Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0312:0313
Extra
PDB:
ATOM 1 O3' C A 311 -4.758 133.554 30.158 1.00 69.91 O
ATOM 2 P G A 312 -4.019 132.372 29.351 1.00 71.81 P
ATOM 3 OP1 G A 312 -4.876 132.052 28.187 1.00 73.69 O
ATOM 4 OP2 G A 312 -3.668 131.300 30.317 1.00 72.52 O
ATOM 5 O5' G A 312 -2.677 133.030 28.790 1.00 71.35 O
ATOM 6 C5' G A 312 -2.744 134.045 27.777 1.00 73.04 C
ATOM 7 C4' G A 312 -1.376 134.622 27.473 1.00 73.21 C
ATOM 8 O4' G A 312 -0.766 135.157 28.681 1.00 73.13 O
ATOM 9 C3' G A 312 -0.278 133.709 26.953 1.00 72.68 C
ATOM 10 O3' G A 312 -0.421 133.330 25.584 1.00 71.82 O
ATOM 11 C2' G A 312 0.935 134.616 27.121 1.00 73.46 C
ATOM 12 O2' G A 312 1.027 135.611 26.120 1.00 74.24 O
ATOM 13 C1' G A 312 0.638 135.269 28.475 1.00 73.55 C
ATOM 14 N9 G A 312 1.363 134.554 29.526 1.00 73.01 N
ATOM 15 C8 G A 312 0.877 133.651 30.442 1.00 72.50 C
ATOM 16 N7 G A 312 1.815 133.113 31.176 1.00 71.05 N
ATOM 17 C5 G A 312 2.986 133.714 30.733 1.00 71.43 C
ATOM 18 C6 G A 312 4.337 133.521 31.138 1.00 71.57 C
ATOM 19 O6 G A 312 4.785 132.742 31.987 1.00 72.91 O
ATOM 20 N1 G A 312 5.206 134.345 30.430 1.00 70.66 N
ATOM 21 C2 G A 312 4.830 135.235 29.456 1.00 71.17 C
ATOM 22 N2 G A 312 5.808 135.952 28.891 1.00 70.63 N
ATOM 23 N3 G A 312 3.585 135.414 29.063 1.00 71.96 N
ATOM 24 C4 G A 312 2.721 134.625 29.738 1.00 72.01 C
ATOM 25 P U A 313 0.494 132.138 24.989 1.00 71.82 P
ATOM 26 OP1 U A 313 0.086 131.848 23.592 1.00 71.35 O
ATOM 27 OP2 U A 313 0.510 131.039 25.988 1.00 70.93 O
ATOM 28 O5' U A 313 1.962 132.752 24.951 1.00 67.37 O
TER
ATOM 1 O3' G B 312 -0.421 133.330 25.584 1.00 71.82 O
ATOM 2 P U B 313 0.494 132.138 24.989 1.00 71.82 P
ATOM 3 OP1 U B 313 0.086 131.848 23.592 1.00 71.35 O
ATOM 4 OP2 U B 313 0.510 131.039 25.988 1.00 70.93 O
ATOM 5 O5' U B 313 1.962 132.752 24.951 1.00 67.37 O
ATOM 6 C5' U B 313 2.277 133.833 24.073 1.00 63.68 C
ATOM 7 C4' U B 313 3.751 134.135 24.124 1.00 61.44 C
ATOM 8 O4' U B 313 4.118 134.489 25.482 1.00 62.08 O
ATOM 9 C3' U B 313 4.702 132.996 23.795 1.00 59.45 C
ATOM 10 O3' U B 313 4.856 132.794 22.403 1.00 55.72 O
ATOM 11 C2' U B 313 5.990 133.491 24.427 1.00 61.55 C
ATOM 12 O2' U B 313 6.603 134.517 23.667 1.00 61.76 O
ATOM 13 C1' U B 313 5.459 134.087 25.730 1.00 62.91 C
ATOM 14 N1 U B 313 5.476 133.113 26.837 1.00 63.89 N
ATOM 15 C2 U B 313 6.714 132.736 27.342 1.00 64.66 C
ATOM 16 O2 U B 313 7.771 133.163 26.903 1.00 65.13 O
ATOM 17 N3 U B 313 6.669 131.835 28.377 1.00 64.88 N
ATOM 18 C4 U B 313 5.546 131.281 28.947 1.00 65.41 C
ATOM 19 O4 U B 313 5.670 130.501 29.895 1.00 65.18 O
ATOM 20 C5 U B 313 4.308 131.712 28.367 1.00 64.95 C
ATOM 21 C6 U B 313 4.315 132.589 27.360 1.00 63.92 C
