Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B49:B48
Extra
PDB:
ATOM 1 O3' G A 48 25.604 0.503 -0.308 1.00 74.49 O
ATOM 2 P A A 49 24.025 0.742 -0.180 1.00 74.31 P
ATOM 3 OP1 A A 49 23.782 2.193 -0.354 1.00 75.49 O
ATOM 4 OP2 A A 49 23.539 0.076 1.050 1.00 73.95 O
ATOM 5 O5' A A 49 23.444 -0.052 -1.445 1.00 74.11 O
ATOM 6 C5' A A 49 23.137 0.613 -2.675 1.00 75.16 C
ATOM 7 C4' A A 49 22.873 -0.365 -3.815 1.00 74.71 C
ATOM 8 O4' A A 49 24.113 -1.002 -4.213 1.00 73.97 O
ATOM 9 C3' A A 49 21.899 -1.498 -3.515 1.00 73.84 C
ATOM 10 O3' A A 49 20.568 -1.100 -3.860 1.00 74.96 O
ATOM 11 C2' A A 49 22.426 -2.640 -4.386 1.00 72.73 C
ATOM 12 O2' A A 49 21.906 -2.622 -5.700 1.00 72.82 O
ATOM 13 C1' A A 49 23.927 -2.383 -4.451 1.00 72.75 C
ATOM 14 N9 A A 49 24.779 -3.081 -3.489 1.00 72.17 N
ATOM 15 C8 A A 49 24.611 -3.158 -2.136 1.00 72.11 C
ATOM 16 N7 A A 49 25.550 -3.834 -1.521 1.00 71.94 N
ATOM 17 C5 A A 49 26.406 -4.218 -2.536 1.00 71.74 C
ATOM 18 C6 A A 49 27.609 -4.962 -2.539 1.00 71.66 C
ATOM 19 N6 A A 49 28.157 -5.462 -1.428 1.00 71.46 N
ATOM 20 N1 A A 49 28.229 -5.175 -3.728 1.00 71.72 N
ATOM 21 C2 A A 49 27.672 -4.669 -4.838 1.00 71.77 C
ATOM 22 N3 A A 49 26.545 -3.956 -4.956 1.00 72.24 N
ATOM 23 C4 A A 49 25.950 -3.760 -3.760 1.00 72.06 C
ATOM 24 P A A 50 19.296 -1.709 -3.093 1.00 75.45 P
ATOM 25 OP1 A A 50 18.101 -0.918 -3.456 1.00 76.13 O
ATOM 26 OP2 A A 50 19.634 -1.894 -1.661 1.00 75.77 O
ATOM 27 O5' A A 50 19.162 -3.158 -3.748 1.00 75.24 O
TER
ATOM 1 O3' G B 47 27.504 -4.542 3.775 1.00 76.33 O
ATOM 2 P G B 48 27.984 -4.036 2.327 1.00 75.59 P
ATOM 3 OP1 G B 48 27.898 -5.200 1.415 1.00 74.51 O
ATOM 4 OP2 G B 48 29.279 -3.334 2.488 1.00 75.80 O
ATOM 5 O5' G B 48 26.866 -2.966 1.894 1.00 75.89 O
ATOM 6 C5' G B 48 26.774 -1.650 2.474 1.00 75.32 C
ATOM 7 C4' G B 48 26.904 -0.525 1.448 1.00 74.99 C
ATOM 8 O4' G B 48 28.308 -0.268 1.181 1.00 74.93 O
ATOM 9 C3' G B 48 26.235 -0.716 0.085 1.00 73.94 C
ATOM 10 O3' G B 48 25.604 0.503 -0.308 1.00 74.49 O
ATOM 11 C2' G B 48 27.413 -1.054 -0.827 1.00 73.76 C
ATOM 12 O2' G B 48 27.199 -0.675 -2.173 1.00 74.20 O
ATOM 13 C1' G B 48 28.526 -0.215 -0.211 1.00 74.59 C
ATOM 14 N9 G B 48 29.867 -0.719 -0.498 1.00 74.07 N
ATOM 15 C8 G B 48 30.529 -1.739 0.146 1.00 73.30 C
ATOM 16 N7 G B 48 31.720 -1.980 -0.329 1.00 72.99 N
ATOM 17 C5 G B 48 31.859 -1.059 -1.354 1.00 73.66 C
ATOM 18 C6 G B 48 32.944 -0.841 -2.233 1.00 74.00 C
ATOM 19 O6 G B 48 34.023 -1.446 -2.268 1.00 73.60 O
ATOM 20 N1 G B 48 32.682 0.192 -3.137 1.00 74.99 N
ATOM 21 C2 G B 48 31.513 0.923 -3.182 1.00 75.15 C
ATOM 22 N2 G B 48 31.437 1.880 -4.117 1.00 75.97 N
ATOM 23 N3 G B 48 30.489 0.727 -2.360 1.00 74.79 N
ATOM 24 C4 G B 48 30.729 -0.273 -1.473 1.00 74.23 C
