ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01080:01081

Extra

PDB:
ATOM 1 O3' U A1079 39.933 102.970 132.587 1.00 36.86 O
ATOM 2 P G A1080 39.824 103.586 131.108 1.00 35.68 P
ATOM 3 OP1 G A1080 40.888 102.918 130.322 1.00 38.95 O
ATOM 4 OP2 G A1080 39.788 105.061 131.184 1.00 32.70 O
ATOM 5 O5' G A1080 38.411 103.062 130.596 1.00 33.99 O
ATOM 6 C5' G A1080 38.089 101.659 130.655 1.00 32.50 C
ATOM 7 C4' G A1080 36.596 101.466 130.665 1.00 33.46 C
ATOM 8 O4' G A1080 36.040 102.134 131.827 1.00 35.71 O
ATOM 9 C3' G A1080 35.846 102.092 129.507 1.00 33.74 C
ATOM 10 O3' G A1080 35.900 101.276 128.345 1.00 35.44 O
ATOM 11 C2' G A1080 34.444 102.221 130.083 1.00 32.87 C
ATOM 12 O2' G A1080 33.770 100.986 130.139 1.00 30.76 O
ATOM 13 C1' G A1080 34.760 102.658 131.512 1.00 32.53 C
ATOM 14 N9 G A1080 34.822 104.111 131.621 1.00 32.34 N
ATOM 15 C8 G A1080 35.950 104.895 131.643 1.00 32.42 C
ATOM 16 N7 G A1080 35.683 106.173 131.707 1.00 33.38 N
ATOM 17 C5 G A1080 34.296 106.235 131.742 1.00 30.71 C
ATOM 18 C6 G A1080 33.433 107.350 131.817 1.00 30.45 C
ATOM 19 O6 G A1080 33.726 108.550 131.885 1.00 29.71 O
ATOM 20 N1 G A1080 32.098 106.962 131.816 1.00 32.12 N
ATOM 21 C2 G A1080 31.649 105.666 131.757 1.00 33.23 C
ATOM 22 N2 G A1080 30.315 105.495 131.755 1.00 32.38 N
ATOM 23 N3 G A1080 32.447 104.615 131.699 1.00 32.87 N
ATOM 24 C4 G A1080 33.749 104.971 131.694 1.00 32.30 C
ATOM 25 P U A1081 35.796 101.955 126.892 1.00 37.40 P
ATOM 26 OP1 U A1081 35.735 100.864 125.885 1.00 39.61 O
ATOM 27 OP2 U A1081 36.845 102.994 126.783 1.00 35.24 O
ATOM 28 O5' U A1081 34.374 102.668 126.909 1.00 37.42 O
TER

ATOM 1 O3' G B1080 35.900 101.276 128.345 1.00 35.44 O
ATOM 2 P U B1081 35.796 101.955 126.892 1.00 37.40 P
ATOM 3 OP1 U B1081 35.735 100.864 125.885 1.00 39.61 O
ATOM 4 OP2 U B1081 36.845 102.994 126.783 1.00 35.24 O
ATOM 5 O5' U B1081 34.374 102.668 126.909 1.00 37.42 O
ATOM 6 C5' U B1081 33.178 101.884 126.818 1.00 34.99 C
ATOM 7 C4' U B1081 31.970 102.777 126.763 1.00 36.71 C
ATOM 8 O4' U B1081 31.890 103.564 127.978 1.00 36.81 O
ATOM 9 C3' U B1081 31.946 103.843 125.685 1.00 37.89 C
ATOM 10 O3' U B1081 31.600 103.331 124.406 1.00 41.31 O
ATOM 11 C2' U B1081 30.860 104.762 126.214 1.00 37.61 C
ATOM 12 O2' U B1081 29.568 104.213 126.020 1.00 39.78 O
ATOM 13 C1' U B1081 31.191 104.767 127.706 1.00 35.98 C
ATOM 14 N1 U B1081 32.039 105.915 128.059 1.00 35.69 N
ATOM 15 C2 U B1081 31.400 107.103 128.349 1.00 35.98 C
ATOM 16 O2 U B1081 30.194 107.212 128.364 1.00 40.70 O
ATOM 17 N3 U B1081 32.225 108.163 128.614 1.00 35.71 N
ATOM 18 C4 U B1081 33.595 108.159 128.619 1.00 35.02 C
ATOM 19 O4 U B1081 34.196 109.208 128.832 1.00 35.67 O
ATOM 20 C5 U B1081 34.189 106.891 128.336 1.00 35.58 C
ATOM 21 C6 U B1081 33.410 105.835 128.077 1.00 36.53 C
ATOM 22 P A B1082 32.200 104.026 123.086 1.00 41.39 P
ATOM 23 OP1 A B1082 32.064 105.503 123.207 1.00 39.80 O
ATOM 24 OP2 A B1082 31.616 103.317 121.916 1.00 39.77 O
ATOM 25 O5' A B1082 33.751 103.690 123.153 1.00 42.83 O
TER

Atoms:
OP1: (40.888,102.918,130.322)
OP2: (39.788,105.061,131.184)
C3': (35.846,102.092,129.507)
C1': (34.760,102.658,131.512)
C5': (38.089,101.659,130.655)
O6: (33.726,108.550,131.885)
O4': (36.040,102.134,131.827)
C8: (35.950,104.895,131.643)
C2: (31.649,105.666,131.757)
C6: (33.433,107.350,131.817)
C5: (34.296,106.235,131.742)
C4: (33.749,104.971,131.694)
P: (39.824,103.586,131.108)
C4': (36.596,101.466,130.665)
C2': (34.444,102.221,130.083)
O2': (33.770,100.986,130.139)
N1: (32.098,106.962,131.816)
N2: (30.315,105.495,131.755)
N3: (32.447,104.615,131.699)
N7: (35.683,106.173,131.707)
N9: (34.822,104.111,131.621)
O5': (38.411,103.062,130.596)
O3': (35.900,101.276,128.345)
C4: (33.595,108.159,128.619)
N3: (32.225,108.163,128.614)
OP1: (35.735,100.864,125.885)
OP2: (36.845,102.994,126.783)
C2: (31.400,107.103,128.349)
C1': (31.191,104.767,127.706)
C3': (31.946,103.843,125.685)
O5': (34.374,102.668,126.909)
O4': (31.890,103.564,127.978)
C5': (33.178,101.884,126.818)
P: (35.796,101.955,126.892)
C4': (31.970,102.777,126.763)
C2': (30.860,104.762,126.214)
O2': (29.568,104.213,126.020)
N1: (32.039,105.915,128.059)
O4: (34.196,109.208,128.832)
O2: (30.194,107.212,128.364)
C6: (33.410,105.835,128.077)
C5: (34.189,106.891,128.336)
O3': (31.600,103.331,124.406)
Image (generated by PyMOL):
PyMOL image
show in jmol