ATOM 22 P G B 314 5.566 131.455 21.869 1.00 55.64 P
ATOM 23 OP1 G B 314 5.404 131.439 20.394 1.00 57.61 O
ATOM 24 OP2 G B 314 5.087 130.304 22.670 1.00 54.83 O
ATOM 25 O5' G B 314 7.112 131.669 22.184 1.00 55.67 O
TER
ATOM 2 P G A 312 -4.019 132.372 29.351 1.00 71.81 P
ATOM 3 OP1 G A 312 -4.876 132.052 28.187 1.00 73.69 O
ATOM 4 OP2 G A 312 -3.668 131.300 30.317 1.00 72.52 O
ATOM 5 O5' G A 312 -2.677 133.030 28.790 1.00 71.35 O
ATOM 6 C5' G A 312 -2.744 134.045 27.777 1.00 73.04 C
ATOM 7 C4' G A 312 -1.376 134.622 27.473 1.00 73.21 C
ATOM 8 O4' G A 312 -0.766 135.157 28.681 1.00 73.13 O
ATOM 9 C3' G A 312 -0.278 133.709 26.953 1.00 72.68 C
ATOM 10 O3' G A 312 -0.421 133.330 25.584 1.00 71.82 O
ATOM 11 C2' G A 312 0.935 134.616 27.121 1.00 73.46 C
ATOM 12 O2' G A 312 1.027 135.611 26.120 1.00 74.24 O
ATOM 13 C1' G A 312 0.638 135.269 28.475 1.00 73.55 C
ATOM 14 N9 G A 312 1.363 134.554 29.526 1.00 73.01 N
ATOM 15 C8 G A 312 0.877 133.651 30.442 1.00 72.50 C
ATOM 16 N7 G A 312 1.815 133.113 31.176 1.00 71.05 N
ATOM 17 C5 G A 312 2.986 133.714 30.733 1.00 71.43 C
ATOM 18 C6 G A 312 4.337 133.521 31.138 1.00 71.57 C
ATOM 19 O6 G A 312 4.785 132.742 31.987 1.00 72.91 O
ATOM 20 N1 G A 312 5.206 134.345 30.430 1.00 70.66 N
ATOM 21 C2 G A 312 4.830 135.235 29.456 1.00 71.17 C
ATOM 22 N2 G A 312 5.808 135.952 28.891 1.00 70.63 N
ATOM 23 N3 G A 312 3.585 135.414 29.063 1.00 71.96 N
ATOM 24 C4 G A 312 2.721 134.625 29.738 1.00 72.01 C
ATOM 25 P U A 313 0.494 132.138 24.989 1.00 71.82 P
ATOM 26 OP1 U A 313 0.086 131.848 23.592 1.00 71.35 O
ATOM 27 OP2 U A 313 0.510 131.039 25.988 1.00 70.93 O
ATOM 28 O5' U A 313 1.962 132.752 24.951 1.00 67.37 O
TER
ATOM 1 O3' G B 312 -0.421 133.330 25.584 1.00 71.82 O
ATOM 2 P U B 313 0.494 132.138 24.989 1.00 71.82 P
ATOM 3 OP1 U B 313 0.086 131.848 23.592 1.00 71.35 O
ATOM 4 OP2 U B 313 0.510 131.039 25.988 1.00 70.93 O
ATOM 5 O5' U B 313 1.962 132.752 24.951 1.00 67.37 O
ATOM 6 C5' U B 313 2.277 133.833 24.073 1.00 63.68 C
ATOM 7 C4' U B 313 3.751 134.135 24.124 1.00 61.44 C
ATOM 8 O4' U B 313 4.118 134.489 25.482 1.00 62.08 O
ATOM 9 C3' U B 313 4.702 132.996 23.795 1.00 59.45 C
ATOM 10 O3' U B 313 4.856 132.794 22.403 1.00 55.72 O
ATOM 11 C2' U B 313 5.990 133.491 24.427 1.00 61.55 C
ATOM 12 O2' U B 313 6.603 134.517 23.667 1.00 61.76 O
ATOM 13 C1' U B 313 5.459 134.087 25.730 1.00 62.91 C
ATOM 14 N1 U B 313 5.476 133.113 26.837 1.00 63.89 N
ATOM 15 C2 U B 313 6.714 132.736 27.342 1.00 64.66 C
ATOM 16 O2 U B 313 7.771 133.163 26.903 1.00 65.13 O
ATOM 17 N3 U B 313 6.669 131.835 28.377 1.00 64.88 N
ATOM 18 C4 U B 313 5.546 131.281 28.947 1.00 65.41 C
ATOM 19 O4 U B 313 5.670 130.501 29.895 1.00 65.18 O
