ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01220:01219

Extra

PDB:
ATOM 1 O3' G A1219 18.356 97.380 97.574 1.00 37.49 O
ATOM 2 P A A1220 17.428 96.078 97.424 1.00 37.73 P
ATOM 3 OP1 A A1220 17.481 95.625 96.001 1.00 34.23 O
ATOM 4 OP2 A A1220 16.126 96.384 98.038 1.00 37.43 O
ATOM 5 O5' A A1220 18.148 94.995 98.340 1.00 35.44 O
ATOM 6 C5' A A1220 19.344 94.316 97.911 1.00 38.07 C
ATOM 7 C4' A A1220 19.724 93.276 98.937 1.00 40.82 C
ATOM 8 O4' A A1220 20.098 93.932 100.177 1.00 40.90 O
ATOM 9 C3' A A1220 18.573 92.340 99.274 1.00 41.45 C
ATOM 10 O3' A A1220 18.764 91.119 98.562 1.00 41.35 O
ATOM 11 C2' A A1220 18.671 92.167 100.788 1.00 40.06 C
ATOM 12 O2' A A1220 19.623 91.182 101.129 1.00 39.35 O
ATOM 13 C1' A A1220 19.243 93.520 101.217 1.00 39.63 C
ATOM 14 N9 A A1220 18.350 94.644 101.527 1.00 39.88 N
ATOM 15 C8 A A1220 18.550 95.942 101.115 1.00 41.50 C
ATOM 16 N7 A A1220 17.681 96.796 101.595 1.00 39.72 N
ATOM 17 C5 A A1220 16.833 96.011 102.356 1.00 39.07 C
ATOM 18 C6 A A1220 15.712 96.327 103.132 1.00 37.73 C
ATOM 19 N6 A A1220 15.218 97.565 103.254 1.00 36.32 N
ATOM 20 N1 A A1220 15.102 95.320 103.781 1.00 35.40 N
ATOM 21 C2 A A1220 15.581 94.081 103.634 1.00 34.85 C
ATOM 22 N3 A A1220 16.613 93.653 102.925 1.00 36.77 N
ATOM 23 C4 A A1220 17.216 94.678 102.307 1.00 39.55 C
ATOM 24 P C A1221 17.725 90.687 97.423 1.00 41.48 P
ATOM 25 OP1 C A1221 18.340 89.585 96.634 1.00 39.78 O
ATOM 26 OP2 C A1221 17.247 91.910 96.730 1.00 40.95 O
ATOM 27 O5' C A1221 16.517 90.081 98.257 1.00 41.58 O
TER

ATOM 1 O3' A B1218 17.418 101.589 102.206 1.00 38.55 O
ATOM 2 P G B1219 16.187 101.237 101.233 1.00 37.11 P
ATOM 3 OP1 G B1219 15.489 102.513 100.953 1.00 37.20 O
ATOM 4 OP2 G B1219 15.428 100.094 101.820 1.00 41.73 O
ATOM 5 O5' G B1219 16.865 100.718 99.888 1.00 36.05 O
ATOM 6 C5' G B1219 16.095 99.999 98.910 1.00 36.37 C
ATOM 7 C4' G B1219 17.007 99.301 97.935 1.00 36.78 C
ATOM 8 O4' G B1219 17.761 100.299 97.197 1.00 34.72 O
ATOM 9 C3' G B1219 18.044 98.371 98.548 1.00 36.23 C
ATOM 10 O3' G B1219 18.356 97.380 97.574 1.00 37.49 O
ATOM 11 C2' G B1219 19.239 99.306 98.715 1.00 36.86 C
ATOM 12 O2' G B1219 20.480 98.648 98.773 1.00 35.98 O
ATOM 13 C1' G B1219 19.141 100.116 97.426 1.00 37.04 C
ATOM 14 N9 G B1219 19.780 101.429 97.435 1.00 39.02 N
ATOM 15 C8 G B1219 19.533 102.487 98.284 1.00 39.71 C
ATOM 16 N7 G B1219 20.235 103.551 97.993 1.00 39.18 N
ATOM 17 C5 G B1219 21.004 103.164 96.900 1.00 39.46 C
ATOM 18 C6 G B1219 21.969 103.890 96.142 1.00 39.57 C
ATOM 19 O6 G B1219 22.337 105.062 96.283 1.00 39.03 O
ATOM 20 N1 G B1219 22.512 103.112 95.127 1.00 38.84 N
ATOM 21 C2 G B1219 22.166 101.813 94.855 1.00 40.04 C
ATOM 22 N2 G B1219 22.788 101.235 93.809 1.00 40.77 N
ATOM 23 N3 G B1219 21.273 101.127 95.550 1.00 38.42 N
ATOM 24 C4 G B1219 20.738 101.858 96.549 1.00 37.70 C
ATOM 25 P A B1220 17.428 96.078 97.424 1.00 37.73 P
ATOM 26 OP1 A B1220 17.481 95.625 96.001 1.00 34.23 O
ATOM 27 OP2 A B1220 16.126 96.384 98.038 1.00 37.43 O
ATOM 28 O5' A B1220 18.148 94.995 98.340 1.00 35.44 O
TER

Atoms:
OP1: (17.481,95.625,96.001)
OP2: (16.126,96.384,98.038)
C3': (18.573,92.340,99.274)
C1': (19.243,93.520,101.217)
C5': (19.344,94.316,97.911)
O4': (20.098,93.932,100.177)
C8: (18.550,95.942,101.115)
O2': (19.623,91.182,101.129)
C6: (15.712,96.327,103.132)
C5: (16.833,96.011,102.356)
C4: (17.216,94.678,102.307)
P: (17.428,96.078,97.424)
C4': (19.724,93.276,98.937)
C2': (18.671,92.167,100.788)
C2: (15.581,94.081,103.634)
N1: (15.102,95.320,103.781)
N3: (16.613,93.653,102.925)
N6: (15.218,97.565,103.254)
N7: (17.681,96.796,101.595)
N9: (18.350,94.644,101.527)
O5': (18.148,94.995,98.340)
O3': (18.764,91.119,98.562)
OP1: (15.489,102.513,100.953)
OP2: (15.428,100.094,101.820)
C3': (18.044,98.371,98.548)
C1': (19.141,100.116,97.426)
C5': (16.095,99.999,98.910)
O6: (22.337,105.062,96.283)
O4': (17.761,100.299,97.197)
C8: (19.533,102.487,98.284)
C2: (22.166,101.813,94.855)
C6: (21.969,103.890,96.142)
C5: (21.004,103.164,96.900)
C4: (20.738,101.858,96.549)
P: (16.187,101.237,101.233)
C4': (17.007,99.301,97.935)
C2': (19.239,99.306,98.715)
O2': (20.480,98.648,98.773)
N1: (22.512,103.112,95.127)
N2: (22.788,101.235,93.809)
N3: (21.273,101.127,95.550)
N7: (20.235,103.551,97.993)
N9: (19.780,101.429,97.435)
O5': (16.865,100.718,99.888)
O3': (18.356,97.380,97.574)
Image (generated by PyMOL):
PyMOL image
show in jmol