Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02345:02352
Extra
PDB:
ATOM 1 O3' A A2344 70.021 90.877 146.680 1.00 68.47 O
ATOM 2 P A A2345 70.698 90.426 148.062 1.00 71.90 P
ATOM 3 OP1 A A2345 69.919 89.286 148.626 1.00 71.44 O
ATOM 4 OP2 A A2345 70.914 91.641 148.891 1.00 71.90 O
ATOM 5 O5' A A2345 72.108 89.863 147.586 1.00 72.11 O
ATOM 6 C5' A A2345 72.197 88.603 146.900 1.00 69.78 C
ATOM 7 C4' A A2345 73.398 88.590 146.000 1.00 69.28 C
ATOM 8 O4' A A2345 73.188 89.518 144.910 1.00 66.72 O
ATOM 9 C3' A A2345 74.685 89.087 146.632 1.00 71.93 C
ATOM 10 O3' A A2345 75.296 88.114 147.477 1.00 75.59 O
ATOM 11 C2' A A2345 75.519 89.467 145.411 1.00 70.29 C
ATOM 12 O2' A A2345 76.191 88.386 144.782 1.00 69.94 O
ATOM 13 C1' A A2345 74.439 90.032 144.483 1.00 66.86 C
ATOM 14 N9 A A2345 74.365 91.491 144.482 1.00 63.78 N
ATOM 15 C8 A A2345 73.430 92.293 145.083 1.00 63.56 C
ATOM 16 N7 A A2345 73.626 93.572 144.882 1.00 63.64 N
ATOM 17 C5 A A2345 74.771 93.616 144.096 1.00 62.05 C
ATOM 18 C6 A A2345 75.493 94.684 143.532 1.00 61.68 C
ATOM 19 N6 A A2345 75.142 95.962 143.665 1.00 62.04 N
ATOM 20 N1 A A2345 76.594 94.388 142.812 1.00 61.13 N
ATOM 21 C2 A A2345 76.930 93.104 142.661 1.00 62.39 C
ATOM 22 N3 A A2345 76.326 92.012 143.130 1.00 62.41 N
ATOM 23 C4 A A2345 75.241 92.342 143.849 1.00 62.37 C
ATOM 24 P G A2346 75.646 88.500 148.999 1.00 78.44 P
ATOM 25 OP1 G A2346 76.309 87.308 149.594 1.00 78.99 O
ATOM 26 OP2 G A2346 74.417 89.052 149.641 1.00 77.50 O
ATOM 27 O5' G A2346 76.711 89.682 148.852 1.00 76.01 O
TER
ATOM 1 O3' C B2351 72.327 94.666 157.419 1.00105.18 O
ATOM 2 P A B2352 72.065 93.658 156.198 1.00106.63 P
ATOM 3 OP1 A B2352 70.604 93.625 155.899 1.00106.20 O
ATOM 4 OP2 A B2352 72.783 92.390 156.486 1.00106.18 O
ATOM 5 O5' A B2352 72.811 94.359 154.984 1.00105.50 O
ATOM 6 C5' A B2352 72.553 93.948 153.646 1.00104.45 C
ATOM 7 C4' A B2352 72.711 95.111 152.711 1.00102.74 C
ATOM 8 O4' A B2352 72.360 94.656 151.380 1.00103.03 O
ATOM 9 C3' A B2352 71.790 96.294 152.982 1.00101.22 C
ATOM 10 O3' A B2352 72.350 97.190 153.957 1.00 97.69 O
ATOM 11 C2' A B2352 71.672 96.914 151.596 1.00102.67 C
ATOM 12 O2' A B2352 72.803 97.679 151.238 1.00103.23 O
ATOM 13 C1' A B2352 71.630 95.664 150.712 1.00103.45 C
ATOM 14 N9 A B2352 70.273 95.165 150.499 1.00104.52 N
ATOM 15 C8 A B2352 69.605 94.193 151.207 1.00104.26 C
ATOM 16 N7 A B2352 68.381 93.985 150.790 1.00105.00 N
ATOM 17 C5 A B2352 68.234 94.874 149.732 1.00105.50 C
ATOM 18 C6 A B2352 67.159 95.151 148.872 1.00105.51 C
ATOM 19 N6 A B2352 65.979 94.532 148.944 1.00106.58 N
ATOM 20 N1 A B2352 67.339 96.098 147.925 1.00105.17 N
ATOM 21 C2 A B2352 68.523 96.719 147.854 1.00104.76 C
ATOM 22 N3 A B2352 69.607 96.549 148.603 1.00105.15 N
ATOM 23 C4 A B2352 69.393 95.601 149.538 1.00105.47 C