ATOM 25 P A B 49 24.025 0.742 -0.180 1.00 74.31 P
ATOM 26 OP1 A B 49 23.782 2.193 -0.354 1.00 75.49 O
ATOM 27 OP2 A B 49 23.539 0.076 1.050 1.00 73.95 O
ATOM 28 O5' A B 49 23.444 -0.052 -1.445 1.00 74.11 O
TER
ATOM 2 P A A 49 24.025 0.742 -0.180 1.00 74.31 P
ATOM 3 OP1 A A 49 23.782 2.193 -0.354 1.00 75.49 O
ATOM 4 OP2 A A 49 23.539 0.076 1.050 1.00 73.95 O
ATOM 5 O5' A A 49 23.444 -0.052 -1.445 1.00 74.11 O
ATOM 6 C5' A A 49 23.137 0.613 -2.675 1.00 75.16 C
ATOM 7 C4' A A 49 22.873 -0.365 -3.815 1.00 74.71 C
ATOM 8 O4' A A 49 24.113 -1.002 -4.213 1.00 73.97 O
ATOM 9 C3' A A 49 21.899 -1.498 -3.515 1.00 73.84 C
ATOM 10 O3' A A 49 20.568 -1.100 -3.860 1.00 74.96 O
ATOM 11 C2' A A 49 22.426 -2.640 -4.386 1.00 72.73 C
ATOM 12 O2' A A 49 21.906 -2.622 -5.700 1.00 72.82 O
ATOM 13 C1' A A 49 23.927 -2.383 -4.451 1.00 72.75 C
ATOM 14 N9 A A 49 24.779 -3.081 -3.489 1.00 72.17 N
ATOM 15 C8 A A 49 24.611 -3.158 -2.136 1.00 72.11 C
ATOM 16 N7 A A 49 25.550 -3.834 -1.521 1.00 71.94 N
ATOM 17 C5 A A 49 26.406 -4.218 -2.536 1.00 71.74 C
ATOM 18 C6 A A 49 27.609 -4.962 -2.539 1.00 71.66 C
ATOM 19 N6 A A 49 28.157 -5.462 -1.428 1.00 71.46 N
ATOM 20 N1 A A 49 28.229 -5.175 -3.728 1.00 71.72 N
ATOM 21 C2 A A 49 27.672 -4.669 -4.838 1.00 71.77 C
ATOM 22 N3 A A 49 26.545 -3.956 -4.956 1.00 72.24 N
ATOM 23 C4 A A 49 25.950 -3.760 -3.760 1.00 72.06 C
ATOM 24 P A A 50 19.296 -1.709 -3.093 1.00 75.45 P
ATOM 25 OP1 A A 50 18.101 -0.918 -3.456 1.00 76.13 O
ATOM 26 OP2 A A 50 19.634 -1.894 -1.661 1.00 75.77 O
ATOM 27 O5' A A 50 19.162 -3.158 -3.748 1.00 75.24 O
TER
ATOM 1 O3' G B 47 27.504 -4.542 3.775 1.00 76.33 O
ATOM 2 P G B 48 27.984 -4.036 2.327 1.00 75.59 P
ATOM 3 OP1 G B 48 27.898 -5.200 1.415 1.00 74.51 O
ATOM 4 OP2 G B 48 29.279 -3.334 2.488 1.00 75.80 O
ATOM 5 O5' G B 48 26.866 -2.966 1.894 1.00 75.89 O
ATOM 6 C5' G B 48 26.774 -1.650 2.474 1.00 75.32 C
ATOM 7 C4' G B 48 26.904 -0.525 1.448 1.00 74.99 C
ATOM 8 O4' G B 48 28.308 -0.268 1.181 1.00 74.93 O
ATOM 9 C3' G B 48 26.235 -0.716 0.085 1.00 73.94 C
ATOM 10 O3' G B 48 25.604 0.503 -0.308 1.00 74.49 O
ATOM 11 C2' G B 48 27.413 -1.054 -0.827 1.00 73.76 C
ATOM 12 O2' G B 48 27.199 -0.675 -2.173 1.00 74.20 O
ATOM 13 C1' G B 48 28.526 -0.215 -0.211 1.00 74.59 C
ATOM 14 N9 G B 48 29.867 -0.719 -0.498 1.00 74.07 N
ATOM 15 C8 G B 48 30.529 -1.739 0.146 1.00 73.30 C
ATOM 16 N7 G B 48 31.720 -1.980 -0.329 1.00 72.99 N
ATOM 17 C5 G B 48 31.859 -1.059 -1.354 1.00 73.66 C
ATOM 18 C6 G B 48 32.944 -0.841 -2.233 1.00 74.00 C
ATOM 19 O6 G B 48 34.023 -1.446 -2.268 1.00 73.60 O
ATOM 20 N1 G B 48 32.682 0.192 -3.137 1.00 74.99 N
ATOM 21 C2 G B 48 31.513 0.923 -3.182 1.00 75.15 C
ATOM 22 N2 G B 48 31.437 1.880 -4.117 1.00 75.97 N
