O
ATOM 6 C5' A B2352 72.411 94.028 153.600 1.00102.71 C
ATOM 7 C4' A B2352 72.664 95.112 152.606 1.00101.39 C
ATOM 8 O4' A B2352 72.405 94.573 151.285 1.00102.04 O
ATOM 9 C3' A B2352 71.760 96.328 152.748 1.00100.07 C
ATOM 10 O3' A B2352 72.301 97.285 153.670 1.00 96.18 O
ATOM 11 C2' A B2352 71.673 96.814 151.308 1.00101.71 C
ATOM 12 O2' A B2352 72.837 97.505 150.898 1.00102.92 O
ATOM 13 C1' A B2352 71.603 95.479 150.557 1.00102.41 C
ATOM 14 N9 A B2352 70.252 94.921 150.499 1.00102.94 N
ATOM 15 C8 A B2352 69.714 93.923 151.285 1.00102.62 C
ATOM 16 N7 A B2352 68.466 93.645 151.003 1.00103.20 N
ATOM 17 C5 A B2352 68.159 94.511 149.960 1.00103.92 C
ATOM 18 C6 A B2352 66.989 94.708 149.215 1.00104.16 C
ATOM 19 N6 A B2352 65.865 94.015 149.416 1.00104.58 N
ATOM 20 N1 A B2352 67.012 95.653 148.242 1.00103.94 N
ATOM 21 C2 A B2352 68.144 96.344 148.042 1.00103.13 C
ATOM 22 N3 A B2352 69.309 96.249 148.676 1.00102.95 N
ATOM 23 C4 A B2352 69.251 95.302 149.637 1.00103.54 C
ATOM 24 P U B2353 71.324 98.082 154.677 1.00 93.53 P
ATOM 25 OP1 U B2353 72.163 98.973 155.511 1.00 91.86 O
ATOM 26 OP2 U B2353 70.428 97.097 155.335 1.00 93.96 O
ATOM 27 O5' U B2353 70.445 98.998 153.714 1.00 93.22 O
TER
ATOM 2 P A A2345 70.725 90.586 148.057 1.00 70.60 P
ATOM 3 OP1 A A2345 69.886 89.497 148.631 1.00 70.35 O
ATOM 4 OP2 A A2345 70.920 91.846 148.826 1.00 70.14 O
ATOM 5 O5' A A2345 72.134 89.987 147.622 1.00 69.96 O
ATOM 6 C5' A A2345 72.225 88.681 147.034 1.00 69.02 C
ATOM 7 C4' A A2345 73.357 88.629 146.052 1.00 68.99 C
ATOM 8 O4' A A2345 73.093 89.529 144.950 1.00 66.42 O
ATOM 9 C3' A A2345 74.682 89.121 146.591 1.00 71.12 C
ATOM 10 O3' A A2345 75.320 88.163 147.419 1.00 74.13 O
ATOM 11 C2' A A2345 75.451 89.457 145.320 1.00 70.25 C
ATOM 12 O2' A A2345 76.085 88.346 144.703 1.00 71.23 O
ATOM 13 C1' A A2345 74.326 90.014 144.442 1.00 67.15 C
ATOM 14 N9 A A2345 74.285 91.473 144.424 1.00 64.69 N
ATOM 15 C8 A A2345 73.360 92.312 144.988 1.00 64.71 C
ATOM 16 N7 A A2345 73.605 93.582 144.778 1.00 64.15 N
ATOM 17 C5 A A2345 74.769 93.576 144.027 1.00 63.59 C
ATOM 18 C6 A A2345 75.537 94.611 143.479 1.00 63.52 C
ATOM 19 N6 A A2345 75.227 95.900 143.604 1.00 63.83 N
ATOM 20 N1 A A2345 76.643 94.273 142.786 1.00 64.44 N
ATOM 21 C2 A A2345 76.940 92.974 142.656 1.00 65.41 C
ATOM 22 N3 A A2345 76.289 91.908 143.120 1.00 64.47 N
ATOM 23 C4 A A2345 75.201 92.285 143.805 1.00 64.12 C
ATOM 24 P G A2346 75.798 88.597 148.883 1.00 76.27 P
ATOM 25 OP1 G A2346 76.679 87.510 149.385 1.00 77.16 O
ATOM 26 OP2 G A2346 74.603 89.002 149.664 1.00 75.44 O
ATOM 27 O5' G A2346 76.710 89.872 148.603 1.00 74.54 O
TER
ATOM 1 O3' C B2351 72.420 94.644 157.389 1.00102.36 O
ATOM 2 P A B2352 72.182 93.656 156.151 1.00104.03 P
ATOM 3 OP1 A B2352 70.721 93.444 155.963 1.00103.85 O
ATOM 4 OP2 A B2352 73.094 92.484 156.268 1.00103.73 O
ATOM 5 O5' A B2352 72.687 94.493 154.906 1.00103.32 O
ATOM 6 C5' A B2352 72.411 94.028 153.600 1.00102.71 C
ATOM 7 C4' A B2352 72.664 95.112 152.606 1.00101.39 C
ATOM 8 O4' A B2352 72.405 94.573 151.285 1.00102.04 O
ATOM 9 C3' A B2352 71.760 96.328 152.748 1.00100.07 C
ATOM 10 O3' A B2352 72.301 97.285 153.670 1.00 96.18 O
ATOM 11 C2' A B2352 71.673 96.814 151.308 1.00101.71 C
ATOM 12 O2' A B2352 72.837 97.505 150.898 1.00102.92 O