ATOM 24 P U B2353 71.385 98.062 154.916 1.00 94.41 P
ATOM 25 OP1 U B2353 72.225 99.000 155.698 1.00 92.89 O
ATOM 26 OP2 U B2353 70.480 97.128 155.628 1.00 94.29 O
ATOM 27 O5' U B2353 70.498 98.924 153.913 1.00 95.08 O
TER
ATOM 2 P A A2345 70.698 90.426 148.062 1.00 71.90 P
ATOM 3 OP1 A A2345 69.919 89.286 148.626 1.00 71.44 O
ATOM 4 OP2 A A2345 70.914 91.641 148.891 1.00 71.90 O
ATOM 5 O5' A A2345 72.108 89.863 147.586 1.00 72.11 O
ATOM 6 C5' A A2345 72.197 88.603 146.900 1.00 69.78 C
ATOM 7 C4' A A2345 73.398 88.590 146.000 1.00 69.28 C
ATOM 8 O4' A A2345 73.188 89.518 144.910 1.00 66.72 O
ATOM 9 C3' A A2345 74.685 89.087 146.632 1.00 71.93 C
ATOM 10 O3' A A2345 75.296 88.114 147.477 1.00 75.59 O
ATOM 11 C2' A A2345 75.519 89.467 145.411 1.00 70.29 C
ATOM 12 O2' A A2345 76.191 88.386 144.782 1.00 69.94 O
ATOM 13 C1' A A2345 74.439 90.032 144.483 1.00 66.86 C
ATOM 14 N9 A A2345 74.365 91.491 144.482 1.00 63.78 N
ATOM 15 C8 A A2345 73.430 92.293 145.083 1.00 63.56 C
ATOM 16 N7 A A2345 73.626 93.572 144.882 1.00 63.64 N
ATOM 17 C5 A A2345 74.771 93.616 144.096 1.00 62.05 C
ATOM 18 C6 A A2345 75.493 94.684 143.532 1.00 61.68 C
ATOM 19 N6 A A2345 75.142 95.962 143.665 1.00 62.04 N
ATOM 20 N1 A A2345 76.594 94.388 142.812 1.00 61.13 N
ATOM 21 C2 A A2345 76.930 93.104 142.661 1.00 62.39 C
ATOM 22 N3 A A2345 76.326 92.012 143.130 1.00 62.41 N
ATOM 23 C4 A A2345 75.241 92.342 143.849 1.00 62.37 C
ATOM 24 P G A2346 75.646 88.500 148.999 1.00 78.44 P
ATOM 25 OP1 G A2346 76.309 87.308 149.594 1.00 78.99 O
ATOM 26 OP2 G A2346 74.417 89.052 149.641 1.00 77.50 O
ATOM 27 O5' G A2346 76.711 89.682 148.852 1.00 76.01 O
TER
ATOM 1 O3' C B2351 72.327 94.666 157.419 1.00105.18 O
ATOM 2 P A B2352 72.065 93.658 156.198 1.00106.63 P
ATOM 3 OP1 A B2352 70.604 93.625 155.899 1.00106.20 O
ATOM 4 OP2 A B2352 72.783 92.390 156.486 1.00106.18 O
ATOM 5 O5' A B2352 72.811 94.359 154.984 1.00105.50 O
ATOM 6 C5' A B2352 72.553 93.948 153.646 1.00104.45 C
ATOM 7 C4' A B2352 72.711 95.111 152.711 1.00102.74 C
ATOM 8 O4' A B2352 72.360 94.656 151.380 1.00103.03 O
ATOM 9 C3' A B2352 71.790 96.294 152.982 1.00101.22 C
ATOM 10 O3' A B2352 72.350 97.190 153.957 1.00 97.69 O
ATOM 11 C2' A B2352 71.672 96.914 151.596 1.00102.67 C
ATOM 12 O2' A B2352 72.803 97.679 151.238 1.00103.23 O
ATOM 13 C1' A B2352 71.630 95.664 150.712 1.00103.45 C
ATOM 14 N9 A B2352 70.273 95.165 150.499 1.00104.52 N
ATOM 15 C8 A B2352 69.605 94.193 151.207 1.00104.26 C
ATOM 16 N7 A B2352 68.381 93.985 150.790 1.00105.00 N
ATOM 17 C5 A B2352 68.234 94.874 149.732 1.00105.50 C
ATOM 18 C6 A B2352 67.159 95.151 148.872 1.00105.51 C
ATOM 19 N6 A B2352 65.979 94.532 148.944 1.00106.58 N
ATOM 20 N1 A B2352 67.339 96.098 147.925 1.00105.17 N
ATOM 21 C2 A B2352 68.523 96.719 147.854 1.00104.76 C
