ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A306:A86

Extra

PDB:
ATOM 1 O3' G A 305 36.109 -3.975 76.691 1.00 78.80 O
ATOM 2 P A A 306 34.714 -3.217 76.472 1.00 84.00 P
ATOM 3 OP1 A A 306 34.180 -2.892 77.812 1.00 93.62 O
ATOM 4 OP2 A A 306 33.898 -4.021 75.530 1.00 83.21 O
ATOM 5 O5' A A 306 35.066 -1.871 75.693 1.00 74.40 O
ATOM 6 C5' A A 306 34.035 -1.130 75.033 1.00 77.87 C
ATOM 7 C4' A A 306 34.595 0.134 74.438 1.00 77.46 C
ATOM 8 O4' A A 306 35.241 0.864 75.503 1.00 87.41 O
ATOM 9 C3' A A 306 35.661 -0.055 73.371 1.00 74.31 C
ATOM 10 O3' A A 306 35.031 -0.103 72.090 1.00 74.29 O
ATOM 11 C2' A A 306 36.529 1.192 73.515 1.00 82.62 C
ATOM 12 O2' A A 306 36.064 2.295 72.766 1.00 87.46 O
ATOM 13 C1' A A 306 36.388 1.514 75.006 1.00 86.47 C
ATOM 14 N9 A A 306 37.534 1.152 75.840 1.00 84.82 N
ATOM 15 C8 A A 306 37.705 0.070 76.679 1.00 84.13 C
ATOM 16 N7 A A 306 38.866 0.054 77.291 1.00 82.29 N
ATOM 17 C5 A A 306 39.500 1.197 76.823 1.00 84.54 C
ATOM 18 C6 A A 306 40.766 1.746 77.078 1.00 86.82 C
ATOM 19 N6 A A 306 41.656 1.193 77.907 1.00 88.80 N
ATOM 20 N1 A A 306 41.094 2.896 76.444 1.00 85.20 N
ATOM 21 C2 A A 306 40.201 3.446 75.611 1.00 88.15 C
ATOM 22 N3 A A 306 38.982 3.025 75.287 1.00 82.46 N
ATOM 23 C4 A A 306 38.690 1.882 75.933 1.00 82.05 C
ATOM 24 P G A 307 35.737 -0.872 70.858 1.00 81.64 P
ATOM 25 OP1 G A 307 35.032 -0.474 69.607 1.00 71.33 O
ATOM 26 OP2 G A 307 35.819 -2.311 71.223 1.00 76.18 O
ATOM 27 O5' G A 307 37.222 -0.283 70.808 1.00 83.75 O
TER

ATOM 1 O3' C B 85 40.792 -1.439 82.748 1.00 78.95 O
ATOM 2 P G B 86 41.194 -1.461 81.173 1.00 79.77 P
ATOM 3 OP1 G B 86 40.833 -0.143 80.587 1.00 71.87 O
ATOM 4 OP2 G B 86 40.665 -2.698 80.542 1.00 76.58 O
ATOM 5 O5' G B 86 42.783 -1.570 81.174 1.00 70.30 O
ATOM 6 C5' G B 86 43.552 -0.419 80.878 1.00 69.73 C
ATOM 7 C4' G B 86 44.875 -0.448 81.602 1.00 73.18 C
ATOM 8 O4' G B 86 44.824 -1.350 82.735 1.00 70.15 O
ATOM 9 C3' G B 86 46.038 -0.963 80.779 1.00 71.17 C
ATOM 10 O3' G B 86 46.469 0.004 79.848 1.00 67.58 O
ATOM 11 C2' G B 86 47.024 -1.409 81.849 1.00 74.22 C
ATOM 12 O2' G B 86 47.776 -0.378 82.456 1.00 76.84 O
ATOM 13 C1' G B 86 46.067 -2.027 82.867 1.00 72.67 C
ATOM 14 N9 G B 86 45.858 -3.423 82.497 1.00 79.37 N
ATOM 15 C8 G B 86 44.665 -4.058 82.228 1.00 79.15 C
ATOM 16 N7 G B 86 44.821 -5.294 81.842 1.00 77.24 N
ATOM 17 C5 G B 86 46.193 -5.490 81.872 1.00 75.36 C
ATOM 18 C6 G B 86 46.948 -6.619 81.549 1.00 73.25 C
ATOM 19 O6 G B 86 46.552 -7.714 81.143 1.00 82.11 O
ATOM 20 N1 G B 86 48.305 -6.392 81.730 1.00 70.50 N
ATOM 21 C2 G B 86 48.858 -5.220 82.166 1.00 74.84 C
ATOM 22 N2 G B 86 50.190 -5.198 82.286 1.00 79.59 N
ATOM 23 N3 G B 86 48.161 -4.152 82.466 1.00 73.21 N
ATOM 24 C4 G B 86 46.843 -4.355 82.296 1.00 76.82 C
ATOM 25 P G B 87 46.138 -0.233 78.298 1.00 68.41 P
ATOM 26 OP1 G B 87 46.466 1.002 77.555 1.00 70.69 O
ATOM 27 OP2 G B 87 44.768 -0.806 78.188 1.00 71.11 O
ATOM 28 O5' G B 87 47.180 -1.371 77.914 1.00 78.84 O
TER

Atoms:
OP1: (34.180,-2.892,77.812)
OP2: (33.898,-4.021,75.530)
C3': (35.661,-0.055,73.371)
C1': (36.388,1.514,75.006)
C5': (34.035,-1.130,75.033)
O4': (35.241,0.864,75.503)
C8: (37.705,0.070,76.679)
O2': (36.064,2.295,72.766)
C6: (40.766,1.746,77.078)
C5: (39.500,1.197,76.823)
C4: (38.690,1.882,75.933)
P: (34.714,-3.217,76.472)
C4': (34.595,0.134,74.438)
C2': (36.529,1.192,73.515)
C2: (40.201,3.446,75.611)
N1: (41.094,2.896,76.444)
N3: (38.982,3.025,75.287)
N6: (41.656,1.193,77.907)
N7: (38.866,0.054,77.291)
N9: (37.534,1.152,75.840)
O5': (35.066,-1.871,75.693)
O3': (35.031,-0.103,72.090)
OP1: (40.833,-0.143,80.587)
OP2: (40.665,-2.698,80.542)
C3': (46.038,-0.963,80.779)
C1': (46.067,-2.027,82.867)
C5': (43.552,-0.419,80.878)
O6: (46.552,-7.714,81.143)
O4': (44.824,-1.350,82.735)
C8: (44.665,-4.058,82.228)
C2: (48.858,-5.220,82.166)
C6: (46.948,-6.619,81.549)
C5: (46.193,-5.490,81.872)
C4: (46.843,-4.355,82.296)
P: (41.194,-1.461,81.173)
C4': (44.875,-0.448,81.602)
C2': (47.024,-1.409,81.849)
O2': (47.776,-0.378,82.456)
N1: (48.305,-6.392,81.730)
N2: (50.190,-5.198,82.286)
N3: (48.161,-4.152,82.466)
N7: (44.821,-5.294,81.842)
N9: (45.858,-3.423,82.497)
O5': (42.783,-1.570,81.174)
O3': (46.469,0.004,79.848)
Image (generated by PyMOL):
PyMOL image
show in jmol