Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02345:02352
Extra
PDB:
ATOM 1 O3' A A2344 69.879 90.823 146.339 1.00 68.59 O
ATOM 2 P A A2345 70.501 90.368 147.750 1.00 70.69 P
ATOM 3 OP1 A A2345 69.656 89.268 148.286 1.00 70.22 O
ATOM 4 OP2 A A2345 70.727 91.583 148.573 1.00 70.48 O
ATOM 5 O5' A A2345 71.911 89.754 147.345 1.00 70.14 O
ATOM 6 C5' A A2345 71.990 88.486 146.675 1.00 69.92 C
ATOM 7 C4' A A2345 73.135 88.483 145.694 1.00 70.33 C
ATOM 8 O4' A A2345 72.848 89.385 144.595 1.00 68.59 O
ATOM 9 C3' A A2345 74.461 89.003 146.217 1.00 72.06 C
ATOM 10 O3' A A2345 75.131 88.062 147.050 1.00 75.12 O
ATOM 11 C2' A A2345 75.206 89.318 144.924 1.00 70.66 C
ATOM 12 O2' A A2345 75.773 88.181 144.295 1.00 70.89 O
ATOM 13 C1' A A2345 74.071 89.873 144.058 1.00 68.11 C
ATOM 14 N9 A A2345 74.024 91.335 144.025 1.00 65.45 N
ATOM 15 C8 A A2345 73.090 92.175 144.584 1.00 65.47 C
ATOM 16 N7 A A2345 73.332 93.448 144.375 1.00 64.52 N
ATOM 17 C5 A A2345 74.503 93.448 143.629 1.00 62.60 C
ATOM 18 C6 A A2345 75.281 94.489 143.089 1.00 60.86 C
ATOM 19 N6 A A2345 74.981 95.778 143.222 1.00 61.04 N
ATOM 20 N1 A A2345 76.390 94.153 142.399 1.00 60.58 N
ATOM 21 C2 A A2345 76.691 92.854 142.264 1.00 62.32 C
ATOM 22 N3 A A2345 76.040 91.784 142.722 1.00 63.02 N
ATOM 23 C4 A A2345 74.941 92.155 143.405 1.00 63.96 C
ATOM 24 P G A2346 75.618 88.513 148.517 1.00 78.05 P
ATOM 25 OP1 G A2346 76.409 87.384 149.076 1.00 77.71 O
ATOM 26 OP2 G A2346 74.442 89.033 149.272 1.00 77.58 O
ATOM 27 O5' G A2346 76.613 89.722 148.223 1.00 76.03 O
TER
ATOM 1 O3' C B2351 72.199 94.450 156.925 1.00102.27 O
ATOM 2 P A B2352 71.951 93.525 155.632 1.00103.96 P
ATOM 3 OP1 A B2352 70.485 93.439 155.373 1.00102.80 O
ATOM 4 OP2 A B2352 72.741 92.277 155.804 1.00103.51 O
ATOM 5 O5' A B2352 72.618 94.343 154.442 1.00102.46 O
ATOM 6 C5' A B2352 72.455 93.911 153.090 1.00100.86 C
ATOM 7 C4' A B2352 72.612 95.074 152.150 1.00 99.19 C
ATOM 8 O4' A B2352 72.309 94.619 150.802 1.00 98.85 O
ATOM 9 C3' A B2352 71.670 96.245 152.403 1.00 98.01 C
ATOM 10 O3' A B2352 72.215 97.171 153.352 1.00 95.56 O
ATOM 11 C2' A B2352 71.502 96.823 151.005 1.00 98.77 C
ATOM 12 O2' A B2352 72.612 97.593 150.591 1.00 98.80 O
ATOM 13 C1' A B2352 71.442 95.542 150.170 1.00 98.71 C
ATOM 14 N9 A B2352 70.098 94.959 150.147 1.00 98.36 N
ATOM 15 C8 A B2352 69.574 94.001 150.985 1.00 98.08 C
ATOM 16 N7 A B2352 68.323 93.705 150.732 1.00 98.17 N
ATOM 17 C5 A B2352 68.001 94.516 149.651 1.00 98.33 C
ATOM 18 C6 A B2352 66.817 94.679 148.913 1.00 98.49 C
ATOM 19 N6 A B2352 65.688 94.007 149.165 1.00 98.22 N
ATOM 20 N1 A B2352 66.830 95.570 147.894 1.00 97.83 N
ATOM 21 C2 A B2352 67.961 96.246 147.645 1.00 97.37 C
ATOM 22 N3 A B2352 69.134 96.182 148.269 1.00 97.47 N
ATOM 23 C4 A B2352 69.087 95.288 149.275 1.00 98.24 C
