Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01220:01219
Extra
PDB:
ATOM 1 O3' G A1219 18.401 98.258 97.397 1.00 36.94 O
ATOM 2 P A A1220 17.457 96.984 97.212 1.00 37.15 P
ATOM 3 OP1 A A1220 17.557 96.521 95.799 1.00 35.09 O
ATOM 4 OP2 A A1220 16.139 97.356 97.777 1.00 35.29 O
ATOM 5 O5' A A1220 18.117 95.872 98.137 1.00 37.38 O
ATOM 6 C5' A A1220 19.276 95.130 97.702 1.00 39.44 C
ATOM 7 C4' A A1220 19.672 94.134 98.764 1.00 40.48 C
ATOM 8 O4' A A1220 20.084 94.849 99.952 1.00 42.90 O
ATOM 9 C3' A A1220 18.552 93.199 99.180 1.00 39.23 C
ATOM 10 O3' A A1220 18.762 91.952 98.523 1.00 39.60 O
ATOM 11 C2' A A1220 18.721 93.075 100.691 1.00 39.03 C
ATOM 12 O2' A A1220 19.696 92.115 101.018 1.00 38.16 O
ATOM 13 C1' A A1220 19.313 94.436 101.055 1.00 41.11 C
ATOM 14 N9 A A1220 18.443 95.555 101.432 1.00 42.02 N
ATOM 15 C8 A A1220 18.664 96.869 101.089 1.00 42.45 C
ATOM 16 N7 A A1220 17.789 97.701 101.588 1.00 43.33 N
ATOM 17 C5 A A1220 16.921 96.885 102.295 1.00 42.25 C
ATOM 18 C6 A A1220 15.783 97.171 103.055 1.00 42.47 C
ATOM 19 N6 A A1220 15.312 98.405 103.239 1.00 42.49 N
ATOM 20 N1 A A1220 15.140 96.138 103.630 1.00 42.87 N
ATOM 21 C2 A A1220 15.626 94.904 103.448 1.00 43.06 C
ATOM 22 N3 A A1220 16.692 94.508 102.759 1.00 42.16 N
ATOM 23 C4 A A1220 17.304 95.559 102.199 1.00 41.58 C
ATOM 24 P C A1221 17.753 91.468 97.375 1.00 40.35 P
ATOM 25 OP1 C A1221 18.373 90.323 96.662 1.00 37.80 O
ATOM 26 OP2 C A1221 17.323 92.658 96.605 1.00 40.74 O
ATOM 27 O5' C A1221 16.500 90.932 98.195 1.00 40.94 O
TER
ATOM 1 O3' A B1218 17.553 102.452 101.867 1.00 41.08 O
ATOM 2 P G B1219 16.262 102.137 100.971 1.00 42.07 P
ATOM 3 OP1 G B1219 15.564 103.430 100.759 1.00 42.28 O
ATOM 4 OP2 G B1219 15.525 100.992 101.588 1.00 40.49 O
ATOM 5 O5' G B1219 16.883 101.666 99.584 1.00 38.71 O
ATOM 6 C5' G B1219 16.123 100.871 98.662 1.00 38.15 C
ATOM 7 C4' G B1219 17.053 100.185 97.702 1.00 38.00 C
ATOM 8 O4' G B1219 17.842 101.197 97.021 1.00 40.57 O
ATOM 9 C3' G B1219 18.062 99.252 98.352 1.00 38.83 C
ATOM 10 O3' G B1219 18.401 98.258 97.397 1.00 36.94 O
ATOM 11 C2' G B1219 19.254 100.177 98.585 1.00 41.17 C
ATOM 12 O2' G B1219 20.482 99.484 98.707 1.00 42.23 O
ATOM 13 C1' G B1219 19.214 101.006 97.306 1.00 41.42 C
ATOM 14 N9 G B1219 19.868 102.312 97.336 1.00 41.79 N
ATOM 15 C8 G B1219 19.636 103.351 98.205 1.00 41.20 C
ATOM 16 N7 G B1219 20.342 104.416 97.930 1.00 41.49 N
ATOM 17 C5 G B1219 21.097 104.053 96.820 1.00 42.90 C
ATOM 18 C6 G B1219 22.046 104.801 96.054 1.00 43.66 C
ATOM 19 O6 G B1219 22.413 105.975 96.204 1.00 44.87 O
ATOM 20 N1 G B1219 22.577 104.044 95.017 1.00 42.86 N
ATOM 21 C2 G B1219 22.245 102.744 94.741 1.00 43.92 C
ATOM 22 N2 G B1219 22.875 102.189 93.698 1.00 45.38 N
ATOM 23 N3 G B1219 21.363 102.038 95.434 1.00 43.39 N
ATOM 24 C4 G B1219 20.830 102.752 96.453 1.00 42.98 C
