ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A418:A367

Extra

PDB:
ATOM 1 O3' A A 417 82.750 103.222 19.657 1.00 57.81 O
ATOM 2 P A A 418 83.168 104.506 18.784 1.00 58.68 P
ATOM 3 OP1 A A 418 82.213 105.604 19.088 1.00 57.08 O
ATOM 4 OP2 A A 418 83.372 104.076 17.371 1.00 58.06 O
ATOM 5 O5' A A 418 84.557 104.945 19.403 1.00 56.05 O
ATOM 6 C5' A A 418 84.654 105.300 20.775 1.00 54.60 C
ATOM 7 C4' A A 418 86.043 105.026 21.240 1.00 54.05 C
ATOM 8 O4' A A 418 86.333 103.602 21.097 1.00 55.00 O
ATOM 9 C3' A A 418 87.051 105.651 20.305 1.00 52.86 C
ATOM 10 O3' A A 418 87.191 107.028 20.512 1.00 50.63 O
ATOM 11 C2' A A 418 88.300 104.851 20.596 1.00 53.87 C
ATOM 12 O2' A A 418 88.935 105.296 21.766 1.00 53.59 O
ATOM 13 C1' A A 418 87.711 103.440 20.764 1.00 55.52 C
ATOM 14 N9 A A 418 87.810 102.679 19.515 1.00 57.13 N
ATOM 15 C8 A A 418 86.955 102.729 18.450 1.00 58.44 C
ATOM 16 N7 A A 418 87.326 101.984 17.438 1.00 59.49 N
ATOM 17 C5 A A 418 88.496 101.384 17.877 1.00 58.86 C
ATOM 18 C6 A A 418 89.384 100.487 17.264 1.00 59.61 C
ATOM 19 N6 A A 418 89.221 100.022 16.027 1.00 61.15 N
ATOM 20 N1 A A 418 90.464 100.085 17.972 1.00 59.78 N
ATOM 21 C2 A A 418 90.631 100.575 19.206 1.00 59.77 C
ATOM 22 N3 A A 418 89.868 101.424 19.883 1.00 58.70 N
ATOM 23 C4 A A 418 88.803 101.795 19.155 1.00 57.99 C
ATOM 24 P G A 419 87.549 107.958 19.263 1.00 49.61 P
ATOM 25 OP1 G A 419 88.790 107.347 18.694 1.00 49.47 O
ATOM 26 OP2 G A 419 87.542 109.378 19.661 1.00 49.91 O
ATOM 27 O5' G A 419 86.336 107.748 18.259 1.00 46.69 O
TER

ATOM 1 O3' A B 366 89.016 102.374 11.159 1.00 67.76 O
ATOM 2 P G B 367 89.392 101.594 12.519 1.00 67.12 P
ATOM 3 OP1 G B 367 90.629 100.795 12.278 1.00 66.63 O
ATOM 4 OP2 G B 367 88.153 100.906 12.996 1.00 68.24 O
ATOM 5 O5' G B 367 89.750 102.757 13.548 1.00 65.55 O
ATOM 6 C5' G B 367 90.791 103.712 13.245 1.00 61.27 C
ATOM 7 C4' G B 367 90.722 104.898 14.186 1.00 58.42 C
ATOM 8 O4' G B 367 89.634 105.784 13.823 1.00 57.56 O
ATOM 9 C3' G B 367 90.515 104.592 15.661 1.00 57.71 C
ATOM 10 O3' G B 367 91.180 105.564 16.464 1.00 56.67 O
ATOM 11 C2' G B 367 88.994 104.610 15.784 1.00 56.40 C
ATOM 12 O2' G B 367 88.477 104.819 17.084 1.00 56.29 O
ATOM 13 C1' G B 367 88.600 105.704 14.789 1.00 55.37 C
ATOM 14 N9 G B 367 87.381 105.334 14.081 1.00 54.60 N
ATOM 15 C8 G B 367 86.849 104.070 13.973 1.00 55.32 C
ATOM 16 N7 G B 367 85.757 104.030 13.266 1.00 55.30 N
ATOM 17 C5 G B 367 85.550 105.348 12.890 1.00 55.10 C
ATOM 18 C6 G B 367 84.529 105.914 12.107 1.00 55.64 C
ATOM 19 O6 G B 367 83.555 105.348 11.590 1.00 56.03 O
ATOM 20 N1 G B 367 84.712 107.284 11.944 1.00 55.67 N
ATOM 21 C2 G B 367 85.744 108.014 12.477 1.00 55.50 C
ATOM 22 N2 G B 367 85.741 109.326 12.200 1.00 54.69 N
ATOM 23 N3 G B 367 86.705 107.493 13.223 1.00 55.07 N
ATOM 24 C4 G B 367 86.547 106.165 13.385 1.00 54.62 C
ATOM 25 P A B 368 92.709 105.301 16.899 1.00 58.20 P
ATOM 26 OP1 A B 368 93.301 106.568 17.408 1.00 57.42 O
ATOM 27 OP2 A B 368 93.344 104.608 15.745 1.00 58.93 O
ATOM 28 O5' A B 368 92.645 104.226 18.085 1.00 56.98 O
TER

Atoms:
OP1: (82.213,105.604,19.088)
OP2: (83.372,104.076,17.371)
C3': (87.051,105.651,20.305)
C1': (87.711,103.440,20.764)
C5': (84.654,105.300,20.775)
O4': (86.333,103.602,21.097)
C8: (86.955,102.729,18.450)
O2': (88.935,105.296,21.766)
C6: (89.384,100.487,17.264)
C5: (88.496,101.384,17.877)
C4: (88.803,101.795,19.155)
P: (83.168,104.506,18.784)
C4': (86.043,105.026,21.240)
C2': (88.300,104.851,20.596)
C2: (90.631,100.575,19.206)
N1: (90.464,100.085,17.972)
N3: (89.868,101.424,19.883)
N6: (89.221,100.022,16.027)
N7: (87.326,101.984,17.438)
N9: (87.810,102.679,19.515)
O5': (84.557,104.945,19.403)
O3': (87.191,107.028,20.512)
OP1: (90.629,100.795,12.278)
OP2: (88.153,100.906,12.996)
C3': (90.515,104.592,15.661)
C1': (88.600,105.704,14.789)
C5': (90.791,103.712,13.245)
O6: (83.555,105.348,11.590)
O4': (89.634,105.784,13.823)
C8: (86.849,104.070,13.973)
C2: (85.744,108.014,12.477)
C6: (84.529,105.914,12.107)
C5: (85.550,105.348,12.890)
C4: (86.547,106.165,13.385)
P: (89.392,101.594,12.519)
C4': (90.722,104.898,14.186)
C2': (88.994,104.610,15.784)
O2': (88.477,104.819,17.084)
N1: (84.712,107.284,11.944)
N2: (85.741,109.326,12.200)
N3: (86.705,107.493,13.223)
N7: (85.757,104.030,13.266)
N9: (87.381,105.334,14.081)
O5': (89.750,102.757,13.548)
O3': (91.180,105.564,16.464)
Image (generated by PyMOL):
PyMOL image
show in jmol