ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0418:0367

Extra

PDB:
ATOM 1 O3' A A 417 82.104 102.267 18.537 1.00 49.55 O
ATOM 2 P A A 418 82.626 103.448 17.584 1.00 51.23 P
ATOM 3 OP1 A A 418 81.688 104.587 17.710 1.00 53.58 O
ATOM 4 OP2 A A 418 82.901 102.874 16.247 1.00 51.10 O
ATOM 5 O5' A A 418 84.007 103.870 18.253 1.00 49.39 O
ATOM 6 C5' A A 418 84.062 104.258 19.633 1.00 43.83 C
ATOM 7 C4' A A 418 85.455 104.048 20.173 1.00 45.06 C
ATOM 8 O4' A A 418 85.768 102.629 20.197 1.00 43.31 O
ATOM 9 C3' A A 418 86.570 104.663 19.345 1.00 42.71 C
ATOM 10 O3' A A 418 86.727 106.046 19.627 1.00 43.51 O
ATOM 11 C2' A A 418 87.772 103.828 19.760 1.00 43.01 C
ATOM 12 O2' A A 418 88.310 104.195 21.005 1.00 46.14 O
ATOM 13 C1' A A 418 87.141 102.441 19.887 1.00 43.71 C
ATOM 14 N9 A A 418 87.227 101.732 18.613 1.00 44.80 N
ATOM 15 C8 A A 418 86.366 101.808 17.546 1.00 42.57 C
ATOM 16 N7 A A 418 86.744 101.096 16.514 1.00 45.49 N
ATOM 17 C5 A A 418 87.925 100.502 16.934 1.00 43.56 C
ATOM 18 C6 A A 418 88.818 99.637 16.296 1.00 43.80 C
ATOM 19 N6 A A 418 88.659 99.214 15.042 1.00 45.45 N
ATOM 20 N1 A A 418 89.897 99.217 16.992 1.00 43.26 N
ATOM 21 C2 A A 418 90.059 99.656 18.244 1.00 45.54 C
ATOM 22 N3 A A 418 89.289 100.483 18.952 1.00 45.57 N
ATOM 23 C4 A A 418 88.226 100.873 18.229 1.00 43.92 C
ATOM 24 P G A 419 87.023 107.083 18.427 1.00 45.33 P
ATOM 25 OP1 G A 419 88.283 106.680 17.748 1.00 43.25 O
ATOM 26 OP2 G A 419 86.910 108.447 18.985 1.00 46.19 O
ATOM 27 O5' G A 419 85.810 106.876 17.423 1.00 40.84 O
TER

ATOM 1 O3' A B 366 88.275 101.551 10.424 1.00 57.92 O
ATOM 2 P G B 367 88.610 100.813 11.815 1.00 57.53 P
ATOM 3 OP1 G B 367 89.857 100.020 11.649 1.00 53.21 O
ATOM 4 OP2 G B 367 87.365 100.146 12.290 1.00 55.44 O
ATOM 5 O5' G B 367 88.932 102.027 12.797 1.00 56.03 O
ATOM 6 C5' G B 367 90.095 102.855 12.584 1.00 51.06 C
ATOM 7 C4' G B 367 90.061 104.066 13.488 1.00 48.25 C
ATOM 8 O4' G B 367 88.981 104.951 13.103 1.00 48.05 O
ATOM 9 C3' G B 367 89.877 103.814 14.975 1.00 48.85 C
ATOM 10 O3' G B 367 90.570 104.808 15.727 1.00 47.71 O
ATOM 11 C2' G B 367 88.359 103.875 15.128 1.00 49.12 C
ATOM 12 O2' G B 367 87.921 104.232 16.426 1.00 48.97 O
ATOM 13 C1' G B 367 87.946 104.903 14.061 1.00 47.56 C
ATOM 14 N9 G B 367 86.723 104.523 13.354 1.00 48.48 N
ATOM 15 C8 G B 367 86.182 103.259 13.283 1.00 47.16 C
ATOM 16 N7 G B 367 85.087 103.207 12.581 1.00 46.87 N
ATOM 17 C5 G B 367 84.885 104.507 12.153 1.00 47.45 C
ATOM 18 C6 G B 367 83.857 105.045 11.350 1.00 49.43 C
ATOM 19 O6 G B 367 82.901 104.454 10.830 1.00 50.11 O
ATOM 20 N1 G B 367 84.016 106.414 11.161 1.00 50.50 N
ATOM 21 C2 G B 367 85.047 107.165 11.673 1.00 50.21 C
ATOM 22 N2 G B 367 85.015 108.475 11.379 1.00 49.61 N
ATOM 23 N3 G B 367 86.031 106.668 12.418 1.00 48.80 N
ATOM 24 C4 G B 367 85.883 105.341 12.621 1.00 47.91 C
ATOM 25 P A B 368 92.110 104.563 16.136 1.00 52.05 P
ATOM 26 OP1 A B 368 92.625 105.819 16.729 1.00 53.24 O
ATOM 27 OP2 A B 368 92.798 103.973 14.960 1.00 51.14 O
ATOM 28 O5' A B 368 92.073 103.449 17.282 1.00 50.75 O
TER

Atoms:
OP1: (81.688,104.587,17.710)
OP2: (82.901,102.874,16.247)
C3': (86.570,104.663,19.345)
C1': (87.141,102.441,19.887)
C5': (84.062,104.258,19.633)
O4': (85.768,102.629,20.197)
C8: (86.366,101.808,17.546)
O2': (88.310,104.195,21.005)
C6: (88.818,99.637,16.296)
C5: (87.925,100.502,16.934)
C4: (88.226,100.873,18.229)
P: (82.626,103.448,17.584)
C4': (85.455,104.048,20.173)
C2': (87.772,103.828,19.760)
C2: (90.059,99.656,18.244)
N1: (89.897,99.217,16.992)
N3: (89.289,100.483,18.952)
N6: (88.659,99.214,15.042)
N7: (86.744,101.096,16.514)
N9: (87.227,101.732,18.613)
O5': (84.007,103.870,18.253)
O3': (86.727,106.046,19.627)
OP1: (89.857,100.020,11.649)
OP2: (87.365,100.146,12.290)
C3': (89.877,103.814,14.975)
C1': (87.946,104.903,14.061)
C5': (90.095,102.855,12.584)
O6: (82.901,104.454,10.830)
O4': (88.981,104.951,13.103)
C8: (86.182,103.259,13.283)
C2: (85.047,107.165,11.673)
C6: (83.857,105.045,11.350)
C5: (84.885,104.507,12.153)
C4: (85.883,105.341,12.621)
P: (88.610,100.813,11.815)
C4': (90.061,104.066,13.488)
C2': (88.359,103.875,15.128)
O2': (87.921,104.232,16.426)
N1: (84.016,106.414,11.161)
N2: (85.015,108.475,11.379)
N3: (86.031,106.668,12.418)
N7: (85.087,103.207,12.581)
N9: (86.723,104.523,13.354)
O5': (88.932,102.027,12.797)
O3': (90.570,104.808,15.727)
Image (generated by PyMOL):
PyMOL image
show in jmol