ATOM 25 P A B1220 17.457 96.984 97.212 1.00 37.15 P
ATOM 26 OP1 A B1220 17.557 96.521 95.799 1.00 35.09 O
ATOM 27 OP2 A B1220 16.139 97.356 97.777 1.00 35.29 O
ATOM 28 O5' A B1220 18.117 95.872 98.137 1.00 37.38 O
TER
ATOM 2 P A A1220 17.457 96.984 97.212 1.00 37.15 P
ATOM 3 OP1 A A1220 17.557 96.521 95.799 1.00 35.09 O
ATOM 4 OP2 A A1220 16.139 97.356 97.777 1.00 35.29 O
ATOM 5 O5' A A1220 18.117 95.872 98.137 1.00 37.38 O
ATOM 6 C5' A A1220 19.276 95.130 97.702 1.00 39.44 C
ATOM 7 C4' A A1220 19.672 94.134 98.764 1.00 40.48 C
ATOM 8 O4' A A1220 20.084 94.849 99.952 1.00 42.90 O
ATOM 9 C3' A A1220 18.552 93.199 99.180 1.00 39.23 C
ATOM 10 O3' A A1220 18.762 91.952 98.523 1.00 39.60 O
ATOM 11 C2' A A1220 18.721 93.075 100.691 1.00 39.03 C
ATOM 12 O2' A A1220 19.696 92.115 101.018 1.00 38.16 O
ATOM 13 C1' A A1220 19.313 94.436 101.055 1.00 41.11 C
ATOM 14 N9 A A1220 18.443 95.555 101.432 1.00 42.02 N
ATOM 15 C8 A A1220 18.664 96.869 101.089 1.00 42.45 C
ATOM 16 N7 A A1220 17.789 97.701 101.588 1.00 43.33 N
ATOM 17 C5 A A1220 16.921 96.885 102.295 1.00 42.25 C
ATOM 18 C6 A A1220 15.783 97.171 103.055 1.00 42.47 C
ATOM 19 N6 A A1220 15.312 98.405 103.239 1.00 42.49 N
ATOM 20 N1 A A1220 15.140 96.138 103.630 1.00 42.87 N
ATOM 21 C2 A A1220 15.626 94.904 103.448 1.00 43.06 C
ATOM 22 N3 A A1220 16.692 94.508 102.759 1.00 42.16 N
ATOM 23 C4 A A1220 17.304 95.559 102.199 1.00 41.58 C
ATOM 24 P C A1221 17.753 91.468 97.375 1.00 40.35 P
ATOM 25 OP1 C A1221 18.373 90.323 96.662 1.00 37.80 O
ATOM 26 OP2 C A1221 17.323 92.658 96.605 1.00 40.74 O
ATOM 27 O5' C A1221 16.500 90.932 98.195 1.00 40.94 O
TER
ATOM 1 O3' A B1218 17.553 102.452 101.867 1.00 41.08 O
ATOM 2 P G B1219 16.262 102.137 100.971 1.00 42.07 P
ATOM 3 OP1 G B1219 15.564 103.430 100.759 1.00 42.28 O
ATOM 4 OP2 G B1219 15.525 100.992 101.588 1.00 40.49 O
ATOM 5 O5' G B1219 16.883 101.666 99.584 1.00 38.71 O
ATOM 6 C5' G B1219 16.123 100.871 98.662 1.00 38.15 C
ATOM 7 C4' G B1219 17.053 100.185 97.702 1.00 38.00 C
ATOM 8 O4' G B1219 17.842 101.197 97.021 1.00 40.57 O
ATOM 9 C3' G B1219 18.062 99.252 98.352 1.00 38.83 C
ATOM 10 O3' G B1219 18.401 98.258 97.397 1.00 36.94 O
ATOM 11 C2' G B1219 19.254 100.177 98.585 1.00 41.17 C
ATOM 12 O2' G B1219 20.482 99.484 98.707 1.00 42.23 O
ATOM 13 C1' G B1219 19.214 101.006 97.306 1.00 41.42 C
ATOM 14 N9 G B1219 19.868 102.312 97.336 1.00 41.79 N
ATOM 15 C8 G B1219 19.636 103.351 98.205 1.00 41.20 C
ATOM 16 N7 G B1219 20.342 104.416 97.930 1.00 41.49 N
ATOM 17 C5 G B1219 21.097 104.053 96.820 1.00 42.90 C
ATOM 18 C6 G B1219 22.046 104.801 96.054 1.00 43.66 C
ATOM 19 O6 G B1219 22.413 105.975 96.204 1.00 44.87 O
ATOM 20 N1 G B1219 22.577 104.044 95.017 1.00 42.86 N
ATOM 21 C2 G B1219 22.245 102.744 94.741 1.00 43.92 C
ATOM 22 N2 G B1219 22.875 102.189 93.698 1.00 45.38 N
