Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12734:12699
Extra
PDB:
ATOM 1 O3' U A2733 36.902 25.050 71.431 1.00 47.17 O
ATOM 2 P A A2734 36.668 26.243 70.362 1.00 43.83 P
ATOM 3 OP1 A A2734 36.900 27.515 71.109 1.00 44.14 O
ATOM 4 OP2 A A2734 35.350 26.036 69.721 1.00 43.81 O
ATOM 5 O5' A A2734 37.842 26.012 69.305 1.00 43.70 O
ATOM 6 C5' A A2734 39.187 26.072 69.710 1.00 43.69 C
ATOM 7 C4' A A2734 40.097 26.144 68.538 1.00 43.65 C
ATOM 8 O4' A A2734 39.909 24.981 67.725 1.00 43.38 O
ATOM 9 C3' A A2734 39.865 27.305 67.606 1.00 43.89 C
ATOM 10 O3' A A2734 40.541 28.472 68.042 1.00 44.15 O
ATOM 11 C2' A A2734 40.370 26.772 66.272 1.00 43.73 C
ATOM 12 O2' A A2734 41.765 26.946 66.135 1.00 43.74 O
ATOM 13 C1' A A2734 40.075 25.295 66.378 1.00 43.41 C
ATOM 14 N9 A A2734 38.845 24.976 65.686 1.00 43.37 N
ATOM 15 C8 A A2734 37.590 25.080 66.175 1.00 43.44 C
ATOM 16 N7 A A2734 36.698 24.772 65.294 1.00 43.40 N
ATOM 17 C5 A A2734 37.431 24.466 64.157 1.00 43.30 C
ATOM 18 C6 A A2734 37.085 24.038 62.865 1.00 43.23 C
ATOM 19 N6 A A2734 35.826 23.863 62.462 1.00 43.25 N
ATOM 20 N1 A A2734 38.093 23.820 61.969 1.00 43.16 N
ATOM 21 C2 A A2734 39.354 24.007 62.355 1.00 43.15 C
ATOM 22 N3 A A2734 39.784 24.373 63.539 1.00 43.21 N
ATOM 23 C4 A A2734 38.771 24.610 64.385 1.00 43.29 C
ATOM 24 P C A2735 40.193 29.934 67.455 1.00 50.23 P
ATOM 25 OP1 C A2735 39.202 30.545 68.353 1.00 50.43 O
ATOM 26 OP2 C A2735 39.870 29.807 66.004 1.00 50.18 O
ATOM 27 O5' C A2735 41.528 30.687 67.609 1.00 50.39 O
TER
ATOM 1 O3' A B2698 31.652 24.096 64.733 1.00 39.94 O
ATOM 2 P G B2699 31.832 25.105 63.522 1.00 43.89 P
ATOM 3 OP1 G B2699 33.272 25.488 63.493 1.00 43.89 O
ATOM 4 OP2 G B2699 30.795 26.176 63.692 1.00 44.19 O
ATOM 5 O5' G B2699 31.482 24.222 62.243 1.00 43.74 O
ATOM 6 C5' G B2699 30.263 23.492 62.153 1.00 43.68 C
ATOM 7 C4' G B2699 29.078 24.397 62.088 1.00 43.95 C
ATOM 8 O4' G B2699 28.671 24.568 60.718 1.00 44.06 O
ATOM 9 C3' G B2699 27.812 23.905 62.746 1.00 43.94 C
ATOM 10 O3' G B2699 27.846 23.968 64.155 1.00 43.93 O
ATOM 11 C2' G B2699 26.801 24.839 62.137 1.00 44.23 C
ATOM 12 O2' G B2699 26.980 26.097 62.694 1.00 44.48 O
ATOM 13 C1' G B2699 27.297 24.922 60.695 1.00 44.24 C
ATOM 14 N9 G B2699 26.563 24.004 59.806 1.00 44.14 N
ATOM 15 C8 G B2699 27.058 23.011 59.029 1.00 43.93 C
ATOM 16 N7 G B2699 26.149 22.359 58.385 1.00 43.90 N
ATOM 17 C5 G B2699 24.957 22.931 58.775 1.00 44.11 C
ATOM 18 C6 G B2699 23.624 22.625 58.415 1.00 44.20 C
ATOM 19 O6 G B2699 23.225 21.758 57.639 1.00 44.11 O
ATOM 20 N1 G B2699 22.728 23.469 59.006 1.00 44.44 N
ATOM 21 C2 G B2699 23.046 24.475 59.865 1.00 44.58 C
ATOM 22 N2 G B2699 22.037 25.199 60.391 1.00 44.83 N
ATOM 23 N3 G B2699 24.286 24.771 60.230 1.00 44.51 N
ATOM 24 C4 G B2699 25.199 23.961 59.647 1.00 44.27 C
