Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2598:A2562
Extra
PDB:
ATOM 1 O3' U A2597 -64.677 -72.873 -3.172 1.00 49.64 O
ATOM 2 P A A2598 -65.543 -73.310 -4.443 1.00 42.35 P
ATOM 3 OP1 A A2598 -65.040 -74.587 -5.008 1.00 38.88 O
ATOM 4 OP2 A A2598 -65.652 -72.115 -5.313 1.00 48.46 O
ATOM 5 O5' A A2598 -66.950 -73.582 -3.732 1.00 43.78 O
ATOM 6 C5' A A2598 -66.991 -74.320 -2.527 1.00 39.48 C
ATOM 7 C4' A A2598 -68.218 -75.187 -2.597 1.00 36.93 C
ATOM 8 O4' A A2598 -69.356 -74.307 -2.718 1.00 40.74 O
ATOM 9 C3' A A2598 -68.249 -76.098 -3.816 1.00 40.48 C
ATOM 10 O3' A A2598 -68.760 -77.373 -3.445 1.00 37.92 O
ATOM 11 C2' A A2598 -69.159 -75.365 -4.797 1.00 44.18 C
ATOM 12 O2' A A2598 -69.871 -76.258 -5.631 1.00 54.59 O
ATOM 13 C1' A A2598 -70.120 -74.671 -3.846 1.00 48.82 C
ATOM 14 N9 A A2598 -70.700 -73.461 -4.401 1.00 55.72 N
ATOM 15 C8 A A2598 -70.030 -72.446 -5.009 1.00 62.89 C
ATOM 16 N7 A A2598 -70.807 -71.469 -5.413 1.00 71.25 N
ATOM 17 C5 A A2598 -72.075 -71.877 -5.037 1.00 65.98 C
ATOM 18 C6 A A2598 -73.348 -71.281 -5.188 1.00 71.37 C
ATOM 19 N6 A A2598 -73.533 -70.096 -5.779 1.00 74.89 N
ATOM 20 N1 A A2598 -74.422 -71.952 -4.708 1.00 68.26 N
ATOM 21 C2 A A2598 -74.207 -73.139 -4.116 1.00 65.49 C
ATOM 22 N3 A A2598 -73.061 -73.799 -3.919 1.00 55.97 N
ATOM 23 C4 A A2598 -72.025 -73.106 -4.409 1.00 61.39 C
ATOM 24 P U A2599 -67.828 -78.673 -3.348 1.00 50.31 P
ATOM 25 OP1 U A2599 -66.413 -78.331 -3.029 1.00 55.55 O
ATOM 26 OP2 U A2599 -68.122 -79.531 -4.534 1.00 51.29 O
ATOM 27 O5' U A2599 -68.517 -79.318 -2.065 1.00 41.83 O
TER
ATOM 1 O3' A B2561 -72.071 -65.853 -5.365 1.00 49.81 O
ATOM 2 P G B2562 -71.995 -66.276 -6.891 1.00 35.68 P
ATOM 3 OP1 G B2562 -71.721 -67.728 -6.960 1.00 52.79 O
ATOM 4 OP2 G B2562 -71.079 -65.333 -7.586 1.00 35.70 O
ATOM 5 O5' G B2562 -73.512 -65.997 -7.333 1.00 48.84 O
ATOM 6 C5' G B2562 -74.016 -64.653 -7.370 1.00 42.68 C
ATOM 7 C4' G B2562 -73.349 -63.883 -8.497 1.00 37.75 C
ATOM 8 O4' G B2562 -74.000 -64.141 -9.773 1.00 40.26 O
ATOM 9 C3' G B2562 -73.402 -62.390 -8.313 1.00 37.18 C
ATOM 10 O3' G B2562 -72.317 -62.015 -7.503 1.00 45.32 O
ATOM 11 C2' G B2562 -73.222 -61.912 -9.745 1.00 35.86 C
