Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01220:01219
Extra
PDB:
ATOM 1 O3' G A1219 18.548 98.495 97.619 1.00 42.60 O
ATOM 2 P A A1220 17.566 97.231 97.551 1.00 42.72 P
ATOM 3 OP1 A A1220 17.542 96.690 96.155 1.00 40.58 O
ATOM 4 OP2 A A1220 16.299 97.657 98.202 1.00 39.14 O
ATOM 5 O5' A A1220 18.267 96.145 98.476 1.00 41.86 O
ATOM 6 C5' A A1220 19.368 95.360 97.991 1.00 42.73 C
ATOM 7 C4' A A1220 19.787 94.368 99.047 1.00 43.91 C
ATOM 8 O4' A A1220 20.229 95.088 100.227 1.00 44.15 O
ATOM 9 C3' A A1220 18.684 93.419 99.495 1.00 41.80 C
ATOM 10 O3' A A1220 18.874 92.158 98.846 1.00 42.39 O
ATOM 11 C2' A A1220 18.907 93.302 101.000 1.00 41.14 C
ATOM 12 O2' A A1220 19.918 92.362 101.290 1.00 37.97 O
ATOM 13 C1' A A1220 19.472 94.684 101.340 1.00 41.94 C
ATOM 14 N9 A A1220 18.574 95.791 101.687 1.00 41.31 N
ATOM 15 C8 A A1220 18.752 97.088 101.281 1.00 40.10 C
ATOM 16 N7 A A1220 17.887 97.923 101.789 1.00 42.09 N
ATOM 17 C5 A A1220 17.064 97.123 102.564 1.00 40.26 C
ATOM 18 C6 A A1220 15.960 97.422 103.374 1.00 40.45 C
ATOM 19 N6 A A1220 15.468 98.652 103.532 1.00 40.00 N
ATOM 20 N1 A A1220 15.371 96.405 104.026 1.00 40.17 N
ATOM 21 C2 A A1220 15.864 95.174 103.861 1.00 40.27 C
ATOM 22 N3 A A1220 16.895 94.767 103.124 1.00 40.43 N
ATOM 23 C4 A A1220 17.462 95.803 102.495 1.00 39.81 C
ATOM 24 P C A1221 17.886 91.703 97.664 1.00 42.87 P
ATOM 25 OP1 C A1221 18.518 90.562 96.948 1.00 42.02 O
ATOM 26 OP2 C A1221 17.504 92.917 96.899 1.00 44.02 O
ATOM 27 O5' C A1221 16.620 91.150 98.454 1.00 41.65 O
TER
ATOM 1 O3' A B1218 17.635 102.727 102.302 1.00 42.84 O
ATOM 2 P G B1219 16.414 102.347 101.339 1.00 42.18 P
ATOM 3 OP1 G B1219 15.794 103.634 100.967 1.00 43.58 O
ATOM 4 OP2 G B1219 15.588 101.280 101.965 1.00 41.42 O
ATOM 5 O5' G B1219 17.130 101.726 100.064 1.00 41.70 O
ATOM 6 C5' G B1219 16.372 101.058 99.057 1.00 42.78 C
ATOM 7 C4' G B1219 17.293 100.451 98.039 1.00 43.27 C
ATOM 8 O4' G B1219 18.044 101.505 97.377 1.00 44.07 O
ATOM 9 C3' G B1219 18.327 99.494 98.602 1.00 43.83 C
ATOM 10 O3' G B1219 18.548 98.495 97.619 1.00 42.60 O
ATOM 11 C2' G B1219 19.546 100.399 98.785 1.00 45.20 C
ATOM 12 O2' G B1219 20.766 99.684 98.812 1.00 46.81 O
ATOM 13 C1' G B1219 19.429 101.289 97.550 1.00 44.26 C
ATOM 14 N9 G B1219 20.080 102.596 97.605 1.00 44.18 N
ATOM 15 C8 G B1219 19.822 103.619 98.483 1.00 44.97 C
ATOM 16 N7 G B1219 20.515 104.698 98.230 1.00 44.69 N
ATOM 17 C5 G B1219 21.290 104.361 97.128 1.00 44.61 C
ATOM 18 C6 G B1219 22.235 105.132 96.392 1.00 45.45 C
ATOM 19 O6 G B1219 22.571 106.310 96.562 1.00 48.25 O
ATOM 20 N1 G B1219 22.803 104.398 95.360 1.00 44.34 N
ATOM 21 C2 G B1219 22.498 103.099 95.057 1.00 45.31 C
ATOM 22 N2 G B1219 23.170 102.567 94.023 1.00 47.10 N
ATOM 23 N3 G B1219 21.606 102.373 95.719 1.00 44.92 N
ATOM 24 C4 G B1219 21.048 103.063 96.739 1.00 44.62 C