ATOM 24 P U B2353 71.246 97.919 154.404 1.00 93.63 P
ATOM 25 OP1 U B2353 72.084 98.741 155.309 1.00 93.61 O
ATOM 26 OP2 U B2353 70.332 96.902 154.978 1.00 93.92 O
ATOM 27 O5' U B2353 70.378 98.914 153.513 1.00 93.73 O
TER
ATOM 2 P A A2345 70.501 90.368 147.750 1.00 70.69 P
ATOM 3 OP1 A A2345 69.656 89.268 148.286 1.00 70.22 O
ATOM 4 OP2 A A2345 70.727 91.583 148.573 1.00 70.48 O
ATOM 5 O5' A A2345 71.911 89.754 147.345 1.00 70.14 O
ATOM 6 C5' A A2345 71.990 88.486 146.675 1.00 69.92 C
ATOM 7 C4' A A2345 73.135 88.483 145.694 1.00 70.33 C
ATOM 8 O4' A A2345 72.848 89.385 144.595 1.00 68.59 O
ATOM 9 C3' A A2345 74.461 89.003 146.217 1.00 72.06 C
ATOM 10 O3' A A2345 75.131 88.062 147.050 1.00 75.12 O
ATOM 11 C2' A A2345 75.206 89.318 144.924 1.00 70.66 C
ATOM 12 O2' A A2345 75.773 88.181 144.295 1.00 70.89 O
ATOM 13 C1' A A2345 74.071 89.873 144.058 1.00 68.11 C
ATOM 14 N9 A A2345 74.024 91.335 144.025 1.00 65.45 N
ATOM 15 C8 A A2345 73.090 92.175 144.584 1.00 65.47 C
ATOM 16 N7 A A2345 73.332 93.448 144.375 1.00 64.52 N
ATOM 17 C5 A A2345 74.503 93.448 143.629 1.00 62.60 C
ATOM 18 C6 A A2345 75.281 94.489 143.089 1.00 60.86 C
ATOM 19 N6 A A2345 74.981 95.778 143.222 1.00 61.04 N
ATOM 20 N1 A A2345 76.390 94.153 142.399 1.00 60.58 N
ATOM 21 C2 A A2345 76.691 92.854 142.264 1.00 62.32 C
ATOM 22 N3 A A2345 76.040 91.784 142.722 1.00 63.02 N
ATOM 23 C4 A A2345 74.941 92.155 143.405 1.00 63.96 C
ATOM 24 P G A2346 75.618 88.513 148.517 1.00 78.05 P
ATOM 25 OP1 G A2346 76.409 87.384 149.076 1.00 77.71 O
ATOM 26 OP2 G A2346 74.442 89.033 149.272 1.00 77.58 O
ATOM 27 O5' G A2346 76.613 89.722 148.223 1.00 76.03 O
TER
ATOM 1 O3' C B2351 72.199 94.450 156.925 1.00102.27 O
ATOM 2 P A B2352 71.951 93.525 155.632 1.00103.96 P
ATOM 3 OP1 A B2352 70.485 93.439 155.373 1.00102.80 O
ATOM 4 OP2 A B2352 72.741 92.277 155.804 1.00103.51 O
ATOM 5 O5' A B2352 72.618 94.343 154.442 1.00102.46 O
ATOM 6 C5' A B2352 72.455 93.911 153.090 1.00100.86 C
ATOM 7 C4' A B2352 72.612 95.074 152.150 1.00 99.19 C
ATOM 8 O4' A B2352 72.309 94.619 150.802 1.00 98.85 O
ATOM 9 C3' A B2352 71.670 96.245 152.403 1.00 98.01 C
ATOM 10 O3' A B2352 72.215 97.171 153.352 1.00 95.56 O
ATOM 11 C2' A B2352 71.502 96.823 151.005 1.00 98.77 C
ATOM 12 O2' A B2352 72.612 97.593 150.591 1.00 98.80 O
ATOM 13 C1' A B2352 71.442 95.542 150.170 1.00 98.71 C
ATOM 14 N9 A B2352 70.098 94.959 150.147 1.00 98.36 N
ATOM 15 C8 A B2352 69.574 94.001 150.985 1.00 98.08 C
ATOM 16 N7 A B2352 68.323 93.705 150.732 1.00 98.17 N
ATOM 17 C5 A B2352 68.001 94.516 149.651 1.00 98.33 C
ATOM 18 C6 A B2352 66.817 94.679 148.913 1.00 98.49 C
ATOM 19 N6 A B2352 65.688 94.007 149.165 1.00 98.22 N
ATOM 20 N1 A B2352 66.830 95.570 147.894 1.00 97.83 N
ATOM 21 C2 A B2352 67.961 96.246 147.645 1.00 97.37 C
