ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXE:B50:B49

Extra

PDB:
ATOM 1 O3' G A 49 26.134 0.935 -0.261 1.00 78.29 O
ATOM 2 P A A 50 24.539 1.064 -0.285 1.00 78.16 P
ATOM 3 OP1 A A 50 24.224 2.504 -0.420 1.00 79.13 O
ATOM 4 OP2 A A 50 23.970 0.300 0.847 1.00 77.82 O
ATOM 5 O5' A A 50 24.161 0.291 -1.634 1.00 78.34 O
ATOM 6 C5' A A 50 23.533 0.942 -2.736 1.00 79.75 C
ATOM 7 C4' A A 50 23.345 -0.034 -3.881 1.00 79.68 C
ATOM 8 O4' A A 50 24.618 -0.646 -4.190 1.00 79.77 O
ATOM 9 C3' A A 50 22.412 -1.196 -3.587 1.00 78.94 C
ATOM 10 O3' A A 50 21.089 -0.824 -3.933 1.00 79.47 O
ATOM 11 C2' A A 50 22.960 -2.313 -4.474 1.00 78.57 C
ATOM 12 O2' A A 50 22.445 -2.280 -5.792 1.00 78.33 O
ATOM 13 C1' A A 50 24.458 -2.018 -4.502 1.00 79.45 C
ATOM 14 N9 A A 50 25.318 -2.778 -3.585 1.00 80.04 N
ATOM 15 C8 A A 50 25.180 -2.932 -2.230 1.00 80.24 C
ATOM 16 N7 A A 50 26.121 -3.660 -1.673 1.00 79.95 N
ATOM 17 C5 A A 50 26.947 -4.004 -2.732 1.00 80.01 C
ATOM 18 C6 A A 50 28.136 -4.772 -2.815 1.00 79.73 C
ATOM 19 N6 A A 50 28.718 -5.355 -1.760 1.00 79.32 N
ATOM 20 N1 A A 50 28.712 -4.925 -4.032 1.00 79.87 N
ATOM 21 C2 A A 50 28.134 -4.345 -5.095 1.00 80.36 C
ATOM 22 N3 A A 50 27.023 -3.603 -5.142 1.00 80.67 N
ATOM 23 C4 A A 50 26.468 -3.466 -3.918 1.00 80.32 C
ATOM 24 P A A 51 19.832 -1.434 -3.157 1.00 79.04 P
ATOM 25 OP1 A A 51 18.658 -0.610 -3.514 1.00 80.32 O
ATOM 26 OP2 A A 51 20.186 -1.637 -1.732 1.00 79.03 O
ATOM 27 O5' A A 51 19.670 -2.877 -3.818 1.00 78.39 O
TER

ATOM 1 O3' G B 48 28.051 -4.111 3.687 1.00 76.65 O
ATOM 2 P G B 49 28.468 -3.565 2.239 1.00 76.73 P
ATOM 3 OP1 G B 49 28.259 -4.685 1.292 1.00 75.83 O
ATOM 4 OP2 G B 49 29.805 -2.934 2.349 1.00 76.78 O
ATOM 5 O5' G B 49 27.388 -2.418 1.927 1.00 77.30 O
ATOM 6 C5' G B 49 27.480 -1.107 2.496 1.00 77.36 C
ATOM 7 C4' G B 49 27.547 -0.015 1.435 1.00 77.79 C
ATOM 8 O4' G B 49 28.932 0.250 1.079 1.00 77.82 O
ATOM 9 C3' G B 49 26.804 -0.266 0.122 1.00 77.41 C
ATOM 10 O3' G B 49 26.134 0.935 -0.261 1.00 78.29 O
ATOM 11 C2' G B 49 27.930 -0.615 -0.851 1.00 77.24 C
ATOM 12 O2' G B 49 27.625 -0.263 -2.187 1.00 78.09 O
ATOM 13 C1' G B 49 29.080 0.243 -0.327 1.00 77.62 C
ATOM 14 N9 G B 49 30.407 -0.274 -0.661 1.00 76.62 N
ATOM 15 C8 G B 49 31.073 -1.290 -0.019 1.00 75.68 C
ATOM 16 N7 G B 49 32.245 -1.557 -0.520 1.00 75.27 N
ATOM 17 C5 G B 49 32.371 -0.660 -1.569 1.00 75.90 C
ATOM 18 C6 G B 49 33.439 -0.482 -2.481 1.00 76.04 C
ATOM 19 O6 G B 49 34.509 -1.104 -2.532 1.00 75.46 O
ATOM 20 N1 G B 49 33.178 0.535 -3.400 1.00 76.96 N
ATOM 21 C2 G B 49 32.024 1.285 -3.429 1.00 77.53 C
ATOM 22 N2 G B 49 31.956 2.219 -4.389 1.00 78.34 N
ATOM 23 N3 G B 49 31.012 1.126 -2.578 1.00 77.41 N
ATOM 24 C4 G B 49 31.250 0.141 -1.672 1.00 76.70 C
ATOM 25 P A B 50 24.539 1.064 -0.285 1.00 78.16 P
ATOM 26 OP1 A B 50 24.224 2.504 -0.420 1.00 79.13 O
ATOM 27 OP2 A B 50 23.970 0.300 0.847 1.00 77.82 O
ATOM 28 O5' A B 50 24.161 0.291 -1.634 1.00 78.34 O
TER

Atoms:
OP1: (24.224,2.504,-0.420)
OP2: (23.970,0.300,0.847)
C3': (22.412,-1.196,-3.587)
C1': (24.458,-2.018,-4.502)
C5': (23.533,0.942,-2.736)
O4': (24.618,-0.646,-4.190)
C8: (25.180,-2.932,-2.230)
O2': (22.445,-2.280,-5.792)
C6: (28.136,-4.772,-2.815)
C5: (26.947,-4.004,-2.732)
C4: (26.468,-3.466,-3.918)
P: (24.539,1.064,-0.285)
C4': (23.345,-0.034,-3.881)
C2': (22.960,-2.313,-4.474)
C2: (28.134,-4.345,-5.095)
N1: (28.712,-4.925,-4.032)
N3: (27.023,-3.603,-5.142)
N6: (28.718,-5.355,-1.760)
N7: (26.121,-3.660,-1.673)
N9: (25.318,-2.778,-3.585)
O5': (24.161,0.291,-1.634)
O3': (21.089,-0.824,-3.933)
OP1: (28.259,-4.685,1.292)
OP2: (29.805,-2.934,2.349)
C3': (26.804,-0.266,0.122)
C1': (29.080,0.243,-0.327)
C5': (27.480,-1.107,2.496)
O6: (34.509,-1.104,-2.532)
O4': (28.932,0.250,1.079)
C8: (31.073,-1.290,-0.019)
C2: (32.024,1.285,-3.429)
C6: (33.439,-0.482,-2.481)
C5: (32.371,-0.660,-1.569)
C4: (31.250,0.141,-1.672)
P: (28.468,-3.565,2.239)
C4': (27.547,-0.015,1.435)
C2': (27.930,-0.615,-0.851)
O2': (27.625,-0.263,-2.187)
N1: (33.178,0.535,-3.400)
N2: (31.956,2.219,-4.389)
N3: (31.012,1.126,-2.578)
N7: (32.245,-1.557,-0.520)
N9: (30.407,-0.274,-0.661)
O5': (27.388,-2.418,1.927)
O3': (26.134,0.935,-0.261)
Image (generated by PyMOL):
PyMOL image
show in jmol