ATOM 13 C1' A B2352 71.603 95.479 150.557 1.00102.41 C
ATOM 14 N9 A B2352 70.252 94.921 150.499 1.00102.94 N
ATOM 15 C8 A B2352 69.714 93.923 151.285 1.00102.62 C
ATOM 16 N7 A B2352 68.466 93.645 151.003 1.00103.20 N
ATOM 17 C5 A B2352 68.159 94.511 149.960 1.00103.92 C
ATOM 18 C6 A B2352 66.989 94.708 149.215 1.00104.16 C
ATOM 19 N6 A B2352 65.865 94.015 149.416 1.00104.58 N
ATOM 20 N1 A B2352 67.012 95.653 148.242 1.00103.94 N
ATOM 21 C2 A B2352 68.144 96.344 148.042 1.00103.13 C
ATOM 22 N3 A B2352 69.309 96.249 148.676 1.00102.95 N
ATOM 23 C4 A B2352 69.251 95.302 149.637 1.00103.54 C
ATOM 24 P U B2353 71.324 98.082 154.677 1.00 93.53 P
ATOM 25 OP1 U B2353 72.163 98.973 155.511 1.00 91.86 O
ATOM 26 OP2 U B2353 70.428 97.097 155.335 1.00 93.96 O
ATOM 27 O5' U B2353 70.445 98.998 153.714 1.00 93.22 O
TER
Atoms:
OP1: (69.886,89.497,148.631)
OP2: (70.920,91.846,148.826)
C3': (74.682,89.121,146.591)
C1': (74.326,90.014,144.442)
C5': (72.225,88.681,147.034)
O4': (73.093,89.529,144.950)
C8: (73.360,92.312,144.988)
O2': (76.085,88.346,144.703)
C6: (75.537,94.611,143.479)
C5: (74.769,93.576,144.027)
C4: (75.201,92.285,143.805)
P: (70.725,90.586,148.057)
C4': (73.357,88.629,146.052)
C2': (75.451,89.457,145.320)
C2: (76.940,92.974,142.656)
N1: (76.643,94.273,142.786)
N3: (76.289,91.908,143.120)
N6: (75.227,95.900,143.604)
N7: (73.605,93.582,144.778)
N9: (74.285,91.473,144.424)
O5': (72.134,89.987,147.622)
O3': (75.320,88.163,147.419)
OP2: (70.920,91.846,148.826)
C3': (74.682,89.121,146.591)
C1': (74.326,90.014,144.442)
C5': (72.225,88.681,147.034)
O4': (73.093,89.529,144.950)
C8: (73.360,92.312,144.988)
O2': (76.085,88.346,144.703)
C6: (75.537,94.611,143.479)
C5: (74.769,93.576,144.027)
C4: (75.201,92.285,143.805)
P: (70.725,90.586,148.057)
C4': (73.357,88.629,146.052)
C2': (75.451,89.457,145.320)
C2: (76.940,92.974,142.656)
N1: (76.643,94.273,142.786)
N3: (76.289,91.908,143.120)
N6: (75.227,95.900,143.604)
N7: (73.605,93.582,144.778)
N9: (74.285,91.473,144.424)
O5': (72.134,89.987,147.622)
O3': (75.320,88.163,147.419)
OP1: (70.721,93.444,155.963)
OP2: (73.094,92.484,156.268)
C3': (71.760,96.328,152.748)
C1': (71.603,95.479,150.557)
C5': (72.411,94.028,153.600)
O4': (72.405,94.573,151.285)
C8: (69.714,93.923,151.285)
O2': (72.837,97.505,150.898)
C6: (66.989,94.708,149.215)
C5: (68.159,94.511,149.960)
C4: (69.251,95.302,149.637)
P: (72.182,93.656,156.151)
C4': (72.664,95.112,152.606)
C2': (71.673,96.814,151.308)
C2: (68.144,96.344,148.042)
N1: (67.012,95.653,148.242)
N3: (69.309,96.249,148.676)
N6: (65.865,94.015,149.416)
N7: (68.466,93.645,151.003)
N9: (70.252,94.921,150.499)
O5': (72.687,94.493,154.906)
O3': (72.301,97.285,153.670)
OP2: (73.094,92.484,156.268)
C3': (71.760,96.328,152.748)
C1': (71.603,95.479,150.557)
C5': (72.411,94.028,153.600)
O4': (72.405,94.573,151.285)
C8: (69.714,93.923,151.285)
O2': (72.837,97.505,150.898)
C6: (66.989,94.708,149.215)
C5: (68.159,94.511,149.960)
C4: (69.251,95.302,149.637)
P: (72.182,93.656,156.151)
C4': (72.664,95.112,152.606)
C2': (71.673,96.814,151.308)
C2: (68.144,96.344,148.042)
N1: (67.012,95.653,148.242)
N3: (69.309,96.249,148.676)
N6: (65.865,94.015,149.416)
N7: (68.466,93.645,151.003)
N9: (70.252,94.921,150.499)
O5': (72.687,94.493,154.906)
O3': (72.301,97.285,153.670)
Image (generated by PyMOL):