Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2491:A2455
Extra
PDB:
ATOM 1 O3' U A2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 2 P A A2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 3 OP1 A A2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 4 OP2 A A2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 5 O5' A A2491 -64.878 -73.626 -2.469 1.00 1.79 O
ATOM 6 C5' A A2491 -65.081 -74.262 -1.212 1.00 1.79 C
ATOM 7 C4' A A2491 -66.290 -75.145 -1.275 1.00 1.79 C
ATOM 8 O4' A A2491 -67.478 -74.321 -1.306 1.00 1.79 O
ATOM 9 C3' A A2491 -66.341 -76.068 -2.483 1.00 1.79 C
ATOM 10 O3' A A2491 -66.905 -77.332 -2.117 1.00 1.79 O
ATOM 11 C2' A A2491 -67.304 -75.341 -3.412 1.00 1.79 C
ATOM 12 O2' A A2491 -68.043 -76.239 -4.223 1.00 1.79 O
ATOM 13 C1' A A2491 -68.242 -74.636 -2.430 1.00 1.79 C
ATOM 14 N9 A A2491 -68.764 -73.392 -2.982 1.00 3.80 N
ATOM 15 C8 A A2491 -68.057 -72.377 -3.551 1.00 3.80 C
ATOM 16 N7 A A2491 -68.810 -71.423 -4.041 1.00 3.80 N
ATOM 17 C5 A A2491 -70.094 -71.838 -3.758 1.00 3.80 C
ATOM 18 C6 A A2491 -71.341 -71.283 -4.046 1.00 3.80 C
ATOM 19 N6 A A2491 -71.509 -70.169 -4.750 1.00 3.80 N
ATOM 20 N1 A A2491 -72.433 -71.923 -3.603 1.00 3.80 N
ATOM 21 C2 A A2491 -72.262 -73.064 -2.941 1.00 3.80 C
ATOM 22 N3 A A2491 -71.135 -73.705 -2.635 1.00 3.80 N
ATOM 23 C4 A A2491 -70.078 -73.029 -3.079 1.00 3.80 C
ATOM 24 P U A2492 -65.958 -78.634 -1.932 1.00 22.99 P
ATOM 25 OP1 U A2492 -64.528 -78.254 -1.765 1.00 18.44 O
ATOM 26 OP2 U A2492 -66.327 -79.606 -2.989 1.00 18.44 O
ATOM 27 O5' U A2492 -66.515 -79.189 -0.550 1.00 4.34 O
TER
ATOM 1 O3' A B2454 -70.011 -65.712 -4.156 1.00 0.79 O
ATOM 2 P G B2455 -69.838 -66.246 -5.638 1.00 16.50 P
ATOM 3 OP1 G B2455 -69.557 -67.693 -5.497 1.00 16.50 O
ATOM 4 OP2 G B2455 -68.865 -65.378 -6.336 1.00 16.50 O
ATOM 5 O5' G B2455 -71.286 -66.001 -6.260 1.00 5.35 O
ATOM 6 C5' G B2455 -71.868 -64.674 -6.236 1.00 5.35 C
ATOM 7 C4' G B2455 -71.381 -63.893 -7.425 1.00 5.35 C
ATOM 8 O4' G B2455 -72.276 -64.123 -8.538 1.00 5.35 O
ATOM 9 C3' G B2455 -71.325 -62.381 -7.352 1.00 5.35 C
ATOM 10 O3' G B2455 -70.167 -61.936 -6.649 1.00 5.35 O
ATOM 11 C2' G B2455 -71.244 -62.031 -8.832 1.00 5.35 C
ATOM 12 O2' G B2455 -69.954 -62.354 -9.334 1.00 5.35 O
ATOM 13 C1' G B2455 -72.212 -63.039 -9.437 1.00 5.35 C
ATOM 14 N9 G B2455 -73.555 -62.510 -9.613 1.00 0.79 N
ATOM 15 C8 G B2455 -74.721 -63.018 -9.102 1.00 0.79 C
ATOM 16 N7 G B2455 -75.766 -62.303 -9.403 1.00 0.79 N
ATOM 17 C5 G B2455 -75.257 -61.259 -10.161 1.00 0.79 C
ATOM 18 C6 G B2455 -75.910 -60.140 -10.754 1.00 0.79 C
ATOM 19 O6 G B2455 -77.104 -59.819 -10.693 1.00 0.79 O
ATOM 20 N1 G B2455 -75.021 -59.345 -11.457 1.00 0.79 N
ATOM 21 C2 G B2455 -73.681 -59.579 -11.561 1.00 0.79 C
ATOM 22 N2 G B2455 -72.993 -58.700 -12.281 1.00 0.79 N
ATOM 23 N3 G B2455 -73.054 -60.599 -10.998 1.00 0.79 N
ATOM 24 C4 G B2455 -73.898 -61.390 -10.318 1.00 0.79 C