ATOM 22 N3 A B2352 69.134 96.182 148.269 1.00 97.47 N
ATOM 23 C4 A B2352 69.087 95.288 149.275 1.00 98.24 C
ATOM 24 P U B2353 71.246 97.919 154.404 1.00 93.63 P
ATOM 25 OP1 U B2353 72.084 98.741 155.309 1.00 93.61 O
ATOM 26 OP2 U B2353 70.332 96.902 154.978 1.00 93.92 O
ATOM 27 O5' U B2353 70.378 98.914 153.513 1.00 93.73 O
TER
Atoms:
OP1: (69.656,89.268,148.286)
OP2: (70.727,91.583,148.573)
C3': (74.461,89.003,146.217)
C1': (74.071,89.873,144.058)
C5': (71.990,88.486,146.675)
O4': (72.848,89.385,144.595)
C8: (73.090,92.175,144.584)
O2': (75.773,88.181,144.295)
C6: (75.281,94.489,143.089)
C5: (74.503,93.448,143.629)
C4: (74.941,92.155,143.405)
P: (70.501,90.368,147.750)
C4': (73.135,88.483,145.694)
C2': (75.206,89.318,144.924)
C2: (76.691,92.854,142.264)
N1: (76.390,94.153,142.399)
N3: (76.040,91.784,142.722)
N6: (74.981,95.778,143.222)
N7: (73.332,93.448,144.375)
N9: (74.024,91.335,144.025)
O5': (71.911,89.754,147.345)
O3': (75.131,88.062,147.050)
OP2: (70.727,91.583,148.573)
C3': (74.461,89.003,146.217)
C1': (74.071,89.873,144.058)
C5': (71.990,88.486,146.675)
O4': (72.848,89.385,144.595)
C8: (73.090,92.175,144.584)
O2': (75.773,88.181,144.295)
C6: (75.281,94.489,143.089)
C5: (74.503,93.448,143.629)
C4: (74.941,92.155,143.405)
P: (70.501,90.368,147.750)
C4': (73.135,88.483,145.694)
C2': (75.206,89.318,144.924)
C2: (76.691,92.854,142.264)
N1: (76.390,94.153,142.399)
N3: (76.040,91.784,142.722)
N6: (74.981,95.778,143.222)
N7: (73.332,93.448,144.375)
N9: (74.024,91.335,144.025)
O5': (71.911,89.754,147.345)
O3': (75.131,88.062,147.050)
OP1: (70.485,93.439,155.373)
OP2: (72.741,92.277,155.804)
C3': (71.670,96.245,152.403)
C1': (71.442,95.542,150.170)
C5': (72.455,93.911,153.090)
O4': (72.309,94.619,150.802)
C8: (69.574,94.001,150.985)
O2': (72.612,97.593,150.591)
C6: (66.817,94.679,148.913)
C5: (68.001,94.516,149.651)
C4: (69.087,95.288,149.275)
P: (71.951,93.525,155.632)
C4': (72.612,95.074,152.150)
C2': (71.502,96.823,151.005)
C2: (67.961,96.246,147.645)
N1: (66.830,95.570,147.894)
N3: (69.134,96.182,148.269)
N6: (65.688,94.007,149.165)
N7: (68.323,93.705,150.732)
N9: (70.098,94.959,150.147)
O5': (72.618,94.343,154.442)
O3': (72.215,97.171,153.352)
OP2: (72.741,92.277,155.804)
C3': (71.670,96.245,152.403)
C1': (71.442,95.542,150.170)
C5': (72.455,93.911,153.090)
O4': (72.309,94.619,150.802)
C8: (69.574,94.001,150.985)
O2': (72.612,97.593,150.591)
C6: (66.817,94.679,148.913)
C5: (68.001,94.516,149.651)
C4: (69.087,95.288,149.275)
P: (71.951,93.525,155.632)
C4': (72.612,95.074,152.150)
C2': (71.502,96.823,151.005)
C2: (67.961,96.246,147.645)
N1: (66.830,95.570,147.894)
N3: (69.134,96.182,148.269)
N6: (65.688,94.007,149.165)
N7: (68.323,93.705,150.732)
N9: (70.098,94.959,150.147)
O5': (72.618,94.343,154.442)
O3': (72.215,97.171,153.352)
Image (generated by PyMOL):