ATOM 12 O2' G B2562 -71.862 -61.866 -10.113 1.00 47.70 O
ATOM 13 C1' G B2562 -73.991 -62.963 -10.554 1.00 41.49 C
ATOM 14 N9 G B2562 -75.370 -62.526 -10.769 1.00 44.43 N
ATOM 15 C8 G B2562 -76.526 -63.096 -10.299 1.00 39.85 C
ATOM 16 N7 G B2562 -77.601 -62.448 -10.641 1.00 39.80 N
ATOM 17 C5 G B2562 -77.131 -61.376 -11.380 1.00 44.68 C
ATOM 18 C6 G B2562 -77.830 -60.323 -12.018 1.00 50.65 C
ATOM 19 O6 G B2562 -79.049 -60.100 -12.074 1.00 53.83 O
ATOM 20 N1 G B2562 -76.956 -59.452 -12.653 1.00 50.28 N
ATOM 21 C2 G B2562 -75.588 -59.580 -12.666 1.00 53.11 C
ATOM 22 N2 G B2562 -74.901 -58.637 -13.330 1.00 66.92 N
ATOM 23 N3 G B2562 -74.929 -60.560 -12.077 1.00 48.42 N
ATOM 24 C4 G B2562 -75.764 -61.412 -11.459 1.00 44.85 C
ATOM 25 P C B2563 -72.459 -60.646 -6.697 1.00 41.83 P
ATOM 26 OP1 C B2563 -71.433 -60.579 -5.627 1.00 41.93 O
ATOM 27 OP2 C B2563 -73.894 -60.504 -6.338 1.00 50.28 O
ATOM 28 O5' C B2563 -72.142 -59.549 -7.825 1.00 35.56 O
TER
ATOM 2 P A A2598 -65.543 -73.310 -4.443 1.00 42.35 P
ATOM 3 OP1 A A2598 -65.040 -74.587 -5.008 1.00 38.88 O
ATOM 4 OP2 A A2598 -65.652 -72.115 -5.313 1.00 48.46 O
ATOM 5 O5' A A2598 -66.950 -73.582 -3.732 1.00 43.78 O
ATOM 6 C5' A A2598 -66.991 -74.320 -2.527 1.00 39.48 C
ATOM 7 C4' A A2598 -68.218 -75.187 -2.597 1.00 36.93 C
ATOM 8 O4' A A2598 -69.356 -74.307 -2.718 1.00 40.74 O
ATOM 9 C3' A A2598 -68.249 -76.098 -3.816 1.00 40.48 C
ATOM 10 O3' A A2598 -68.760 -77.373 -3.445 1.00 37.92 O
ATOM 11 C2' A A2598 -69.159 -75.365 -4.797 1.00 44.18 C
ATOM 12 O2' A A2598 -69.871 -76.258 -5.631 1.00 54.59 O
ATOM 13 C1' A A2598 -70.120 -74.671 -3.846 1.00 48.82 C
ATOM 14 N9 A A2598 -70.700 -73.461 -4.401 1.00 55.72 N
ATOM 15 C8 A A2598 -70.030 -72.446 -5.009 1.00 62.89 C
ATOM 16 N7 A A2598 -70.807 -71.469 -5.413 1.00 71.25 N
ATOM 17 C5 A A2598 -72.075 -71.877 -5.037 1.00 65.98 C
ATOM 18 C6 A A2598 -73.348 -71.281 -5.188 1.00 71.37 C
ATOM 19 N6 A A2598 -73.533 -70.096 -5.779 1.00 74.89 N
ATOM 20 N1 A A2598 -74.422 -71.952 -4.708 1.00 68.26 N
ATOM 21 C2 A A2598 -74.207 -73.139 -4.116 1.00 65.49 C
ATOM 22 N3 A A2598 -73.061 -73.799 -3.919 1.00 55.97 N
ATOM 23 C4 A A2598 -72.025 -73.106 -4.409 1.00 61.39 C
ATOM 24 P U A2599 -67.828 -78.673 -3.348 1.00 50.31 P