ATOM 25 P A B1220 17.566 97.231 97.551 1.00 42.72 P
ATOM 26 OP1 A B1220 17.542 96.690 96.155 1.00 40.58 O
ATOM 27 OP2 A B1220 16.299 97.657 98.202 1.00 39.14 O
ATOM 28 O5' A B1220 18.267 96.145 98.476 1.00 41.86 O
TER
ATOM 2 P A A1220 17.566 97.231 97.551 1.00 42.72 P
ATOM 3 OP1 A A1220 17.542 96.690 96.155 1.00 40.58 O
ATOM 4 OP2 A A1220 16.299 97.657 98.202 1.00 39.14 O
ATOM 5 O5' A A1220 18.267 96.145 98.476 1.00 41.86 O
ATOM 6 C5' A A1220 19.368 95.360 97.991 1.00 42.73 C
ATOM 7 C4' A A1220 19.787 94.368 99.047 1.00 43.91 C
ATOM 8 O4' A A1220 20.229 95.088 100.227 1.00 44.15 O
ATOM 9 C3' A A1220 18.684 93.419 99.495 1.00 41.80 C
ATOM 10 O3' A A1220 18.874 92.158 98.846 1.00 42.39 O
ATOM 11 C2' A A1220 18.907 93.302 101.000 1.00 41.14 C
ATOM 12 O2' A A1220 19.918 92.362 101.290 1.00 37.97 O
ATOM 13 C1' A A1220 19.472 94.684 101.340 1.00 41.94 C
ATOM 14 N9 A A1220 18.574 95.791 101.687 1.00 41.31 N
ATOM 15 C8 A A1220 18.752 97.088 101.281 1.00 40.10 C
ATOM 16 N7 A A1220 17.887 97.923 101.789 1.00 42.09 N
ATOM 17 C5 A A1220 17.064 97.123 102.564 1.00 40.26 C
ATOM 18 C6 A A1220 15.960 97.422 103.374 1.00 40.45 C
ATOM 19 N6 A A1220 15.468 98.652 103.532 1.00 40.00 N
ATOM 20 N1 A A1220 15.371 96.405 104.026 1.00 40.17 N
ATOM 21 C2 A A1220 15.864 95.174 103.861 1.00 40.27 C
ATOM 22 N3 A A1220 16.895 94.767 103.124 1.00 40.43 N
ATOM 23 C4 A A1220 17.462 95.803 102.495 1.00 39.81 C
ATOM 24 P C A1221 17.886 91.703 97.664 1.00 42.87 P
ATOM 25 OP1 C A1221 18.518 90.562 96.948 1.00 42.02 O
ATOM 26 OP2 C A1221 17.504 92.917 96.899 1.00 44.02 O
ATOM 27 O5' C A1221 16.620 91.150 98.454 1.00 41.65 O
TER
ATOM 1 O3' A B1218 17.635 102.727 102.302 1.00 42.84 O
ATOM 2 P G B1219 16.414 102.347 101.339 1.00 42.18 P
ATOM 3 OP1 G B1219 15.794 103.634 100.967 1.00 43.58 O
ATOM 4 OP2 G B1219 15.588 101.280 101.965 1.00 41.42 O
ATOM 5 O5' G B1219 17.130 101.726 100.064 1.00 41.70 O
ATOM 6 C5' G B1219 16.372 101.058 99.057 1.00 42.78 C
ATOM 7 C4' G B1219 17.293 100.451 98.039 1.00 43.27 C
ATOM 8 O4' G B1219 18.044 101.505 97.377 1.00 44.07 O
ATOM 9 C3' G B1219 18.327 99.494 98.602 1.00 43.83 C
ATOM 10 O3' G B1219 18.548 98.495 97.619 1.00 42.60 O
ATOM 11 C2' G B1219 19.546 100.399 98.785 1.00 45.20 C
ATOM 12 O2' G B1219 20.766 99.684 98.812 1.00 46.81 O
ATOM 13 C1' G B1219 19.429 101.289 97.550 1.00 44.26 C
ATOM 14 N9 G B1219 20.080 102.596 97.605 1.00 44.18 N
ATOM 15 C8 G B1219 19.822 103.619 98.483 1.00 44.97 C
ATOM 16 N7 G B1219 20.515 104.698 98.230 1.00 44.69 N
ATOM 17 C5 G B1219 21.290 104.361 97.128 1.00 44.61 C
ATOM 18 C6 G B1219 22.235 105.132 96.392 1.00 45.45 C
ATOM 19 O6 G B1219 22.571 106.310 96.562 1.00 48.25 O
ATOM 20 N1 G B1219 22.803 104.398 95.360 1.00 44.34 N
ATOM 21 C2 G B1219 22.498 103.099 95.057 1.00 45.31 C
ATOM 22 N2 G B1219 23.170 102.567 94.023 1.00 47.10 N
