Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:V54:V60
Extra
PDB:
ATOM 1 O3' U A 53 -8.478 4.890 20.133 1.00 43.50 O
ATOM 2 P A A 54 -9.118 6.103 19.332 1.00 53.26 P
ATOM 3 OP1 A A 54 -9.828 5.499 18.188 1.00 55.66 O
ATOM 4 OP2 A A 54 -8.094 7.156 19.097 1.00 44.80 O
ATOM 5 O5' A A 54 -10.157 6.695 20.391 1.00 51.17 O
ATOM 6 C5' A A 54 -11.183 5.884 20.940 1.00 50.87 C
ATOM 7 C4' A A 54 -12.544 6.444 20.584 1.00 49.21 C
ATOM 8 O4' A A 54 -12.543 7.882 20.743 1.00 49.03 O
ATOM 9 C3' A A 54 -12.957 6.220 19.143 1.00 48.21 C
ATOM 10 O3' A A 54 -13.506 4.919 19.001 1.00 50.78 O
ATOM 11 C2' A A 54 -13.976 7.332 18.945 1.00 49.00 C
ATOM 12 O2' A A 54 -15.260 6.980 19.410 1.00 51.07 O
ATOM 13 C1' A A 54 -13.417 8.465 19.800 1.00 45.09 C
ATOM 14 N9 A A 54 -12.686 9.504 19.081 1.00 45.56 N
ATOM 15 C8 A A 54 -11.332 9.631 18.951 1.00 49.03 C
ATOM 16 N7 A A 54 -10.959 10.685 18.263 1.00 52.60 N
ATOM 17 C5 A A 54 -12.148 11.298 17.918 1.00 48.75 C
ATOM 18 C6 A A 54 -12.437 12.471 17.187 1.00 50.86 C
ATOM 19 N6 A A 54 -11.499 13.251 16.645 1.00 49.51 N
ATOM 20 N1 A A 54 -13.732 12.808 17.024 1.00 48.76 N
ATOM 21 C2 A A 54 -14.669 12.020 17.568 1.00 50.00 C
ATOM 22 N3 A A 54 -14.517 10.895 18.273 1.00 48.13 N
ATOM 23 C4 A A 54 -13.221 10.584 18.415 1.00 47.13 C
ATOM 24 P G A 55 -13.449 4.114 17.621 1.00 51.93 P
ATOM 25 OP1 G A 55 -14.117 2.810 17.834 1.00 63.55 O
ATOM 26 OP2 G A 55 -12.064 4.153 17.116 1.00 52.80 O
ATOM 27 O5' G A 55 -14.354 4.996 16.651 1.00 54.38 O
TER
ATOM 1 O3' U B 59 -6.497 12.564 14.793 1.00 53.60 O
ATOM 2 P G B 60 -7.121 13.189 16.127 1.00 55.34 P
ATOM 3 OP1 G B 60 -6.019 13.312 17.107 1.00 58.37 O
ATOM 4 OP2 G B 60 -8.343 12.441 16.501 1.00 53.43 O
ATOM 5 O5' G B 60 -7.538 14.648 15.623 1.00 51.92 O
ATOM 6 C5' G B 60 -6.501 15.550 15.219 1.00 56.86 C
ATOM 7 C4' G B 60 -7.067 16.880 14.769 1.00 56.74 C
ATOM 8 O4' G B 60 -7.832 16.706 13.556 1.00 58.92 O
ATOM 9 C3' G B 60 -8.056 17.504 15.734 1.00 59.33 C
ATOM 10 O3' G B 60 -7.368 18.141 16.793 1.00 56.21 O
ATOM 11 C2' G B 60 -8.795 18.459 14.810 1.00 65.59 C
ATOM 12 O2' G B 60 -8.083 19.656 14.551 1.00 74.37 O
ATOM 13 C1' G B 60 -8.916 17.622 13.540 1.00 59.80 C
ATOM 14 N9 G B 60 -10.163 16.865 13.406 1.00 56.81 N
ATOM 15 C8 G B 60 -10.349 15.528 13.676 1.00 60.61 C
ATOM 16 N7 G B 60 -11.563 15.110 13.454 1.00 58.54 N
ATOM 17 C5 G B 60 -12.230 16.239 13.001 1.00 58.91 C
ATOM 18 C6 G B 60 -13.580 16.394 12.598 1.00 61.97 C
ATOM 19 O6 G B 60 -14.475 15.538 12.565 1.00 65.53 O
ATOM 20 N1 G B 60 -13.864 17.700 12.208 1.00 64.65 N
ATOM 21 C2 G B 60 -12.955 18.734 12.205 1.00 65.03 C
ATOM 22 N2 G B 60 -13.422 19.921 11.790 1.00 67.17 N
ATOM 23 N3 G B 60 -11.681 18.603 12.577 1.00 60.39 N
ATOM 24 C4 G B 60 -11.386 17.330 12.964 1.00 58.66 C
