ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02499:02500

Extra

PDB:
ATOM 1 O3' G A2498 41.465 154.562 117.293 1.00 37.83 O
ATOM 2 P G A2499 39.877 154.724 117.491 1.00 37.41 P
ATOM 3 OP1 G A2499 39.647 155.885 118.355 1.00 40.27 O
ATOM 4 OP2 G A2499 39.310 153.411 117.873 1.00 38.92 O
ATOM 5 O5' G A2499 39.379 155.106 116.025 1.00 38.53 O
ATOM 6 C5' G A2499 37.998 155.028 115.647 1.00 36.41 C
ATOM 7 C4' G A2499 37.866 155.147 114.143 1.00 38.38 C
ATOM 8 O4' G A2499 38.650 154.097 113.499 1.00 36.47 O
ATOM 9 C3' G A2499 36.457 154.969 113.588 1.00 38.11 C
ATOM 10 O3' G A2499 35.719 156.186 113.632 1.00 40.15 O
ATOM 11 C2' G A2499 36.739 154.497 112.170 1.00 37.45 C
ATOM 12 O2' G A2499 37.186 155.548 111.335 1.00 34.26 O
ATOM 13 C1' G A2499 37.917 153.555 112.414 1.00 36.13 C
ATOM 14 N9 G A2499 37.498 152.207 112.784 1.00 34.37 N
ATOM 15 C8 G A2499 37.785 151.545 113.954 1.00 33.93 C
ATOM 16 N7 G A2499 37.283 150.342 113.998 1.00 33.15 N
ATOM 17 C5 G A2499 36.630 150.199 112.783 1.00 34.44 C
ATOM 18 C6 G A2499 35.924 149.104 112.256 1.00 34.06 C
ATOM 19 O6 G A2499 35.752 147.994 112.763 1.00 34.25 O
ATOM 20 N1 G A2499 35.399 149.389 110.997 1.00 32.45 N
ATOM 21 C2 G A2499 35.554 150.578 110.332 1.00 33.27 C
ATOM 22 N2 G A2499 34.944 150.690 109.144 1.00 32.03 N
ATOM 23 N3 G A2499 36.247 151.595 110.802 1.00 34.14 N
ATOM 24 C4 G A2499 36.747 151.342 112.026 1.00 32.53 C
ATOM 25 P U A2500 34.173 156.177 114.085 1.00 39.86 P
ATOM 26 OP1 U A2500 33.770 157.597 114.238 1.00 43.66 O
ATOM 27 OP2 U A2500 33.960 155.235 115.202 1.00 42.61 O
ATOM 28 O5' U A2500 33.405 155.609 112.815 1.00 42.53 O
TER

ATOM 1 O3' G B2499 35.719 156.186 113.632 1.00 40.15 O
ATOM 2 P U B2500 34.173 156.177 114.085 1.00 39.86 P
ATOM 3 OP1 U B2500 33.770 157.597 114.238 1.00 43.66 O
ATOM 4 OP2 U B2500 33.960 155.235 115.202 1.00 42.61 O
ATOM 5 O5' U B2500 33.405 155.609 112.815 1.00 42.53 O
ATOM 6 C5' U B2500 33.538 156.255 111.539 1.00 42.02 C
ATOM 7 C4' U B2500 32.872 155.433 110.474 1.00 41.86 C
ATOM 8 O4' U B2500 33.516 154.140 110.377 1.00 42.44 O
ATOM 9 C3' U B2500 31.420 155.114 110.749 1.00 43.27 C
ATOM 10 O3' U B2500 30.640 156.212 110.302 1.00 49.17 O
ATOM 11 C2' U B2500 31.201 153.862 109.916 1.00 41.48 C
ATOM 12 O2' U B2500 31.015 154.182 108.556 1.00 42.26 O
ATOM 13 C1' U B2500 32.549 153.152 110.078 1.00 39.52 C
ATOM 14 N1 U B2500 32.594 152.125 111.132 1.00 36.93 N
ATOM 15 C2 U B2500 32.015 150.900 110.858 1.00 34.25 C
ATOM 16 O2 U B2500 31.432 150.666 109.821 1.00 33.83 O
ATOM 17 N3 U B2500 32.143 149.961 111.850 1.00 35.06 N
ATOM 18 C4 U B2500 32.755 150.125 113.076 1.00 34.50 C
ATOM 19 O4 U B2500 32.784 149.180 113.868 1.00 34.32 O
ATOM 20 C5 U B2500 33.306 151.424 113.298 1.00 32.80 C
ATOM 21 C6 U B2500 33.207 152.358 112.345 1.00 35.07 C
ATOM 22 P G B2501 29.090 156.319 110.703 1.00 50.39 P
ATOM 23 OP1 G B2501 28.621 157.484 109.900 1.00 48.64 O
ATOM 24 OP2 G B2501 28.936 156.328 112.183 1.00 45.70 O
ATOM 25 O5' G B2501 28.466 154.978 110.102 1.00 47.87 O
TER

Atoms:
OP1: (39.647,155.885,118.355)
OP2: (39.310,153.411,117.873)
C3': (36.457,154.969,113.588)
C1': (37.917,153.555,112.414)
C5': (37.998,155.028,115.647)
O6: (35.752,147.994,112.763)
O4': (38.650,154.097,113.499)
C8: (37.785,151.545,113.954)
C2: (35.554,150.578,110.332)
C6: (35.924,149.104,112.256)
C5: (36.630,150.199,112.783)
C4: (36.747,151.342,112.026)
P: (39.877,154.724,117.491)
C4': (37.866,155.147,114.143)
C2': (36.739,154.497,112.170)
O2': (37.186,155.548,111.335)
N1: (35.399,149.389,110.997)
N2: (34.944,150.690,109.144)
N3: (36.247,151.595,110.802)
N7: (37.283,150.342,113.998)
N9: (37.498,152.207,112.784)
O5': (39.379,155.106,116.025)
O3': (35.719,156.186,113.632)
C4: (32.755,150.125,113.076)
N3: (32.143,149.961,111.850)
OP1: (33.770,157.597,114.238)
OP2: (33.960,155.235,115.202)
C2: (32.015,150.900,110.858)
C1': (32.549,153.152,110.078)
C3': (31.420,155.114,110.749)
O5': (33.405,155.609,112.815)
O4': (33.516,154.140,110.377)
C5': (33.538,156.255,111.539)
P: (34.173,156.177,114.085)
C4': (32.872,155.433,110.474)
C2': (31.201,153.862,109.916)
O2': (31.015,154.182,108.556)
N1: (32.594,152.125,111.132)
O4: (32.784,149.180,113.868)
O2: (31.432,150.666,109.821)
C6: (33.207,152.358,112.345)
C5: (33.306,151.424,113.298)
O3': (30.640,156.212,110.302)
Image (generated by PyMOL):
PyMOL image
show in jmol