ATOM 25 P C B2456 -70.267 -60.660 -5.663 1.00 0.79 P
ATOM 26 OP1 C B2456 -69.145 -60.783 -4.703 1.00 0.79 O
ATOM 27 OP2 C B2456 -71.650 -60.481 -5.165 1.00 0.79 O
ATOM 28 O5' C B2456 -69.973 -59.434 -6.616 1.00 0.79 O
TER
ATOM 2 P A A2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 3 OP1 A A2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 4 OP2 A A2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 5 O5' A A2491 -64.878 -73.626 -2.469 1.00 1.79 O
ATOM 6 C5' A A2491 -65.081 -74.262 -1.212 1.00 1.79 C
ATOM 7 C4' A A2491 -66.290 -75.145 -1.275 1.00 1.79 C
ATOM 8 O4' A A2491 -67.478 -74.321 -1.306 1.00 1.79 O
ATOM 9 C3' A A2491 -66.341 -76.068 -2.483 1.00 1.79 C
ATOM 10 O3' A A2491 -66.905 -77.332 -2.117 1.00 1.79 O
ATOM 11 C2' A A2491 -67.304 -75.341 -3.412 1.00 1.79 C
ATOM 12 O2' A A2491 -68.043 -76.239 -4.223 1.00 1.79 O
ATOM 13 C1' A A2491 -68.242 -74.636 -2.430 1.00 1.79 C
ATOM 14 N9 A A2491 -68.764 -73.392 -2.982 1.00 3.80 N
ATOM 15 C8 A A2491 -68.057 -72.377 -3.551 1.00 3.80 C
ATOM 16 N7 A A2491 -68.810 -71.423 -4.041 1.00 3.80 N
ATOM 17 C5 A A2491 -70.094 -71.838 -3.758 1.00 3.80 C
ATOM 18 C6 A A2491 -71.341 -71.283 -4.046 1.00 3.80 C
ATOM 19 N6 A A2491 -71.509 -70.169 -4.750 1.00 3.80 N
ATOM 20 N1 A A2491 -72.433 -71.923 -3.603 1.00 3.80 N
ATOM 21 C2 A A2491 -72.262 -73.064 -2.941 1.00 3.80 C
ATOM 22 N3 A A2491 -71.135 -73.705 -2.635 1.00 3.80 N
ATOM 23 C4 A A2491 -70.078 -73.029 -3.079 1.00 3.80 C
ATOM 24 P U A2492 -65.958 -78.634 -1.932 1.00 22.99 P
ATOM 25 OP1 U A2492 -64.528 -78.254 -1.765 1.00 18.44 O
ATOM 26 OP2 U A2492 -66.327 -79.606 -2.989 1.00 18.44 O
ATOM 27 O5' U A2492 -66.515 -79.189 -0.550 1.00 4.34 O
TER
ATOM 1 O3' A B2454 -70.011 -65.712 -4.156 1.00 0.79 O
ATOM 2 P G B2455 -69.838 -66.246 -5.638 1.00 16.50 P
ATOM 3 OP1 G B2455 -69.557 -67.693 -5.497 1.00 16.50 O
ATOM 4 OP2 G B2455 -68.865 -65.378 -6.336 1.00 16.50 O
ATOM 5 O5' G B2455 -71.286 -66.001 -6.260 1.00 5.35 O
ATOM 6 C5' G B2455 -71.868 -64.674 -6.236 1.00 5.35 C
ATOM 7 C4' G B2455 -71.381 -63.893 -7.425 1.00 5.35 C
ATOM 8 O4' G B2455 -72.276 -64.123 -8.538 1.00 5.35 O
ATOM 9 C3' G B2455 -71.325 -62.381 -7.352 1.00 5.35 C
ATOM 10 O3' G B2455 -70.167 -61.936 -6.649 1.00 5.35 O
ATOM 11 C2' G B2455 -71.244 -62.031 -8.832 1.00 5.35 C
ATOM 12 O2' G B2455 -69.954 -62.354 -9.334 1.00 5.35 O
ATOM 13 C1' G B2455 -72.212 -63.039 -9.437 1.00 5.35 C
ATOM 14 N9 G B2455 -73.555 -62.510 -9.613 1.00 0.79 N
ATOM 15 C8 G B2455 -74.721 -63.018 -9.102 1.00 0.79 C
ATOM 16 N7 G B2455 -75.766 -62.303 -9.403 1.00 0.79 N
ATOM 17 C5 G B2455 -75.257 -61.259 -10.161 1.00 0.79 C
ATOM 18 C6 G B2455 -75.910 -60.140 -10.754 1.00 0.79 C
ATOM 19 O6 G B2455 -77.104 -59.819 -10.693 1.00 0.79 O
ATOM 20 N1 G B2455 -75.021 -59.345 -11.457 1.00 0.79 N
ATOM 21 C2 G B2455 -73.681 -59.579 -11.561 1.00 0.79 C
ATOM 22 N2 G B2455 -72.993 -58.700 -12.281 1.00 0.79 N
ATOM 23 N3 G B2455 -73.054 -60.599 -10.998 1.00 0.79 N
