ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01220:01219

Extra

PDB:
ATOM 1 O3' G A1219 18.172 98.154 97.330 1.00 30.50 O
ATOM 2 P A A1220 17.303 96.811 97.247 1.00 30.30 P
ATOM 3 OP1 A A1220 17.378 96.305 95.846 1.00 27.25 O
ATOM 4 OP2 A A1220 15.977 97.094 97.856 1.00 27.65 O
ATOM 5 O5' A A1220 18.080 95.789 98.186 1.00 27.66 O
ATOM 6 C5' A A1220 19.185 95.010 97.691 1.00 28.96 C
ATOM 7 C4' A A1220 19.604 94.005 98.732 1.00 30.79 C
ATOM 8 O4' A A1220 20.029 94.714 99.924 1.00 33.99 O
ATOM 9 C3' A A1220 18.497 93.056 99.165 1.00 30.97 C
ATOM 10 O3' A A1220 18.655 91.816 98.455 1.00 30.98 O
ATOM 11 C2' A A1220 18.737 92.908 100.669 1.00 30.99 C
ATOM 12 O2' A A1220 19.797 92.032 100.959 1.00 30.45 O
ATOM 13 C1' A A1220 19.279 94.286 101.035 1.00 32.17 C
ATOM 14 N9 A A1220 18.345 95.358 101.394 1.00 33.82 N
ATOM 15 C8 A A1220 18.491 96.680 101.053 1.00 34.31 C
ATOM 16 N7 A A1220 17.560 97.459 101.538 1.00 35.37 N
ATOM 17 C5 A A1220 16.733 96.596 102.237 1.00 33.55 C
ATOM 18 C6 A A1220 15.572 96.815 102.984 1.00 32.63 C
ATOM 19 N6 A A1220 15.031 98.014 103.171 1.00 33.13 N
ATOM 20 N1 A A1220 14.980 95.750 103.546 1.00 34.63 N
ATOM 21 C2 A A1220 15.538 94.545 103.375 1.00 37.14 C
ATOM 22 N3 A A1220 16.638 94.210 102.703 1.00 37.13 N
ATOM 23 C4 A A1220 17.196 95.295 102.147 1.00 34.61 C
ATOM 24 P C A1221 17.558 91.340 97.374 1.00 28.30 P
ATOM 25 OP1 C A1221 18.154 90.164 96.699 1.00 29.66 O
ATOM 26 OP2 C A1221 17.087 92.472 96.558 1.00 31.29 O
ATOM 27 O5' C A1221 16.330 90.857 98.256 1.00 29.59 O
TER

ATOM 1 O3' A B1218 17.190 102.325 101.975 1.00 33.90 O
ATOM 2 P G B1219 15.959 101.967 101.011 1.00 34.82 P
ATOM 3 OP1 G B1219 15.256 103.231 100.691 1.00 34.15 O
ATOM 4 OP2 G B1219 15.196 100.843 101.625 1.00 32.76 O
ATOM 5 O5' G B1219 16.673 101.451 99.684 1.00 33.85 O
ATOM 6 C5' G B1219 15.928 100.801 98.641 1.00 34.69 C
ATOM 7 C4' G B1219 16.873 100.126 97.678 1.00 34.75 C
ATOM 8 O4' G B1219 17.689 101.136 97.027 1.00 37.73 O
ATOM 9 C3' G B1219 17.856 99.143 98.304 1.00 34.37 C
ATOM 10 O3' G B1219 18.172 98.154 97.330 1.00 30.50 O
ATOM 11 C2' G B1219 19.076 100.025 98.556 1.00 36.90 C
ATOM 12 O2' G B1219 20.283 99.299 98.652 1.00 37.19 O
ATOM 13 C1' G B1219 19.057 100.890 97.298 1.00 39.11 C
ATOM 14 N9 G B1219 19.754 102.173 97.366 1.00 41.54 N
ATOM 15 C8 G B1219 19.573 103.186 98.279 1.00 42.46 C
ATOM 16 N7 G B1219 20.304 104.239 98.026 1.00 42.71 N
ATOM 17 C5 G B1219 21.017 103.896 96.885 1.00 43.31 C
ATOM 18 C6 G B1219 21.956 104.644 96.124 1.00 43.81 C
ATOM 19 O6 G B1219 22.342 105.803 96.299 1.00 45.55 O
ATOM 20 N1 G B1219 22.447 103.909 95.052 1.00 44.92 N
ATOM 21 C2 G B1219 22.074 102.626 94.738 1.00 46.02 C
ATOM 22 N2 G B1219 22.670 102.081 93.663 1.00 47.28 N
ATOM 23 N3 G B1219 21.187 101.925 95.425 1.00 44.63 N
ATOM 24 C4 G B1219 20.704 102.616 96.479 1.00 42.76 C
ATOM 25 P A B1220 17.303 96.811 97.247 1.00 30.30 P
ATOM 26 OP1 A B1220 17.378 96.305 95.846 1.00 27.25 O
ATOM 27 OP2 A B1220 15.977 97.094 97.856 1.00 27.65 O
ATOM 28 O5' A B1220 18.080 95.789 98.186 1.00 27.66 O
TER

Atoms:
OP1: (17.378,96.305,95.846)
OP2: (15.977,97.094,97.856)
C3': (18.497,93.056,99.165)
C1': (19.279,94.286,101.035)
C5': (19.185,95.010,97.691)
O4': (20.029,94.714,99.924)
C8: (18.491,96.680,101.053)
O2': (19.797,92.032,100.959)
C6: (15.572,96.815,102.984)
C5: (16.733,96.596,102.237)
C4: (17.196,95.295,102.147)
P: (17.303,96.811,97.247)
C4': (19.604,94.005,98.732)
C2': (18.737,92.908,100.669)
C2: (15.538,94.545,103.375)
N1: (14.980,95.750,103.546)
N3: (16.638,94.210,102.703)
N6: (15.031,98.014,103.171)
N7: (17.560,97.459,101.538)
N9: (18.345,95.358,101.394)
O5': (18.080,95.789,98.186)
O3': (18.655,91.816,98.455)
OP1: (15.256,103.231,100.691)
OP2: (15.196,100.843,101.625)
C3': (17.856,99.143,98.304)
C1': (19.057,100.890,97.298)
C5': (15.928,100.801,98.641)
O6: (22.342,105.803,96.299)
O4': (17.689,101.136,97.027)
C8: (19.573,103.186,98.279)
C2: (22.074,102.626,94.738)
C6: (21.956,104.644,96.124)
C5: (21.017,103.896,96.885)
C4: (20.704,102.616,96.479)
P: (15.959,101.967,101.011)
C4': (16.873,100.126,97.678)
C2': (19.076,100.025,98.556)
O2': (20.283,99.299,98.652)
N1: (22.447,103.909,95.052)
N2: (22.670,102.081,93.663)
N3: (21.187,101.925,95.425)
N7: (20.304,104.239,98.026)
N9: (19.754,102.173,97.366)
O5': (16.673,101.451,99.684)
O3': (18.172,98.154,97.330)
Image (generated by PyMOL):
PyMOL image
show in jmol