ATOM 23 N3 G B1219 21.363 102.038 95.434 1.00 43.39 N
ATOM 24 C4 G B1219 20.830 102.752 96.453 1.00 42.98 C
ATOM 25 P A B1220 17.457 96.984 97.212 1.00 37.15 P
ATOM 26 OP1 A B1220 17.557 96.521 95.799 1.00 35.09 O
ATOM 27 OP2 A B1220 16.139 97.356 97.777 1.00 35.29 O
ATOM 28 O5' A B1220 18.117 95.872 98.137 1.00 37.38 O
TER
Atoms:
OP1: (17.557,96.521,95.799)
OP2: (16.139,97.356,97.777)
C3': (18.552,93.199,99.180)
C1': (19.313,94.436,101.055)
C5': (19.276,95.130,97.702)
O4': (20.084,94.849,99.952)
C8: (18.664,96.869,101.089)
O2': (19.696,92.115,101.018)
C6: (15.783,97.171,103.055)
C5: (16.921,96.885,102.295)
C4: (17.304,95.559,102.199)
P: (17.457,96.984,97.212)
C4': (19.672,94.134,98.764)
C2': (18.721,93.075,100.691)
C2: (15.626,94.904,103.448)
N1: (15.140,96.138,103.630)
N3: (16.692,94.508,102.759)
N6: (15.312,98.405,103.239)
N7: (17.789,97.701,101.588)
N9: (18.443,95.555,101.432)
O5': (18.117,95.872,98.137)
O3': (18.762,91.952,98.523)
OP2: (16.139,97.356,97.777)
C3': (18.552,93.199,99.180)
C1': (19.313,94.436,101.055)
C5': (19.276,95.130,97.702)
O4': (20.084,94.849,99.952)
C8: (18.664,96.869,101.089)
O2': (19.696,92.115,101.018)
C6: (15.783,97.171,103.055)
C5: (16.921,96.885,102.295)
C4: (17.304,95.559,102.199)
P: (17.457,96.984,97.212)
C4': (19.672,94.134,98.764)
C2': (18.721,93.075,100.691)
C2: (15.626,94.904,103.448)
N1: (15.140,96.138,103.630)
N3: (16.692,94.508,102.759)
N6: (15.312,98.405,103.239)
N7: (17.789,97.701,101.588)
N9: (18.443,95.555,101.432)
O5': (18.117,95.872,98.137)
O3': (18.762,91.952,98.523)
OP1: (15.564,103.430,100.759)
OP2: (15.525,100.992,101.588)
C3': (18.062,99.252,98.352)
C1': (19.214,101.006,97.306)
C5': (16.123,100.871,98.662)
O6: (22.413,105.975,96.204)
O4': (17.842,101.197,97.021)
C8: (19.636,103.351,98.205)
C2: (22.245,102.744,94.741)
C6: (22.046,104.801,96.054)
C5: (21.097,104.053,96.820)
C4: (20.830,102.752,96.453)
P: (16.262,102.137,100.971)
C4': (17.053,100.185,97.702)
C2': (19.254,100.177,98.585)
O2': (20.482,99.484,98.707)
N1: (22.577,104.044,95.017)
N2: (22.875,102.189,93.698)
N3: (21.363,102.038,95.434)
N7: (20.342,104.416,97.930)
N9: (19.868,102.312,97.336)
O5': (16.883,101.666,99.584)
O3': (18.401,98.258,97.397)
OP2: (15.525,100.992,101.588)
C3': (18.062,99.252,98.352)
C1': (19.214,101.006,97.306)
C5': (16.123,100.871,98.662)
O6: (22.413,105.975,96.204)
O4': (17.842,101.197,97.021)
C8: (19.636,103.351,98.205)
C2: (22.245,102.744,94.741)
C6: (22.046,104.801,96.054)
C5: (21.097,104.053,96.820)
C4: (20.830,102.752,96.453)
P: (16.262,102.137,100.971)
C4': (17.053,100.185,97.702)
C2': (19.254,100.177,98.585)
O2': (20.482,99.484,98.707)
N1: (22.577,104.044,95.017)
N2: (22.875,102.189,93.698)
N3: (21.363,102.038,95.434)
N7: (20.342,104.416,97.930)
N9: (19.868,102.312,97.336)
O5': (16.883,101.666,99.584)
O3': (18.401,98.258,97.397)
Image (generated by PyMOL):