ATOM 23 N3 G B 48 30.489 0.727 -2.360 1.00 74.79 N
ATOM 24 C4 G B 48 30.729 -0.273 -1.473 1.00 74.23 C
ATOM 25 P A B 49 24.025 0.742 -0.180 1.00 74.31 P
ATOM 26 OP1 A B 49 23.782 2.193 -0.354 1.00 75.49 O
ATOM 27 OP2 A B 49 23.539 0.076 1.050 1.00 73.95 O
ATOM 28 O5' A B 49 23.444 -0.052 -1.445 1.00 74.11 O
TER
Atoms:
OP1: (23.782,2.193,-0.354)
OP2: (23.539,0.076,1.050)
C3': (21.899,-1.498,-3.515)
C1': (23.927,-2.383,-4.451)
C5': (23.137,0.613,-2.675)
O4': (24.113,-1.002,-4.213)
C8: (24.611,-3.158,-2.136)
O2': (21.906,-2.622,-5.700)
C6: (27.609,-4.962,-2.539)
C5: (26.406,-4.218,-2.536)
C4: (25.950,-3.760,-3.760)
P: (24.025,0.742,-0.180)
C4': (22.873,-0.365,-3.815)
C2': (22.426,-2.640,-4.386)
C2: (27.672,-4.669,-4.838)
N1: (28.229,-5.175,-3.728)
N3: (26.545,-3.956,-4.956)
N6: (28.157,-5.462,-1.428)
N7: (25.550,-3.834,-1.521)
N9: (24.779,-3.081,-3.489)
O5': (23.444,-0.052,-1.445)
O3': (20.568,-1.100,-3.860)
OP2: (23.539,0.076,1.050)
C3': (21.899,-1.498,-3.515)
C1': (23.927,-2.383,-4.451)
C5': (23.137,0.613,-2.675)
O4': (24.113,-1.002,-4.213)
C8: (24.611,-3.158,-2.136)
O2': (21.906,-2.622,-5.700)
C6: (27.609,-4.962,-2.539)
C5: (26.406,-4.218,-2.536)
C4: (25.950,-3.760,-3.760)
P: (24.025,0.742,-0.180)
C4': (22.873,-0.365,-3.815)
C2': (22.426,-2.640,-4.386)
C2: (27.672,-4.669,-4.838)
N1: (28.229,-5.175,-3.728)
N3: (26.545,-3.956,-4.956)
N6: (28.157,-5.462,-1.428)
N7: (25.550,-3.834,-1.521)
N9: (24.779,-3.081,-3.489)
O5': (23.444,-0.052,-1.445)
O3': (20.568,-1.100,-3.860)
OP1: (27.898,-5.200,1.415)
OP2: (29.279,-3.334,2.488)
C3': (26.235,-0.716,0.085)
C1': (28.526,-0.215,-0.211)
C5': (26.774,-1.650,2.474)
O6: (34.023,-1.446,-2.268)
O4': (28.308,-0.268,1.181)
C8: (30.529,-1.739,0.146)
C2: (31.513,0.923,-3.182)
C6: (32.944,-0.841,-2.233)
C5: (31.859,-1.059,-1.354)
C4: (30.729,-0.273,-1.473)
P: (27.984,-4.036,2.327)
C4': (26.904,-0.525,1.448)
C2': (27.413,-1.054,-0.827)
O2': (27.199,-0.675,-2.173)
N1: (32.682,0.192,-3.137)
N2: (31.437,1.880,-4.117)
N3: (30.489,0.727,-2.360)
N7: (31.720,-1.980,-0.329)
N9: (29.867,-0.719,-0.498)
O5': (26.866,-2.966,1.894)
O3': (25.604,0.503,-0.308)
OP2: (29.279,-3.334,2.488)
C3': (26.235,-0.716,0.085)
C1': (28.526,-0.215,-0.211)
C5': (26.774,-1.650,2.474)
O6: (34.023,-1.446,-2.268)
O4': (28.308,-0.268,1.181)
C8: (30.529,-1.739,0.146)
C2: (31.513,0.923,-3.182)
C6: (32.944,-0.841,-2.233)
C5: (31.859,-1.059,-1.354)
C4: (30.729,-0.273,-1.473)
P: (27.984,-4.036,2.327)
C4': (26.904,-0.525,1.448)
C2': (27.413,-1.054,-0.827)
O2': (27.199,-0.675,-2.173)
N1: (32.682,0.192,-3.137)
N2: (31.437,1.880,-4.117)
N3: (30.489,0.727,-2.360)
N7: (31.720,-1.980,-0.329)
N9: (29.867,-0.719,-0.498)
O5': (26.866,-2.966,1.894)
O3': (25.604,0.503,-0.308)
Image (generated by PyMOL):