ATOM 25 P C B 61 -7.973 18.190 18.275 1.00 62.14 P
ATOM 26 OP1 C B 61 -6.990 18.901 19.124 1.00 62.73 O
ATOM 27 OP2 C B 61 -8.410 16.831 18.670 1.00 62.61 O
ATOM 28 O5' C B 61 -9.274 19.111 18.089 1.00 61.69 O
TER
ATOM 2 P A A 54 -9.118 6.103 19.332 1.00 53.26 P
ATOM 3 OP1 A A 54 -9.828 5.499 18.188 1.00 55.66 O
ATOM 4 OP2 A A 54 -8.094 7.156 19.097 1.00 44.80 O
ATOM 5 O5' A A 54 -10.157 6.695 20.391 1.00 51.17 O
ATOM 6 C5' A A 54 -11.183 5.884 20.940 1.00 50.87 C
ATOM 7 C4' A A 54 -12.544 6.444 20.584 1.00 49.21 C
ATOM 8 O4' A A 54 -12.543 7.882 20.743 1.00 49.03 O
ATOM 9 C3' A A 54 -12.957 6.220 19.143 1.00 48.21 C
ATOM 10 O3' A A 54 -13.506 4.919 19.001 1.00 50.78 O
ATOM 11 C2' A A 54 -13.976 7.332 18.945 1.00 49.00 C
ATOM 12 O2' A A 54 -15.260 6.980 19.410 1.00 51.07 O
ATOM 13 C1' A A 54 -13.417 8.465 19.800 1.00 45.09 C
ATOM 14 N9 A A 54 -12.686 9.504 19.081 1.00 45.56 N
ATOM 15 C8 A A 54 -11.332 9.631 18.951 1.00 49.03 C
ATOM 16 N7 A A 54 -10.959 10.685 18.263 1.00 52.60 N
ATOM 17 C5 A A 54 -12.148 11.298 17.918 1.00 48.75 C
ATOM 18 C6 A A 54 -12.437 12.471 17.187 1.00 50.86 C
ATOM 19 N6 A A 54 -11.499 13.251 16.645 1.00 49.51 N
ATOM 20 N1 A A 54 -13.732 12.808 17.024 1.00 48.76 N
ATOM 21 C2 A A 54 -14.669 12.020 17.568 1.00 50.00 C
ATOM 22 N3 A A 54 -14.517 10.895 18.273 1.00 48.13 N
ATOM 23 C4 A A 54 -13.221 10.584 18.415 1.00 47.13 C
ATOM 24 P G A 55 -13.449 4.114 17.621 1.00 51.93 P
ATOM 25 OP1 G A 55 -14.117 2.810 17.834 1.00 63.55 O
ATOM 26 OP2 G A 55 -12.064 4.153 17.116 1.00 52.80 O
ATOM 27 O5' G A 55 -14.354 4.996 16.651 1.00 54.38 O
TER
ATOM 1 O3' U B 59 -6.497 12.564 14.793 1.00 53.60 O
ATOM 2 P G B 60 -7.121 13.189 16.127 1.00 55.34 P
ATOM 3 OP1 G B 60 -6.019 13.312 17.107 1.00 58.37 O
ATOM 4 OP2 G B 60 -8.343 12.441 16.501 1.00 53.43 O
ATOM 5 O5' G B 60 -7.538 14.648 15.623 1.00 51.92 O
ATOM 6 C5' G B 60 -6.501 15.550 15.219 1.00 56.86 C
ATOM 7 C4' G B 60 -7.067 16.880 14.769 1.00 56.74 C
ATOM 8 O4' G B 60 -7.832 16.706 13.556 1.00 58.92 O
ATOM 9 C3' G B 60 -8.056 17.504 15.734 1.00 59.33 C
ATOM 10 O3' G B 60 -7.368 18.141 16.793 1.00 56.21 O
ATOM 11 C2' G B 60 -8.795 18.459 14.810 1.00 65.59 C
ATOM 12 O2' G B 60 -8.083 19.656 14.551 1.00 74.37 O
ATOM 13 C1' G B 60 -8.916 17.622 13.540 1.00 59.80 C
ATOM 14 N9 G B 60 -10.163 16.865 13.406 1.00 56.81 N
ATOM 15 C8 G B 60 -10.349 15.528 13.676 1.00 60.61 C
ATOM 16 N7 G B 60 -11.563 15.110 13.454 1.00 58.54 N
ATOM 17 C5 G B 60 -12.230 16.239 13.001 1.00 58.91 C
ATOM 18 C6 G B 60 -13.580 16.394 12.598 1.00 61.97 C
ATOM 19 O6 G B 60 -14.475 15.538 12.565 1.00 65.53 O
ATOM 20 N1 G B 60 -13.864 17.700 12.208 1.00 64.65 N
ATOM 21 C2 G B 60 -12.955 18.734 12.205 1.00 65.03 C
ATOM 22 N2 G B 60 -13.422 19.921 11.790 1.00 67.17 N
ATOM 23 N3 G B 60 -11.681 18.603 12.577 1.00 60.39 N