ATOM 25 OP1 U A2599 -66.413 -78.331 -3.029 1.00 55.55 O
ATOM 26 OP2 U A2599 -68.122 -79.531 -4.534 1.00 51.29 O
ATOM 27 O5' U A2599 -68.517 -79.318 -2.065 1.00 41.83 O
TER
ATOM 1 O3' A B2561 -72.071 -65.853 -5.365 1.00 49.81 O
ATOM 2 P G B2562 -71.995 -66.276 -6.891 1.00 35.68 P
ATOM 3 OP1 G B2562 -71.721 -67.728 -6.960 1.00 52.79 O
ATOM 4 OP2 G B2562 -71.079 -65.333 -7.586 1.00 35.70 O
ATOM 5 O5' G B2562 -73.512 -65.997 -7.333 1.00 48.84 O
ATOM 6 C5' G B2562 -74.016 -64.653 -7.370 1.00 42.68 C
ATOM 7 C4' G B2562 -73.349 -63.883 -8.497 1.00 37.75 C
ATOM 8 O4' G B2562 -74.000 -64.141 -9.773 1.00 40.26 O
ATOM 9 C3' G B2562 -73.402 -62.390 -8.313 1.00 37.18 C
ATOM 10 O3' G B2562 -72.317 -62.015 -7.503 1.00 45.32 O
ATOM 11 C2' G B2562 -73.222 -61.912 -9.745 1.00 35.86 C
ATOM 12 O2' G B2562 -71.862 -61.866 -10.113 1.00 47.70 O
ATOM 13 C1' G B2562 -73.991 -62.963 -10.554 1.00 41.49 C
ATOM 14 N9 G B2562 -75.370 -62.526 -10.769 1.00 44.43 N
ATOM 15 C8 G B2562 -76.526 -63.096 -10.299 1.00 39.85 C
ATOM 16 N7 G B2562 -77.601 -62.448 -10.641 1.00 39.80 N
ATOM 17 C5 G B2562 -77.131 -61.376 -11.380 1.00 44.68 C
ATOM 18 C6 G B2562 -77.830 -60.323 -12.018 1.00 50.65 C
ATOM 19 O6 G B2562 -79.049 -60.100 -12.074 1.00 53.83 O
ATOM 20 N1 G B2562 -76.956 -59.452 -12.653 1.00 50.28 N
ATOM 21 C2 G B2562 -75.588 -59.580 -12.666 1.00 53.11 C
ATOM 22 N2 G B2562 -74.901 -58.637 -13.330 1.00 66.92 N
ATOM 23 N3 G B2562 -74.929 -60.560 -12.077 1.00 48.42 N
ATOM 24 C4 G B2562 -75.764 -61.412 -11.459 1.00 44.85 C
ATOM 25 P C B2563 -72.459 -60.646 -6.697 1.00 41.83 P
ATOM 26 OP1 C B2563 -71.433 -60.579 -5.627 1.00 41.93 O
ATOM 27 OP2 C B2563 -73.894 -60.504 -6.338 1.00 50.28 O
ATOM 28 O5' C B2563 -72.142 -59.549 -7.825 1.00 35.56 O
TER
Atoms:
OP1: (-65.040,-74.587,-5.008)
OP2: (-65.652,-72.115,-5.313)
C3': (-68.249,-76.098,-3.816)
C1': (-70.120,-74.671,-3.846)
C5': (-66.991,-74.320,-2.527)
O4': (-69.356,-74.307,-2.718)
C8: (-70.030,-72.446,-5.009)
O2': (-69.871,-76.258,-5.631)
C6: (-73.348,-71.281,-5.188)
C5: (-72.075,-71.877,-5.037)
C4: (-72.025,-73.106,-4.409)
P: (-65.543,-73.310,-4.443)
C4': (-68.218,-75.187,-2.597)
C2': (-69.159,-75.365,-4.797)
C2: (-74.207,-73.139,-4.116)
