Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02345:02352
Extra
PDB:
ATOM 1 O3' A A2344 69.882 90.592 146.190 1.00 72.27 O
ATOM 2 P A A2345 70.539 90.179 147.594 1.00 74.53 P
ATOM 3 OP1 A A2345 69.725 89.075 148.172 1.00 74.22 O
ATOM 4 OP2 A A2345 70.752 91.419 148.379 1.00 75.28 O
ATOM 5 O5' A A2345 71.956 89.591 147.173 1.00 75.10 O
ATOM 6 C5' A A2345 72.052 88.323 146.503 1.00 75.51 C
ATOM 7 C4' A A2345 73.211 88.327 145.539 1.00 76.21 C
ATOM 8 O4' A A2345 72.932 89.219 144.429 1.00 74.78 O
ATOM 9 C3' A A2345 74.524 88.850 146.093 1.00 77.28 C
ATOM 10 O3' A A2345 75.197 87.888 146.897 1.00 78.58 O
ATOM 11 C2' A A2345 75.286 89.221 144.824 1.00 75.88 C
ATOM 12 O2' A A2345 75.909 88.119 144.185 1.00 74.80 O
ATOM 13 C1' A A2345 74.153 89.767 143.948 1.00 74.16 C
ATOM 14 N9 A A2345 74.049 91.225 143.963 1.00 71.49 N
ATOM 15 C8 A A2345 73.081 92.002 144.548 1.00 71.39 C
ATOM 16 N7 A A2345 73.262 93.289 144.373 1.00 71.35 N
ATOM 17 C5 A A2345 74.431 93.364 143.626 1.00 69.79 C
ATOM 18 C6 A A2345 75.160 94.455 143.112 1.00 68.59 C
ATOM 19 N6 A A2345 74.797 95.726 143.270 1.00 68.84 N
ATOM 20 N1 A A2345 76.284 94.189 142.419 1.00 67.23 N
ATOM 21 C2 A A2345 76.639 92.912 142.249 1.00 69.41 C
ATOM 22 N3 A A2345 76.036 91.801 142.675 1.00 69.78 N
ATOM 23 C4 A A2345 74.926 92.102 143.368 1.00 70.07 C
ATOM 24 P G A2346 75.777 88.325 148.332 1.00 79.39 P
ATOM 25 OP1 G A2346 76.695 87.234 148.746 1.00 80.02 O
ATOM 26 OP2 G A2346 74.642 88.708 149.220 1.00 79.13 O
ATOM 27 O5' G A2346 76.655 89.613 148.002 1.00 77.17 O
TER
ATOM 1 O3' C B2351 72.149 94.322 156.908 1.00105.07 O
ATOM 2 P A B2352 71.842 93.476 155.581 1.00106.50 P
ATOM 3 OP1 A B2352 70.387 93.553 155.268 1.00106.03 O
ATOM 4 OP2 A B2352 72.489 92.147 155.742 1.00106.62 O
ATOM 5 O5' A B2352 72.634 94.264 154.450 1.00105.43 O
ATOM 6 C5' A B2352 72.493 93.893 153.079 1.00104.21 C
ATOM 7 C4' A B2352 72.677 95.095 152.197 1.00102.08 C
ATOM 8 O4' A B2352 72.442 94.700 150.818 1.00102.68 O
ATOM 9 C3' A B2352 71.714 96.245 152.465 1.00100.20 C
ATOM 10 O3' A B2352 72.225 97.147 153.446 1.00 95.89 O
ATOM 11 C2' A B2352 71.558 96.861 151.083 1.00101.76 C
ATOM 12 O2' A B2352 72.656 97.666 150.712 1.00101.85 O
ATOM 13 C1' A B2352 71.535 95.601 150.215 1.00102.78 C
ATOM 14 N9 A B2352 70.213 94.974 150.208 1.00103.63 N
ATOM 15 C8 A B2352 69.709 94.029 151.074 1.00103.68 C
ATOM 16 N7 A B2352 68.469 93.692 150.824 1.00104.21 N
ATOM 17 C5 A B2352 68.135 94.457 149.716 1.00104.40 C
ATOM 18 C6 A B2352 66.958 94.563 148.968 1.00104.75 C
ATOM 19 N6 A B2352 65.851 93.863 149.236 1.00105.49 N
ATOM 20 N1 A B2352 66.953 95.422 147.922 1.00104.34 N
ATOM 21 C2 A B2352 68.066 96.121 147.658 1.00102.65 C
ATOM 22 N3 A B2352 69.233 96.108 148.286 1.00102.88 N
ATOM 23 C4 A B2352 69.202 95.245 149.320 1.00104.06 C
