ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01220:01219

Extra

PDB:
ATOM 1 O3' G A1219 18.478 98.151 97.419 1.00 31.42 O
ATOM 2 P A A1220 17.526 96.871 97.284 1.00 31.27 P
ATOM 3 OP1 A A1220 17.590 96.410 95.874 1.00 27.34 O
ATOM 4 OP2 A A1220 16.221 97.247 97.873 1.00 28.88 O
ATOM 5 O5' A A1220 18.208 95.776 98.216 1.00 28.82 O
ATOM 6 C5' A A1220 19.377 95.058 97.783 1.00 30.93 C
ATOM 7 C4' A A1220 19.748 94.012 98.806 1.00 32.08 C
ATOM 8 O4' A A1220 20.186 94.654 100.026 1.00 34.37 O
ATOM 9 C3' A A1220 18.611 93.080 99.181 1.00 31.40 C
ATOM 10 O3' A A1220 18.801 91.848 98.488 1.00 31.45 O
ATOM 11 C2' A A1220 18.762 92.915 100.690 1.00 32.06 C
ATOM 12 O2' A A1220 19.718 91.934 101.013 1.00 31.77 O
ATOM 13 C1' A A1220 19.360 94.263 101.092 1.00 33.09 C
ATOM 14 N9 A A1220 18.475 95.390 101.399 1.00 34.24 N
ATOM 15 C8 A A1220 18.668 96.684 100.978 1.00 33.89 C
ATOM 16 N7 A A1220 17.792 97.530 101.447 1.00 34.78 N
ATOM 17 C5 A A1220 16.948 96.744 102.216 1.00 34.12 C
ATOM 18 C6 A A1220 15.822 97.056 102.992 1.00 34.22 C
ATOM 19 N6 A A1220 15.347 98.293 103.146 1.00 34.21 N
ATOM 20 N1 A A1220 15.201 96.045 103.623 1.00 33.86 N
ATOM 21 C2 A A1220 15.699 94.809 103.490 1.00 34.24 C
ATOM 22 N3 A A1220 16.757 94.392 102.804 1.00 32.56 N
ATOM 23 C4 A A1220 17.345 95.419 102.180 1.00 33.19 C
ATOM 24 P C A1221 17.763 91.396 97.353 1.00 30.71 P
ATOM 25 OP1 C A1221 18.363 90.258 96.617 1.00 30.24 O
ATOM 26 OP2 C A1221 17.342 92.596 96.608 1.00 32.40 O
ATOM 27 O5' C A1221 16.515 90.872 98.186 1.00 31.78 O
TER

ATOM 1 O3' A B1218 17.488 102.369 101.947 1.00 36.42 O
ATOM 2 P G B1219 16.253 101.994 101.006 1.00 34.48 P
ATOM 3 OP1 G B1219 15.584 103.261 100.626 1.00 36.48 O
ATOM 4 OP2 G B1219 15.474 100.922 101.675 1.00 36.01 O
ATOM 5 O5' G B1219 16.954 101.390 99.717 1.00 33.40 O
ATOM 6 C5' G B1219 16.197 100.724 98.707 1.00 32.02 C
ATOM 7 C4' G B1219 17.133 100.087 97.725 1.00 32.31 C
ATOM 8 O4' G B1219 17.900 101.128 97.060 1.00 33.08 O
ATOM 9 C3' G B1219 18.159 99.165 98.364 1.00 33.76 C
ATOM 10 O3' G B1219 18.478 98.151 97.419 1.00 31.42 O
ATOM 11 C2' G B1219 19.340 100.107 98.591 1.00 34.98 C
ATOM 12 O2' G B1219 20.580 99.442 98.721 1.00 35.80 O
ATOM 13 C1' G B1219 19.276 100.938 97.314 1.00 35.52 C
ATOM 14 N9 G B1219 19.938 102.242 97.318 1.00 37.00 N
ATOM 15 C8 G B1219 19.735 103.292 98.181 1.00 36.36 C
ATOM 16 N7 G B1219 20.450 104.344 97.883 1.00 36.04 N
ATOM 17 C5 G B1219 21.180 103.961 96.765 1.00 36.69 C
ATOM 18 C6 G B1219 22.126 104.684 95.984 1.00 37.41 C
ATOM 19 O6 G B1219 22.516 105.845 96.125 1.00 39.61 O
ATOM 20 N1 G B1219 22.627 103.915 94.942 1.00 38.49 N
ATOM 21 C2 G B1219 22.268 102.622 94.673 1.00 40.17 C
ATOM 22 N2 G B1219 22.870 102.053 93.616 1.00 41.56 N
ATOM 23 N3 G B1219 21.386 101.936 95.385 1.00 39.53 N
ATOM 24 C4 G B1219 20.886 102.664 96.410 1.00 37.38 C
ATOM 25 P A B1220 17.526 96.871 97.284 1.00 31.27 P
ATOM 26 OP1 A B1220 17.590 96.410 95.874 1.00 27.34 O
ATOM 27 OP2 A B1220 16.221 97.247 97.873 1.00 28.88 O
ATOM 28 O5' A B1220 18.208 95.776 98.216 1.00 28.82 O
TER

Atoms:
OP1: (17.590,96.410,95.874)
OP2: (16.221,97.247,97.873)
C3': (18.611,93.080,99.181)
C1': (19.360,94.263,101.092)
C5': (19.377,95.058,97.783)
O4': (20.186,94.654,100.026)
C8: (18.668,96.684,100.978)
O2': (19.718,91.934,101.013)
C6: (15.822,97.056,102.992)
C5: (16.948,96.744,102.216)
C4: (17.345,95.419,102.180)
P: (17.526,96.871,97.284)
C4': (19.748,94.012,98.806)
C2': (18.762,92.915,100.690)
C2: (15.699,94.809,103.490)
N1: (15.201,96.045,103.623)
N3: (16.757,94.392,102.804)
N6: (15.347,98.293,103.146)
N7: (17.792,97.530,101.447)
N9: (18.475,95.390,101.399)
O5': (18.208,95.776,98.216)
O3': (18.801,91.848,98.488)
OP1: (15.584,103.261,100.626)
OP2: (15.474,100.922,101.675)
C3': (18.159,99.165,98.364)
C1': (19.276,100.938,97.314)
C5': (16.197,100.724,98.707)
O6: (22.516,105.845,96.125)
O4': (17.900,101.128,97.060)
C8: (19.735,103.292,98.181)
C2: (22.268,102.622,94.673)
C6: (22.126,104.684,95.984)
C5: (21.180,103.961,96.765)
C4: (20.886,102.664,96.410)
P: (16.253,101.994,101.006)
C4': (17.133,100.087,97.725)
C2': (19.340,100.107,98.591)
O2': (20.580,99.442,98.721)
N1: (22.627,103.915,94.942)
N2: (22.870,102.053,93.616)
N3: (21.386,101.936,95.385)
N7: (20.450,104.344,97.883)
N9: (19.938,102.242,97.318)
O5': (16.954,101.390,99.717)
O3': (18.478,98.151,97.419)
Image (generated by PyMOL):
PyMOL image
show in jmol