ATOM 24 C4 G B2455 -73.898 -61.390 -10.318 1.00 0.79 C
ATOM 25 P C B2456 -70.267 -60.660 -5.663 1.00 0.79 P
ATOM 26 OP1 C B2456 -69.145 -60.783 -4.703 1.00 0.79 O
ATOM 27 OP2 C B2456 -71.650 -60.481 -5.165 1.00 0.79 O
ATOM 28 O5' C B2456 -69.973 -59.434 -6.616 1.00 0.79 O
TER
Atoms:
OP1: (-62.726,-74.479,-3.411)
OP2: (-63.491,-72.061,-3.824)
C3': (-66.341,-76.068,-2.483)
C1': (-68.242,-74.636,-2.430)
C5': (-65.081,-74.262,-1.212)
O4': (-67.478,-74.321,-1.306)
C8: (-68.057,-72.377,-3.551)
O2': (-68.043,-76.239,-4.223)
C6: (-71.341,-71.283,-4.046)
C5: (-70.094,-71.838,-3.758)
C4: (-70.078,-73.029,-3.079)
P: (-63.408,-73.255,-2.938)
C4': (-66.290,-75.145,-1.275)
C2': (-67.304,-75.341,-3.412)
C2: (-72.262,-73.064,-2.941)
N1: (-72.433,-71.923,-3.603)
N3: (-71.135,-73.705,-2.635)
N6: (-71.509,-70.169,-4.750)
N7: (-68.810,-71.423,-4.041)
N9: (-68.764,-73.392,-2.982)
O5': (-64.878,-73.626,-2.469)
O3': (-66.905,-77.332,-2.117)
OP2: (-63.491,-72.061,-3.824)
C3': (-66.341,-76.068,-2.483)
C1': (-68.242,-74.636,-2.430)
C5': (-65.081,-74.262,-1.212)
O4': (-67.478,-74.321,-1.306)
C8: (-68.057,-72.377,-3.551)
O2': (-68.043,-76.239,-4.223)
C6: (-71.341,-71.283,-4.046)
C5: (-70.094,-71.838,-3.758)
C4: (-70.078,-73.029,-3.079)
P: (-63.408,-73.255,-2.938)
C4': (-66.290,-75.145,-1.275)
C2': (-67.304,-75.341,-3.412)
C2: (-72.262,-73.064,-2.941)
N1: (-72.433,-71.923,-3.603)
N3: (-71.135,-73.705,-2.635)
N6: (-71.509,-70.169,-4.750)
N7: (-68.810,-71.423,-4.041)
N9: (-68.764,-73.392,-2.982)
O5': (-64.878,-73.626,-2.469)
O3': (-66.905,-77.332,-2.117)
OP1: (-69.557,-67.693,-5.497)
OP2: (-68.865,-65.378,-6.336)
C3': (-71.325,-62.381,-7.352)
C1': (-72.212,-63.039,-9.437)
C5': (-71.868,-64.674,-6.236)
O6: (-77.104,-59.819,-10.693)
O4': (-72.276,-64.123,-8.538)
C8: (-74.721,-63.018,-9.102)
C2: (-73.681,-59.579,-11.561)
C6: (-75.910,-60.140,-10.754)
C5: (-75.257,-61.259,-10.161)
C4: (-73.898,-61.390,-10.318)
P: (-69.838,-66.246,-5.638)
C4': (-71.381,-63.893,-7.425)
C2': (-71.244,-62.031,-8.832)
O2': (-69.954,-62.354,-9.334)
N1: (-75.021,-59.345,-11.457)
N2: (-72.993,-58.700,-12.281)
N3: (-73.054,-60.599,-10.998)
N7: (-75.766,-62.303,-9.403)
N9: (-73.555,-62.510,-9.613)
O5': (-71.286,-66.001,-6.260)
O3': (-70.167,-61.936,-6.649)
OP2: (-68.865,-65.378,-6.336)
C3': (-71.325,-62.381,-7.352)
C1': (-72.212,-63.039,-9.437)
C5': (-71.868,-64.674,-6.236)
O6: (-77.104,-59.819,-10.693)
O4': (-72.276,-64.123,-8.538)
C8: (-74.721,-63.018,-9.102)
C2: (-73.681,-59.579,-11.561)
C6: (-75.910,-60.140,-10.754)
C5: (-75.257,-61.259,-10.161)
C4: (-73.898,-61.390,-10.318)
P: (-69.838,-66.246,-5.638)
C4': (-71.381,-63.893,-7.425)
C2': (-71.244,-62.031,-8.832)
O2': (-69.954,-62.354,-9.334)
N1: (-75.021,-59.345,-11.457)
N2: (-72.993,-58.700,-12.281)
N3: (-73.054,-60.599,-10.998)
N7: (-75.766,-62.303,-9.403)
N9: (-73.555,-62.510,-9.613)
O5': (-71.286,-66.001,-6.260)
O3': (-70.167,-61.936,-6.649)
Image (generated by PyMOL):