ATOM 23 N3 G B1219 21.606 102.373 95.719 1.00 44.92 N
ATOM 24 C4 G B1219 21.048 103.063 96.739 1.00 44.62 C
ATOM 25 P A B1220 17.566 97.231 97.551 1.00 42.72 P
ATOM 26 OP1 A B1220 17.542 96.690 96.155 1.00 40.58 O
ATOM 27 OP2 A B1220 16.299 97.657 98.202 1.00 39.14 O
ATOM 28 O5' A B1220 18.267 96.145 98.476 1.00 41.86 O
TER
Atoms:
OP1: (17.542,96.690,96.155)
OP2: (16.299,97.657,98.202)
C3': (18.684,93.419,99.495)
C1': (19.472,94.684,101.340)
C5': (19.368,95.360,97.991)
O4': (20.229,95.088,100.227)
C8: (18.752,97.088,101.281)
O2': (19.918,92.362,101.290)
C6: (15.960,97.422,103.374)
C5: (17.064,97.123,102.564)
C4: (17.462,95.803,102.495)
P: (17.566,97.231,97.551)
C4': (19.787,94.368,99.047)
C2': (18.907,93.302,101.000)
C2: (15.864,95.174,103.861)
N1: (15.371,96.405,104.026)
N3: (16.895,94.767,103.124)
N6: (15.468,98.652,103.532)
N7: (17.887,97.923,101.789)
N9: (18.574,95.791,101.687)
O5': (18.267,96.145,98.476)
O3': (18.874,92.158,98.846)
OP2: (16.299,97.657,98.202)
C3': (18.684,93.419,99.495)
C1': (19.472,94.684,101.340)
C5': (19.368,95.360,97.991)
O4': (20.229,95.088,100.227)
C8: (18.752,97.088,101.281)
O2': (19.918,92.362,101.290)
C6: (15.960,97.422,103.374)
C5: (17.064,97.123,102.564)
C4: (17.462,95.803,102.495)
P: (17.566,97.231,97.551)
C4': (19.787,94.368,99.047)
C2': (18.907,93.302,101.000)
C2: (15.864,95.174,103.861)
N1: (15.371,96.405,104.026)
N3: (16.895,94.767,103.124)
N6: (15.468,98.652,103.532)
N7: (17.887,97.923,101.789)
N9: (18.574,95.791,101.687)
O5': (18.267,96.145,98.476)
O3': (18.874,92.158,98.846)
OP1: (15.794,103.634,100.967)
OP2: (15.588,101.280,101.965)
C3': (18.327,99.494,98.602)
C1': (19.429,101.289,97.550)
C5': (16.372,101.058,99.057)
O6: (22.571,106.310,96.562)
O4': (18.044,101.505,97.377)
C8: (19.822,103.619,98.483)
C2: (22.498,103.099,95.057)
C6: (22.235,105.132,96.392)
C5: (21.290,104.361,97.128)
C4: (21.048,103.063,96.739)
P: (16.414,102.347,101.339)
C4': (17.293,100.451,98.039)
C2': (19.546,100.399,98.785)
O2': (20.766,99.684,98.812)
N1: (22.803,104.398,95.360)
N2: (23.170,102.567,94.023)
N3: (21.606,102.373,95.719)
N7: (20.515,104.698,98.230)
N9: (20.080,102.596,97.605)
O5': (17.130,101.726,100.064)
O3': (18.548,98.495,97.619)
OP2: (15.588,101.280,101.965)
C3': (18.327,99.494,98.602)
C1': (19.429,101.289,97.550)
C5': (16.372,101.058,99.057)
O6: (22.571,106.310,96.562)
O4': (18.044,101.505,97.377)
C8: (19.822,103.619,98.483)
C2: (22.498,103.099,95.057)
C6: (22.235,105.132,96.392)
C5: (21.290,104.361,97.128)
C4: (21.048,103.063,96.739)
P: (16.414,102.347,101.339)
C4': (17.293,100.451,98.039)
C2': (19.546,100.399,98.785)
O2': (20.766,99.684,98.812)
N1: (22.803,104.398,95.360)
N2: (23.170,102.567,94.023)
N3: (21.606,102.373,95.719)
N7: (20.515,104.698,98.230)
N9: (20.080,102.596,97.605)
O5': (17.130,101.726,100.064)
O3': (18.548,98.495,97.619)
Image (generated by PyMOL):