ATOM 20 C5 U B 313 4.308 131.712 28.367 1.00 64.95 C
ATOM 21 C6 U B 313 4.315 132.589 27.360 1.00 63.92 C
ATOM 22 P G B 314 5.566 131.455 21.869 1.00 55.64 P
ATOM 23 OP1 G B 314 5.404 131.439 20.394 1.00 57.61 O
ATOM 24 OP2 G B 314 5.087 130.304 22.670 1.00 54.83 O
ATOM 25 O5' G B 314 7.112 131.669 22.184 1.00 55.67 O
TER
Atoms:
OP1: (-4.876,132.052,28.187)
OP2: (-3.668,131.300,30.317)
C3': (-0.278,133.709,26.953)
C1': (0.638,135.269,28.475)
C5': (-2.744,134.045,27.777)
O6: (4.785,132.742,31.987)
O4': (-0.766,135.157,28.681)
C8: (0.877,133.651,30.442)
C2: (4.830,135.235,29.456)
C6: (4.337,133.521,31.138)
C5: (2.986,133.714,30.733)
C4: (2.721,134.625,29.738)
P: (-4.019,132.372,29.351)
C4': (-1.376,134.622,27.473)
C2': (0.935,134.616,27.121)
O2': (1.027,135.611,26.120)
N1: (5.206,134.345,30.430)
N2: (5.808,135.952,28.891)
N3: (3.585,135.414,29.063)
N7: (1.815,133.113,31.176)
N9: (1.363,134.554,29.526)
O5': (-2.677,133.030,28.790)
O3': (-0.421,133.330,25.584)
OP2: (-3.668,131.300,30.317)
C3': (-0.278,133.709,26.953)
C1': (0.638,135.269,28.475)
C5': (-2.744,134.045,27.777)
O6: (4.785,132.742,31.987)
O4': (-0.766,135.157,28.681)
C8: (0.877,133.651,30.442)
C2: (4.830,135.235,29.456)
C6: (4.337,133.521,31.138)
C5: (2.986,133.714,30.733)
C4: (2.721,134.625,29.738)
P: (-4.019,132.372,29.351)
C4': (-1.376,134.622,27.473)
C2': (0.935,134.616,27.121)
O2': (1.027,135.611,26.120)
N1: (5.206,134.345,30.430)
N2: (5.808,135.952,28.891)
N3: (3.585,135.414,29.063)
N7: (1.815,133.113,31.176)
N9: (1.363,134.554,29.526)
O5': (-2.677,133.030,28.790)
O3': (-0.421,133.330,25.584)
C4: (5.546,131.281,28.947)
N3: (6.669,131.835,28.377)
OP1: (0.086,131.848,23.592)
OP2: (0.510,131.039,25.988)
C2: (6.714,132.736,27.342)
C1': (5.459,134.087,25.730)
C3': (4.702,132.996,23.795)
O5': (1.962,132.752,24.951)
O4': (4.118,134.489,25.482)
C5': (2.277,133.833,24.073)
P: (0.494,132.138,24.989)
C4': (3.751,134.135,24.124)
C2': (5.990,133.491,24.427)
O2': (6.603,134.517,23.667)
N1: (5.476,133.113,26.837)
O4: (5.670,130.501,29.895)
O2: (7.771,133.163,26.903)
C6: (4.315,132.589,27.360)
C5: (4.308,131.712,28.367)
O3': (4.856,132.794,22.403)
N3: (6.669,131.835,28.377)
OP1: (0.086,131.848,23.592)
OP2: (0.510,131.039,25.988)
C2: (6.714,132.736,27.342)
C1': (5.459,134.087,25.730)
C3': (4.702,132.996,23.795)
O5': (1.962,132.752,24.951)
O4': (4.118,134.489,25.482)
C5': (2.277,133.833,24.073)
P: (0.494,132.138,24.989)
C4': (3.751,134.135,24.124)
C2': (5.990,133.491,24.427)
O2': (6.603,134.517,23.667)
N1: (5.476,133.113,26.837)
O4: (5.670,130.501,29.895)
O2: (7.771,133.163,26.903)
C6: (4.315,132.589,27.360)
C5: (4.308,131.712,28.367)
O3': (4.856,132.794,22.403)
Image (generated by PyMOL):