ATOM 25 P C B2700 26.943 22.948 65.029 1.00 38.98 P
ATOM 26 OP1 C B2700 27.510 22.902 66.401 1.00 38.92 O
ATOM 27 OP2 C B2700 26.845 21.697 64.263 1.00 38.74 O
ATOM 28 O5' C B2700 25.519 23.641 65.068 1.00 39.25 O
TER
ATOM 2 P A A2734 36.668 26.243 70.362 1.00 43.83 P
ATOM 3 OP1 A A2734 36.900 27.515 71.109 1.00 44.14 O
ATOM 4 OP2 A A2734 35.350 26.036 69.721 1.00 43.81 O
ATOM 5 O5' A A2734 37.842 26.012 69.305 1.00 43.70 O
ATOM 6 C5' A A2734 39.187 26.072 69.710 1.00 43.69 C
ATOM 7 C4' A A2734 40.097 26.144 68.538 1.00 43.65 C
ATOM 8 O4' A A2734 39.909 24.981 67.725 1.00 43.38 O
ATOM 9 C3' A A2734 39.865 27.305 67.606 1.00 43.89 C
ATOM 10 O3' A A2734 40.541 28.472 68.042 1.00 44.15 O
ATOM 11 C2' A A2734 40.370 26.772 66.272 1.00 43.73 C
ATOM 12 O2' A A2734 41.765 26.946 66.135 1.00 43.74 O
ATOM 13 C1' A A2734 40.075 25.295 66.378 1.00 43.41 C
ATOM 14 N9 A A2734 38.845 24.976 65.686 1.00 43.37 N
ATOM 15 C8 A A2734 37.590 25.080 66.175 1.00 43.44 C
ATOM 16 N7 A A2734 36.698 24.772 65.294 1.00 43.40 N
ATOM 17 C5 A A2734 37.431 24.466 64.157 1.00 43.30 C
ATOM 18 C6 A A2734 37.085 24.038 62.865 1.00 43.23 C
ATOM 19 N6 A A2734 35.826 23.863 62.462 1.00 43.25 N
ATOM 20 N1 A A2734 38.093 23.820 61.969 1.00 43.16 N
ATOM 21 C2 A A2734 39.354 24.007 62.355 1.00 43.15 C
ATOM 22 N3 A A2734 39.784 24.373 63.539 1.00 43.21 N
ATOM 23 C4 A A2734 38.771 24.610 64.385 1.00 43.29 C
ATOM 24 P C A2735 40.193 29.934 67.455 1.00 50.23 P
ATOM 25 OP1 C A2735 39.202 30.545 68.353 1.00 50.43 O
ATOM 26 OP2 C A2735 39.870 29.807 66.004 1.00 50.18 O
ATOM 27 O5' C A2735 41.528 30.687 67.609 1.00 50.39 O
TER
ATOM 1 O3' A B2698 31.652 24.096 64.733 1.00 39.94 O
ATOM 2 P G B2699 31.832 25.105 63.522 1.00 43.89 P
ATOM 3 OP1 G B2699 33.272 25.488 63.493 1.00 43.89 O
ATOM 4 OP2 G B2699 30.795 26.176 63.692 1.00 44.19 O
ATOM 5 O5' G B2699 31.482 24.222 62.243 1.00 43.74 O
ATOM 6 C5' G B2699 30.263 23.492 62.153 1.00 43.68 C
ATOM 7 C4' G B2699 29.078 24.397 62.088 1.00 43.95 C
ATOM 8 O4' G B2699 28.671 24.568 60.718 1.00 44.06 O
ATOM 9 C3' G B2699 27.812 23.905 62.746 1.00 43.94 C
ATOM 10 O3' G B2699 27.846 23.968 64.155 1.00 43.93 O
ATOM 11 C2' G B2699 26.801 24.839 62.137 1.00 44.23 C
ATOM 12 O2' G B2699 26.980 26.097 62.694 1.00 44.48 O
ATOM 13 C1' G B2699 27.297 24.922 60.695 1.00 44.24 C
ATOM 14 N9 G B2699 26.563 24.004 59.806 1.00 44.14 N
ATOM 15 C8 G B2699 27.058 23.011 59.029 1.00 43.93 C
ATOM 16 N7 G B2699 26.149 22.359 58.385 1.00 43.90 N
ATOM 17 C5 G B2699 24.957 22.931 58.775 1.00 44.11 C
ATOM 18 C6 G B2699 23.624 22.625 58.415 1.00 44.20 C
ATOM 19 O6 G B2699 23.225 21.758 57.639 1.00 44.11 O
ATOM 20 N1 G B2699 22.728 23.469 59.006 1.00 44.44 N
ATOM 21 C2 G B2699 23.046 24.475 59.865 1.00 44.58 C
ATOM 22 N2 G B2699 22.037 25.199 60.391 1.00 44.83 N
