ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01220:01219

Extra

PDB:
ATOM 1 O3' G A1219 18.321 97.320 97.490 1.00 37.01 O
ATOM 2 P A A1220 17.377 96.034 97.318 1.00 37.16 P
ATOM 3 OP1 A A1220 17.452 95.631 95.890 1.00 33.89 O
ATOM 4 OP2 A A1220 16.065 96.350 97.916 1.00 36.25 O
ATOM 5 O5' A A1220 18.076 94.913 98.207 1.00 35.30 O
ATOM 6 C5' A A1220 19.255 94.213 97.756 1.00 35.30 C
ATOM 7 C4' A A1220 19.641 93.164 98.773 1.00 37.16 C
ATOM 8 O4' A A1220 20.053 93.806 100.009 1.00 37.29 O
ATOM 9 C3' A A1220 18.494 92.229 99.130 1.00 36.45 C
ATOM 10 O3' A A1220 18.680 91.010 98.421 1.00 37.00 O
ATOM 11 C2' A A1220 18.625 92.049 100.642 1.00 36.28 C
ATOM 12 O2' A A1220 19.575 91.058 100.966 1.00 34.65 O
ATOM 13 C1' A A1220 19.216 93.398 101.065 1.00 36.88 C
ATOM 14 N9 A A1220 18.324 94.521 101.381 1.00 36.58 N
ATOM 15 C8 A A1220 18.521 95.824 100.988 1.00 37.70 C
ATOM 16 N7 A A1220 17.651 96.668 101.485 1.00 37.23 N
ATOM 17 C5 A A1220 16.804 95.868 102.237 1.00 36.63 C
ATOM 18 C6 A A1220 15.688 96.169 103.029 1.00 35.02 C
ATOM 19 N6 A A1220 15.202 97.404 103.192 1.00 32.31 N
ATOM 20 N1 A A1220 15.076 95.145 103.657 1.00 34.65 N
ATOM 21 C2 A A1220 15.553 93.908 103.481 1.00 33.91 C
ATOM 22 N3 A A1220 16.589 93.498 102.758 1.00 36.11 N
ATOM 23 C4 A A1220 17.188 94.538 102.159 1.00 36.79 C
ATOM 24 P C A1221 17.635 90.577 97.286 1.00 38.71 P
ATOM 25 OP1 C A1221 18.248 89.489 96.482 1.00 36.04 O
ATOM 26 OP2 C A1221 17.130 91.801 96.610 1.00 38.45 O
ATOM 27 O5' C A1221 16.434 89.958 98.118 1.00 39.93 O
TER

ATOM 1 O3' A B1218 17.294 101.545 102.098 1.00 38.27 O
ATOM 2 P G B1219 16.076 101.185 101.115 1.00 37.46 P
ATOM 3 OP1 G B1219 15.438 102.480 100.754 1.00 38.91 O
ATOM 4 OP2 G B1219 15.261 100.105 101.732 1.00 40.67 O
ATOM 5 O5' G B1219 16.775 100.590 99.817 1.00 35.21 O
ATOM 6 C5' G B1219 16.012 99.918 98.808 1.00 34.94 C
ATOM 7 C4' G B1219 16.940 99.244 97.825 1.00 38.14 C
ATOM 8 O4' G B1219 17.682 100.266 97.096 1.00 37.34 O
ATOM 9 C3' G B1219 17.992 98.326 98.442 1.00 36.73 C
ATOM 10 O3' G B1219 18.321 97.320 97.490 1.00 37.01 O
ATOM 11 C2' G B1219 19.184 99.271 98.586 1.00 37.47 C
ATOM 12 O2' G B1219 20.430 98.612 98.646 1.00 35.96 O
ATOM 13 C1' G B1219 19.063 100.071 97.290 1.00 36.59 C
ATOM 14 N9 G B1219 19.722 101.374 97.265 1.00 38.32 N
ATOM 15 C8 G B1219 19.506 102.449 98.097 1.00 36.97 C
ATOM 16 N7 G B1219 20.248 103.481 97.799 1.00 36.13 N
ATOM 17 C5 G B1219 21.003 103.060 96.710 1.00 36.64 C
ATOM 18 C6 G B1219 21.995 103.746 95.943 1.00 37.17 C
ATOM 19 O6 G B1219 22.404 104.907 96.066 1.00 35.66 O
ATOM 20 N1 G B1219 22.508 102.940 94.936 1.00 36.31 N
ATOM 21 C2 G B1219 22.114 101.654 94.676 1.00 37.53 C
ATOM 22 N2 G B1219 22.720 101.046 93.642 1.00 39.18 N
ATOM 23 N3 G B1219 21.193 101.008 95.373 1.00 37.07 N
ATOM 24 C4 G B1219 20.689 101.764 96.369 1.00 35.72 C
ATOM 25 P A B1220 17.377 96.034 97.318 1.00 37.16 P
ATOM 26 OP1 A B1220 17.452 95.631 95.890 1.00 33.89 O
ATOM 27 OP2 A B1220 16.065 96.350 97.916 1.00 36.25 O
ATOM 28 O5' A B1220 18.076 94.913 98.207 1.00 35.30 O
TER

Atoms:
OP1: (17.452,95.631,95.890)
OP2: (16.065,96.350,97.916)
C3': (18.494,92.229,99.130)
C1': (19.216,93.398,101.065)
C5': (19.255,94.213,97.756)
O4': (20.053,93.806,100.009)
C8: (18.521,95.824,100.988)
O2': (19.575,91.058,100.966)
C6: (15.688,96.169,103.029)
C5: (16.804,95.868,102.237)
C4: (17.188,94.538,102.159)
P: (17.377,96.034,97.318)
C4': (19.641,93.164,98.773)
C2': (18.625,92.049,100.642)
C2: (15.553,93.908,103.481)
N1: (15.076,95.145,103.657)
N3: (16.589,93.498,102.758)
N6: (15.202,97.404,103.192)
N7: (17.651,96.668,101.485)
N9: (18.324,94.521,101.381)
O5': (18.076,94.913,98.207)
O3': (18.680,91.010,98.421)
OP1: (15.438,102.480,100.754)
OP2: (15.261,100.105,101.732)
C3': (17.992,98.326,98.442)
C1': (19.063,100.071,97.290)
C5': (16.012,99.918,98.808)
O6: (22.404,104.907,96.066)
O4': (17.682,100.266,97.096)
C8: (19.506,102.449,98.097)
C2: (22.114,101.654,94.676)
C6: (21.995,103.746,95.943)
C5: (21.003,103.060,96.710)
C4: (20.689,101.764,96.369)
P: (16.076,101.185,101.115)
C4': (16.940,99.244,97.825)
C2': (19.184,99.271,98.586)
O2': (20.430,98.612,98.646)
N1: (22.508,102.940,94.936)
N2: (22.720,101.046,93.642)
N3: (21.193,101.008,95.373)
N7: (20.248,103.481,97.799)
N9: (19.722,101.374,97.265)
O5': (16.775,100.590,99.817)
O3': (18.321,97.320,97.490)
Image (generated by PyMOL):
PyMOL image
show in jmol