ATOM 22 N3 A B2352 69.607 96.549 148.603 1.00105.15 N
ATOM 23 C4 A B2352 69.393 95.601 149.538 1.00105.47 C
ATOM 24 P U B2353 71.385 98.062 154.916 1.00 94.41 P
ATOM 25 OP1 U B2353 72.225 99.000 155.698 1.00 92.89 O
ATOM 26 OP2 U B2353 70.480 97.128 155.628 1.00 94.29 O
ATOM 27 O5' U B2353 70.498 98.924 153.913 1.00 95.08 O
TER
Atoms:
OP1: (69.919,89.286,148.626)
OP2: (70.914,91.641,148.891)
C3': (74.685,89.087,146.632)
C1': (74.439,90.032,144.483)
C5': (72.197,88.603,146.900)
O4': (73.188,89.518,144.910)
C8: (73.430,92.293,145.083)
O2': (76.191,88.386,144.782)
C6: (75.493,94.684,143.532)
C5: (74.771,93.616,144.096)
C4: (75.241,92.342,143.849)
P: (70.698,90.426,148.062)
C4': (73.398,88.590,146.000)
C2': (75.519,89.467,145.411)
C2: (76.930,93.104,142.661)
N1: (76.594,94.388,142.812)
N3: (76.326,92.012,143.130)
N6: (75.142,95.962,143.665)
N7: (73.626,93.572,144.882)
N9: (74.365,91.491,144.482)
O5': (72.108,89.863,147.586)
O3': (75.296,88.114,147.477)
OP2: (70.914,91.641,148.891)
C3': (74.685,89.087,146.632)
C1': (74.439,90.032,144.483)
C5': (72.197,88.603,146.900)
O4': (73.188,89.518,144.910)
C8: (73.430,92.293,145.083)
O2': (76.191,88.386,144.782)
C6: (75.493,94.684,143.532)
C5: (74.771,93.616,144.096)
C4: (75.241,92.342,143.849)
P: (70.698,90.426,148.062)
C4': (73.398,88.590,146.000)
C2': (75.519,89.467,145.411)
C2: (76.930,93.104,142.661)
N1: (76.594,94.388,142.812)
N3: (76.326,92.012,143.130)
N6: (75.142,95.962,143.665)
N7: (73.626,93.572,144.882)
N9: (74.365,91.491,144.482)
O5': (72.108,89.863,147.586)
O3': (75.296,88.114,147.477)
OP1: (70.604,93.625,155.899)
OP2: (72.783,92.390,156.486)
C3': (71.790,96.294,152.982)
C1': (71.630,95.664,150.712)
C5': (72.553,93.948,153.646)
O4': (72.360,94.656,151.380)
C8: (69.605,94.193,151.207)
O2': (72.803,97.679,151.238)
C6: (67.159,95.151,148.872)
C5: (68.234,94.874,149.732)
C4: (69.393,95.601,149.538)
P: (72.065,93.658,156.198)
C4': (72.711,95.111,152.711)
C2': (71.672,96.914,151.596)
C2: (68.523,96.719,147.854)
N1: (67.339,96.098,147.925)
N3: (69.607,96.549,148.603)
N6: (65.979,94.532,148.944)
N7: (68.381,93.985,150.790)
N9: (70.273,95.165,150.499)
O5': (72.811,94.359,154.984)
O3': (72.350,97.190,153.957)
OP2: (72.783,92.390,156.486)
C3': (71.790,96.294,152.982)
C1': (71.630,95.664,150.712)
C5': (72.553,93.948,153.646)
O4': (72.360,94.656,151.380)
C8: (69.605,94.193,151.207)
O2': (72.803,97.679,151.238)
C6: (67.159,95.151,148.872)
C5: (68.234,94.874,149.732)
C4: (69.393,95.601,149.538)
P: (72.065,93.658,156.198)
C4': (72.711,95.111,152.711)
C2': (71.672,96.914,151.596)
C2: (68.523,96.719,147.854)
N1: (67.339,96.098,147.925)
N3: (69.607,96.549,148.603)
N6: (65.979,94.532,148.944)
N7: (68.381,93.985,150.790)
N9: (70.273,95.165,150.499)
O5': (72.811,94.359,154.984)
O3': (72.350,97.190,153.957)
Image (generated by PyMOL):