N1: (-74.422,-71.952,-4.708)
N3: (-73.061,-73.799,-3.919)
N6: (-73.533,-70.096,-5.779)
N7: (-70.807,-71.469,-5.413)
N9: (-70.700,-73.461,-4.401)
O5': (-66.950,-73.582,-3.732)
O3': (-68.760,-77.373,-3.445)
OP2: (-65.652,-72.115,-5.313)
C3': (-68.249,-76.098,-3.816)
C1': (-70.120,-74.671,-3.846)
C5': (-66.991,-74.320,-2.527)
O4': (-69.356,-74.307,-2.718)
C8: (-70.030,-72.446,-5.009)
O2': (-69.871,-76.258,-5.631)
C6: (-73.348,-71.281,-5.188)
C5: (-72.075,-71.877,-5.037)
C4: (-72.025,-73.106,-4.409)
P: (-65.543,-73.310,-4.443)
C4': (-68.218,-75.187,-2.597)
C2': (-69.159,-75.365,-4.797)
C2: (-74.207,-73.139,-4.116)
N1: (-74.422,-71.952,-4.708)
N3: (-73.061,-73.799,-3.919)
N6: (-73.533,-70.096,-5.779)
N7: (-70.807,-71.469,-5.413)
N9: (-70.700,-73.461,-4.401)
O5': (-66.950,-73.582,-3.732)
O3': (-68.760,-77.373,-3.445)
OP1: (-71.721,-67.728,-6.960)
OP2: (-71.079,-65.333,-7.586)
C3': (-73.402,-62.390,-8.313)
C1': (-73.991,-62.963,-10.554)
C5': (-74.016,-64.653,-7.370)
O6: (-79.049,-60.100,-12.074)
O4': (-74.000,-64.141,-9.773)
C8: (-76.526,-63.096,-10.299)
C2: (-75.588,-59.580,-12.666)
C6: (-77.830,-60.323,-12.018)
C5: (-77.131,-61.376,-11.380)
C4: (-75.764,-61.412,-11.459)
P: (-71.995,-66.276,-6.891)
C4': (-73.349,-63.883,-8.497)
C2': (-73.222,-61.912,-9.745)
O2': (-71.862,-61.866,-10.113)
N1: (-76.956,-59.452,-12.653)
N2: (-74.901,-58.637,-13.330)
N3: (-74.929,-60.560,-12.077)
N7: (-77.601,-62.448,-10.641)
N9: (-75.370,-62.526,-10.769)
O5': (-73.512,-65.997,-7.333)
O3': (-72.317,-62.015,-7.503)
OP2: (-71.079,-65.333,-7.586)
C3': (-73.402,-62.390,-8.313)
C1': (-73.991,-62.963,-10.554)
C5': (-74.016,-64.653,-7.370)
O6: (-79.049,-60.100,-12.074)
O4': (-74.000,-64.141,-9.773)
C8: (-76.526,-63.096,-10.299)
C2: (-75.588,-59.580,-12.666)
C6: (-77.830,-60.323,-12.018)
C5: (-77.131,-61.376,-11.380)
C4: (-75.764,-61.412,-11.459)
P: (-71.995,-66.276,-6.891)
C4': (-73.349,-63.883,-8.497)
C2': (-73.222,-61.912,-9.745)
O2': (-71.862,-61.866,-10.113)
N1: (-76.956,-59.452,-12.653)
N2: (-74.901,-58.637,-13.330)
N3: (-74.929,-60.560,-12.077)
N7: (-77.601,-62.448,-10.641)
N9: (-75.370,-62.526,-10.769)
O5': (-73.512,-65.997,-7.333)
O3': (-72.317,-62.015,-7.503)
Image (generated by PyMOL):