ATOM 24 P U B2353 71.217 97.921 154.431 1.00 92.80 P
ATOM 25 OP1 U B2353 72.017 98.803 155.307 1.00 91.65 O
ATOM 26 OP2 U B2353 70.323 96.906 155.033 1.00 92.75 O
ATOM 27 O5' U B2353 70.339 98.835 153.466 1.00 93.29 O
TER
ATOM 2 P A A2345 70.539 90.179 147.594 1.00 74.53 P
ATOM 3 OP1 A A2345 69.725 89.075 148.172 1.00 74.22 O
ATOM 4 OP2 A A2345 70.752 91.419 148.379 1.00 75.28 O
ATOM 5 O5' A A2345 71.956 89.591 147.173 1.00 75.10 O
ATOM 6 C5' A A2345 72.052 88.323 146.503 1.00 75.51 C
ATOM 7 C4' A A2345 73.211 88.327 145.539 1.00 76.21 C
ATOM 8 O4' A A2345 72.932 89.219 144.429 1.00 74.78 O
ATOM 9 C3' A A2345 74.524 88.850 146.093 1.00 77.28 C
ATOM 10 O3' A A2345 75.197 87.888 146.897 1.00 78.58 O
ATOM 11 C2' A A2345 75.286 89.221 144.824 1.00 75.88 C
ATOM 12 O2' A A2345 75.909 88.119 144.185 1.00 74.80 O
ATOM 13 C1' A A2345 74.153 89.767 143.948 1.00 74.16 C
ATOM 14 N9 A A2345 74.049 91.225 143.963 1.00 71.49 N
ATOM 15 C8 A A2345 73.081 92.002 144.548 1.00 71.39 C
ATOM 16 N7 A A2345 73.262 93.289 144.373 1.00 71.35 N
ATOM 17 C5 A A2345 74.431 93.364 143.626 1.00 69.79 C
ATOM 18 C6 A A2345 75.160 94.455 143.112 1.00 68.59 C
ATOM 19 N6 A A2345 74.797 95.726 143.270 1.00 68.84 N
ATOM 20 N1 A A2345 76.284 94.189 142.419 1.00 67.23 N
ATOM 21 C2 A A2345 76.639 92.912 142.249 1.00 69.41 C
ATOM 22 N3 A A2345 76.036 91.801 142.675 1.00 69.78 N
ATOM 23 C4 A A2345 74.926 92.102 143.368 1.00 70.07 C
ATOM 24 P G A2346 75.777 88.325 148.332 1.00 79.39 P
ATOM 25 OP1 G A2346 76.695 87.234 148.746 1.00 80.02 O
ATOM 26 OP2 G A2346 74.642 88.708 149.220 1.00 79.13 O
ATOM 27 O5' G A2346 76.655 89.613 148.002 1.00 77.17 O
TER
ATOM 1 O3' C B2351 72.149 94.322 156.908 1.00105.07 O
ATOM 2 P A B2352 71.842 93.476 155.581 1.00106.50 P
ATOM 3 OP1 A B2352 70.387 93.553 155.268 1.00106.03 O
ATOM 4 OP2 A B2352 72.489 92.147 155.742 1.00106.62 O
ATOM 5 O5' A B2352 72.634 94.264 154.450 1.00105.43 O
ATOM 6 C5' A B2352 72.493 93.893 153.079 1.00104.21 C
ATOM 7 C4' A B2352 72.677 95.095 152.197 1.00102.08 C
ATOM 8 O4' A B2352 72.442 94.700 150.818 1.00102.68 O
ATOM 9 C3' A B2352 71.714 96.245 152.465 1.00100.20 C
ATOM 10 O3' A B2352 72.225 97.147 153.446 1.00 95.89 O
ATOM 11 C2' A B2352 71.558 96.861 151.083 1.00101.76 C
ATOM 12 O2' A B2352 72.656 97.666 150.712 1.00101.85 O
ATOM 13 C1' A B2352 71.535 95.601 150.215 1.00102.78 C
ATOM 14 N9 A B2352 70.213 94.974 150.208 1.00103.63 N
ATOM 15 C8 A B2352 69.709 94.029 151.074 1.00103.68 C
ATOM 16 N7 A B2352 68.469 93.692 150.824 1.00104.21 N
ATOM 17 C5 A B2352 68.135 94.457 149.716 1.00104.40 C
ATOM 18 C6 A B2352 66.958 94.563 148.968 1.00104.75 C
ATOM 19 N6 A B2352 65.851 93.863 149.236 1.00105.49 N
ATOM 20 N1 A B2352 66.953 95.422 147.922 1.00104.34 N
ATOM 21 C2 A B2352 68.066 96.121 147.658 1.00102.65 C