ATOM 23 N3 G B2699 24.286 24.771 60.230 1.00 44.51 N
ATOM 24 C4 G B2699 25.199 23.961 59.647 1.00 44.27 C
ATOM 25 P C B2700 26.943 22.948 65.029 1.00 38.98 P
ATOM 26 OP1 C B2700 27.510 22.902 66.401 1.00 38.92 O
ATOM 27 OP2 C B2700 26.845 21.697 64.263 1.00 38.74 O
ATOM 28 O5' C B2700 25.519 23.641 65.068 1.00 39.25 O
TER
Atoms:
OP1: (36.900,27.515,71.109)
OP2: (35.350,26.036,69.721)
C3': (39.865,27.305,67.606)
C1': (40.075,25.295,66.378)
C5': (39.187,26.072,69.710)
O4': (39.909,24.981,67.725)
C8: (37.590,25.080,66.175)
O2': (41.765,26.946,66.135)
C6: (37.085,24.038,62.865)
C5: (37.431,24.466,64.157)
C4: (38.771,24.610,64.385)
P: (36.668,26.243,70.362)
C4': (40.097,26.144,68.538)
C2': (40.370,26.772,66.272)
C2: (39.354,24.007,62.355)
N1: (38.093,23.820,61.969)
N3: (39.784,24.373,63.539)
N6: (35.826,23.863,62.462)
N7: (36.698,24.772,65.294)
N9: (38.845,24.976,65.686)
O5': (37.842,26.012,69.305)
O3': (40.541,28.472,68.042)
OP2: (35.350,26.036,69.721)
C3': (39.865,27.305,67.606)
C1': (40.075,25.295,66.378)
C5': (39.187,26.072,69.710)
O4': (39.909,24.981,67.725)
C8: (37.590,25.080,66.175)
O2': (41.765,26.946,66.135)
C6: (37.085,24.038,62.865)
C5: (37.431,24.466,64.157)
C4: (38.771,24.610,64.385)
P: (36.668,26.243,70.362)
C4': (40.097,26.144,68.538)
C2': (40.370,26.772,66.272)
C2: (39.354,24.007,62.355)
N1: (38.093,23.820,61.969)
N3: (39.784,24.373,63.539)
N6: (35.826,23.863,62.462)
N7: (36.698,24.772,65.294)
N9: (38.845,24.976,65.686)
O5': (37.842,26.012,69.305)
O3': (40.541,28.472,68.042)
OP1: (33.272,25.488,63.493)
OP2: (30.795,26.176,63.692)
C3': (27.812,23.905,62.746)
C1': (27.297,24.922,60.695)
C5': (30.263,23.492,62.153)
O6: (23.225,21.758,57.639)
O4': (28.671,24.568,60.718)
C8: (27.058,23.011,59.029)
C2: (23.046,24.475,59.865)
C6: (23.624,22.625,58.415)
C5: (24.957,22.931,58.775)
C4: (25.199,23.961,59.647)
P: (31.832,25.105,63.522)
C4': (29.078,24.397,62.088)
C2': (26.801,24.839,62.137)
O2': (26.980,26.097,62.694)
N1: (22.728,23.469,59.006)
N2: (22.037,25.199,60.391)
N3: (24.286,24.771,60.230)
N7: (26.149,22.359,58.385)
N9: (26.563,24.004,59.806)
O5': (31.482,24.222,62.243)
O3': (27.846,23.968,64.155)
OP2: (30.795,26.176,63.692)
C3': (27.812,23.905,62.746)
C1': (27.297,24.922,60.695)
C5': (30.263,23.492,62.153)
O6: (23.225,21.758,57.639)
O4': (28.671,24.568,60.718)
C8: (27.058,23.011,59.029)
C2: (23.046,24.475,59.865)
C6: (23.624,22.625,58.415)
C5: (24.957,22.931,58.775)
C4: (25.199,23.961,59.647)
P: (31.832,25.105,63.522)
C4': (29.078,24.397,62.088)
C2': (26.801,24.839,62.137)
O2': (26.980,26.097,62.694)
N1: (22.728,23.469,59.006)
N2: (22.037,25.199,60.391)
N3: (24.286,24.771,60.230)
N7: (26.149,22.359,58.385)
N9: (26.563,24.004,59.806)
O5': (31.482,24.222,62.243)
O3': (27.846,23.968,64.155)
Image (generated by PyMOL):