ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A315:A95

Extra

PDB:
ATOM 1 O3' G A 314 111.468 52.881 -5.812 1.00 64.65 O
ATOM 2 P A A 315 110.220 53.456 -6.654 1.00 65.54 P
ATOM 3 OP1 A A 315 110.177 52.723 -7.965 1.00 64.37 O
ATOM 4 OP2 A A 315 109.040 53.454 -5.743 1.00 63.89 O
ATOM 5 O5' A A 315 110.611 54.973 -6.959 1.00 64.44 O
ATOM 6 C5' A A 315 109.849 55.751 -7.897 1.00 61.96 C
ATOM 7 C4' A A 315 110.340 57.177 -7.921 1.00 61.11 C
ATOM 8 O4' A A 315 110.032 57.830 -6.665 1.00 59.63 O
ATOM 9 C3' A A 315 111.834 57.381 -8.090 1.00 61.49 C
ATOM 10 O3' A A 315 112.231 57.310 -9.439 1.00 61.22 O
ATOM 11 C2' A A 315 112.044 58.773 -7.509 1.00 61.48 C
ATOM 12 O2' A A 315 111.722 59.792 -8.440 1.00 63.24 O
ATOM 13 C1' A A 315 111.018 58.797 -6.378 1.00 59.91 C
ATOM 14 N9 A A 315 111.577 58.508 -5.063 1.00 59.34 N
ATOM 15 C8 A A 315 111.494 57.348 -4.347 1.00 60.08 C
ATOM 16 N7 A A 315 112.054 57.415 -3.165 1.00 61.96 N
ATOM 17 C5 A A 315 112.554 58.705 -3.107 1.00 62.17 C
ATOM 18 C6 A A 315 113.251 59.408 -2.103 1.00 64.51 C
ATOM 19 N6 A A 315 113.576 58.887 -0.916 1.00 64.81 N
ATOM 20 N1 A A 315 113.604 60.686 -2.363 1.00 64.58 N
ATOM 21 C2 A A 315 113.270 61.208 -3.549 1.00 64.51 C
ATOM 22 N3 A A 315 112.614 60.649 -4.567 1.00 62.12 N
ATOM 23 C4 A A 315 112.280 59.384 -4.275 1.00 60.97 C
ATOM 24 P G A 316 113.576 56.520 -9.825 1.00 61.95 P
ATOM 25 OP1 G A 316 113.644 56.574 -11.308 1.00 64.82 O
ATOM 26 OP2 G A 316 113.554 55.198 -9.158 1.00 64.83 O
ATOM 27 O5' G A 316 114.746 57.412 -9.215 1.00 61.12 O
TER

ATOM 1 O3' C B 94 110.957 55.385 2.278 1.00 61.02 O
ATOM 2 P G B 95 112.291 55.610 1.396 1.00 60.75 P
ATOM 3 OP1 G B 95 112.064 56.962 0.798 1.00 62.54 O
ATOM 4 OP2 G B 95 112.561 54.457 0.499 1.00 60.75 O
ATOM 5 O5' G B 95 113.438 55.719 2.482 1.00 57.97 O
ATOM 6 C5' G B 95 113.404 56.787 3.435 1.00 56.66 C
ATOM 7 C4' G B 95 114.562 56.697 4.384 1.00 56.64 C
ATOM 8 O4' G B 95 114.393 55.563 5.275 1.00 58.21 O
ATOM 9 C3' G B 95 115.939 56.469 3.797 1.00 57.37 C
ATOM 10 O3' G B 95 116.536 57.599 3.234 1.00 59.02 O
ATOM 11 C2' G B 95 116.699 55.980 5.015 1.00 57.44 C
ATOM 12 O2' G B 95 117.001 57.054 5.891 1.00 57.22 O
ATOM 13 C1' G B 95 115.668 55.050 5.647 1.00 56.86 C
ATOM 14 N9 G B 95 115.821 53.706 5.080 1.00 55.95 N
ATOM 15 C8 G B 95 115.024 53.115 4.130 1.00 56.67 C
ATOM 16 N7 G B 95 115.457 51.941 3.753 1.00 56.66 N
ATOM 17 C5 G B 95 116.596 51.731 4.514 1.00 55.19 C
ATOM 18 C6 G B 95 117.495 50.635 4.528 1.00 55.93 C
ATOM 19 O6 G B 95 117.447 49.591 3.858 1.00 57.04 O
ATOM 20 N1 G B 95 118.531 50.835 5.436 1.00 54.02 N
ATOM 21 C2 G B 95 118.671 51.944 6.238 1.00 55.23 C
ATOM 22 N2 G B 95 119.739 51.959 7.053 1.00 57.35 N
ATOM 23 N3 G B 95 117.831 52.966 6.241 1.00 53.83 N
ATOM 24 C4 G B 95 116.828 52.799 5.354 1.00 54.98 C
ATOM 25 P G B 96 117.436 57.427 1.915 1.00 58.60 P
ATOM 26 OP1 G B 96 117.936 58.781 1.578 1.00 59.09 O
ATOM 27 OP2 G B 96 116.654 56.642 0.929 1.00 58.80 O
ATOM 28 O5' G B 96 118.659 56.546 2.396 1.00 59.05 O
TER

Atoms:
OP1: (110.177,52.723,-7.965)
OP2: (109.040,53.454,-5.743)
C3': (111.834,57.381,-8.090)
C1': (111.018,58.797,-6.378)
C5': (109.849,55.751,-7.897)
O4': (110.032,57.830,-6.665)
C8: (111.494,57.348,-4.347)
O2': (111.722,59.792,-8.440)
C6: (113.251,59.408,-2.103)
C5: (112.554,58.705,-3.107)
C4: (112.280,59.384,-4.275)
P: (110.220,53.456,-6.654)
C4': (110.340,57.177,-7.921)
C2': (112.044,58.773,-7.509)
C2: (113.270,61.208,-3.549)
N1: (113.604,60.686,-2.363)
N3: (112.614,60.649,-4.567)
N6: (113.576,58.887,-0.916)
N7: (112.054,57.415,-3.165)
N9: (111.577,58.508,-5.063)
O5': (110.611,54.973,-6.959)
O3': (112.231,57.310,-9.439)
OP1: (112.064,56.962,0.798)
OP2: (112.561,54.457,0.499)
C3': (115.939,56.469,3.797)
C1': (115.668,55.050,5.647)
C5': (113.404,56.787,3.435)
O6: (117.447,49.591,3.858)
O4': (114.393,55.563,5.275)
C8: (115.024,53.115,4.130)
C2: (118.671,51.944,6.238)
C6: (117.495,50.635,4.528)
C5: (116.596,51.731,4.514)
C4: (116.828,52.799,5.354)
P: (112.291,55.610,1.396)
C4': (114.562,56.697,4.384)
C2': (116.699,55.980,5.015)
O2': (117.001,57.054,5.891)
N1: (118.531,50.835,5.436)
N2: (119.739,51.959,7.053)
N3: (117.831,52.966,6.241)
N7: (115.457,51.941,3.753)
N9: (115.821,53.706,5.080)
O5': (113.438,55.719,2.482)
O3': (116.536,57.599,3.234)
Image (generated by PyMOL):
PyMOL image
show in jmol