ATOM 22 N3 A B2352 69.233 96.108 148.286 1.00102.88 N
ATOM 23 C4 A B2352 69.202 95.245 149.320 1.00104.06 C
ATOM 24 P U B2353 71.217 97.921 154.431 1.00 92.80 P
ATOM 25 OP1 U B2353 72.017 98.803 155.307 1.00 91.65 O
ATOM 26 OP2 U B2353 70.323 96.906 155.033 1.00 92.75 O
ATOM 27 O5' U B2353 70.339 98.835 153.466 1.00 93.29 O
TER
Atoms:
OP1: (69.725,89.075,148.172)
OP2: (70.752,91.419,148.379)
C3': (74.524,88.850,146.093)
C1': (74.153,89.767,143.948)
C5': (72.052,88.323,146.503)
O4': (72.932,89.219,144.429)
C8: (73.081,92.002,144.548)
O2': (75.909,88.119,144.185)
C6: (75.160,94.455,143.112)
C5: (74.431,93.364,143.626)
C4: (74.926,92.102,143.368)
P: (70.539,90.179,147.594)
C4': (73.211,88.327,145.539)
C2': (75.286,89.221,144.824)
C2: (76.639,92.912,142.249)
N1: (76.284,94.189,142.419)
N3: (76.036,91.801,142.675)
N6: (74.797,95.726,143.270)
N7: (73.262,93.289,144.373)
N9: (74.049,91.225,143.963)
O5': (71.956,89.591,147.173)
O3': (75.197,87.888,146.897)
OP2: (70.752,91.419,148.379)
C3': (74.524,88.850,146.093)
C1': (74.153,89.767,143.948)
C5': (72.052,88.323,146.503)
O4': (72.932,89.219,144.429)
C8: (73.081,92.002,144.548)
O2': (75.909,88.119,144.185)
C6: (75.160,94.455,143.112)
C5: (74.431,93.364,143.626)
C4: (74.926,92.102,143.368)
P: (70.539,90.179,147.594)
C4': (73.211,88.327,145.539)
C2': (75.286,89.221,144.824)
C2: (76.639,92.912,142.249)
N1: (76.284,94.189,142.419)
N3: (76.036,91.801,142.675)
N6: (74.797,95.726,143.270)
N7: (73.262,93.289,144.373)
N9: (74.049,91.225,143.963)
O5': (71.956,89.591,147.173)
O3': (75.197,87.888,146.897)
OP1: (70.387,93.553,155.268)
OP2: (72.489,92.147,155.742)
C3': (71.714,96.245,152.465)
C1': (71.535,95.601,150.215)
C5': (72.493,93.893,153.079)
O4': (72.442,94.700,150.818)
C8: (69.709,94.029,151.074)
O2': (72.656,97.666,150.712)
C6: (66.958,94.563,148.968)
C5: (68.135,94.457,149.716)
C4: (69.202,95.245,149.320)
P: (71.842,93.476,155.581)
C4': (72.677,95.095,152.197)
C2': (71.558,96.861,151.083)
C2: (68.066,96.121,147.658)
N1: (66.953,95.422,147.922)
N3: (69.233,96.108,148.286)
N6: (65.851,93.863,149.236)
N7: (68.469,93.692,150.824)
N9: (70.213,94.974,150.208)
O5': (72.634,94.264,154.450)
O3': (72.225,97.147,153.446)
OP2: (72.489,92.147,155.742)
C3': (71.714,96.245,152.465)
C1': (71.535,95.601,150.215)
C5': (72.493,93.893,153.079)
O4': (72.442,94.700,150.818)
C8: (69.709,94.029,151.074)
O2': (72.656,97.666,150.712)
C6: (66.958,94.563,148.968)
C5: (68.135,94.457,149.716)
C4: (69.202,95.245,149.320)
P: (71.842,93.476,155.581)
C4': (72.677,95.095,152.197)
C2': (71.558,96.861,151.083)
C2: (68.066,96.121,147.658)
N1: (66.953,95.422,147.922)
N3: (69.233,96.108,148.286)
N6: (65.851,93.863,149.236)
N7: (68.469,93.692,150.824)
N9: (70.213,94.974,150.208)
O5': (72.634,94.264,154.450)
O3': (72.225,97.147,153.446)
Image (generated by PyMOL):