ATOM 24 C4 G B 60 -11.386 17.330 12.964 1.00 58.66 C
ATOM 25 P C B 61 -7.973 18.190 18.275 1.00 62.14 P
ATOM 26 OP1 C B 61 -6.990 18.901 19.124 1.00 62.73 O
ATOM 27 OP2 C B 61 -8.410 16.831 18.670 1.00 62.61 O
ATOM 28 O5' C B 61 -9.274 19.111 18.089 1.00 61.69 O
TER
Atoms:
OP1: (-9.828,5.499,18.188)
OP2: (-8.094,7.156,19.097)
C3': (-12.957,6.220,19.143)
C1': (-13.417,8.465,19.800)
C5': (-11.183,5.884,20.940)
O4': (-12.543,7.882,20.743)
C8: (-11.332,9.631,18.951)
O2': (-15.260,6.980,19.410)
C6: (-12.437,12.471,17.187)
C5: (-12.148,11.298,17.918)
C4: (-13.221,10.584,18.415)
P: (-9.118,6.103,19.332)
C4': (-12.544,6.444,20.584)
C2': (-13.976,7.332,18.945)
C2: (-14.669,12.020,17.568)
N1: (-13.732,12.808,17.024)
N3: (-14.517,10.895,18.273)
N6: (-11.499,13.251,16.645)
N7: (-10.959,10.685,18.263)
N9: (-12.686,9.504,19.081)
O5': (-10.157,6.695,20.391)
O3': (-13.506,4.919,19.001)
OP2: (-8.094,7.156,19.097)
C3': (-12.957,6.220,19.143)
C1': (-13.417,8.465,19.800)
C5': (-11.183,5.884,20.940)
O4': (-12.543,7.882,20.743)
C8: (-11.332,9.631,18.951)
O2': (-15.260,6.980,19.410)
C6: (-12.437,12.471,17.187)
C5: (-12.148,11.298,17.918)
C4: (-13.221,10.584,18.415)
P: (-9.118,6.103,19.332)
C4': (-12.544,6.444,20.584)
C2': (-13.976,7.332,18.945)
C2: (-14.669,12.020,17.568)
N1: (-13.732,12.808,17.024)
N3: (-14.517,10.895,18.273)
N6: (-11.499,13.251,16.645)
N7: (-10.959,10.685,18.263)
N9: (-12.686,9.504,19.081)
O5': (-10.157,6.695,20.391)
O3': (-13.506,4.919,19.001)
OP1: (-6.019,13.312,17.107)
OP2: (-8.343,12.441,16.501)
C3': (-8.056,17.504,15.734)
C1': (-8.916,17.622,13.540)
C5': (-6.501,15.550,15.219)
O6: (-14.475,15.538,12.565)
O4': (-7.832,16.706,13.556)
C8: (-10.349,15.528,13.676)
C2: (-12.955,18.734,12.205)
C6: (-13.580,16.394,12.598)
C5: (-12.230,16.239,13.001)
C4: (-11.386,17.330,12.964)
P: (-7.121,13.189,16.127)
C4': (-7.067,16.880,14.769)
C2': (-8.795,18.459,14.810)
O2': (-8.083,19.656,14.551)
N1: (-13.864,17.700,12.208)
N2: (-13.422,19.921,11.790)
N3: (-11.681,18.603,12.577)
N7: (-11.563,15.110,13.454)
N9: (-10.163,16.865,13.406)
O5': (-7.538,14.648,15.623)
O3': (-7.368,18.141,16.793)
OP2: (-8.343,12.441,16.501)
C3': (-8.056,17.504,15.734)
C1': (-8.916,17.622,13.540)
C5': (-6.501,15.550,15.219)
O6: (-14.475,15.538,12.565)
O4': (-7.832,16.706,13.556)
C8: (-10.349,15.528,13.676)
C2: (-12.955,18.734,12.205)
C6: (-13.580,16.394,12.598)
C5: (-12.230,16.239,13.001)
C4: (-11.386,17.330,12.964)
P: (-7.121,13.189,16.127)
C4': (-7.067,16.880,14.769)
C2': (-8.795,18.459,14.810)
O2': (-8.083,19.656,14.551)
N1: (-13.864,17.700,12.208)
N2: (-13.422,19.921,11.790)
N3: (-11.681,18.603,12.577)
N7: (-11.563,15.110,13.454)
N9: (-10.163,16.865,13.406)
O5': (-7.538,14.648,15.623)
O3': (-7.368,18.141,16.793)
Image (generated by PyMOL):