Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E85:E86
Extra
PDB:
ATOM 1 O3' G A 84 -19.596 29.095 127.127 1.00156.69 O
ATOM 2 P G A 85 -20.478 30.413 126.876 1.00156.75 P
ATOM 3 OP1 G A 85 -21.239 30.701 128.119 1.00158.46 O
ATOM 4 OP2 G A 85 -21.209 30.221 125.595 1.00148.53 O
ATOM 5 O5' G A 85 -19.408 31.576 126.659 1.00150.19 O
ATOM 6 C5' G A 85 -19.799 32.811 126.067 1.00142.51 C
ATOM 7 C4' G A 85 -18.854 33.925 126.463 1.00142.94 C
ATOM 8 O4' G A 85 -17.508 33.634 125.988 1.00137.51 O
ATOM 9 C3' G A 85 -19.214 35.264 125.836 1.00145.76 C
ATOM 10 O3' G A 85 -20.152 35.960 126.654 1.00153.01 O
ATOM 11 C2' G A 85 -17.860 35.955 125.737 1.00141.78 C
ATOM 12 O2' G A 85 -17.426 36.508 126.964 1.00134.48 O
ATOM 13 C1' G A 85 -16.965 34.779 125.346 1.00135.32 C
ATOM 14 N9 G A 85 -16.982 34.504 123.913 1.00131.15 N
ATOM 15 C8 G A 85 -17.473 33.364 123.324 1.00130.21 C
ATOM 16 N7 G A 85 -17.378 33.374 122.023 1.00129.48 N
ATOM 17 C5 G A 85 -16.786 34.593 121.729 1.00128.45 C
ATOM 18 C6 G A 85 -16.434 35.156 120.478 1.00126.72 C
ATOM 19 O6 G A 85 -16.579 34.672 119.347 1.00124.51 O
ATOM 20 N1 G A 85 -15.857 36.413 120.627 1.00125.78 N
ATOM 21 C2 G A 85 -15.643 37.049 121.826 1.00125.12 C
ATOM 22 N2 G A 85 -15.067 38.262 121.745 1.00121.37 N
ATOM 23 N3 G A 85 -15.967 36.533 123.009 1.00125.73 N
ATOM 24 C4 G A 85 -16.531 35.308 122.884 1.00128.97 C
ATOM 25 P U A 86 -21.438 36.660 125.982 1.00152.34 P
ATOM 26 OP1 U A 86 -22.562 36.601 126.952 1.00149.73 O
ATOM 27 OP2 U A 86 -21.615 36.089 124.622 1.00149.52 O
ATOM 28 O5' U A 86 -20.993 38.180 125.824 1.00151.96 O
TER
ATOM 1 O3' G B 85 -20.152 35.960 126.654 1.00153.01 O
ATOM 2 P U B 86 -21.438 36.660 125.982 1.00152.34 P
ATOM 3 OP1 U B 86 -22.562 36.601 126.952 1.00149.73 O
ATOM 4 OP2 U B 86 -21.615 36.089 124.622 1.00149.52 O
ATOM 5 O5' U B 86 -20.993 38.180 125.824 1.00151.96 O
ATOM 6 C5' U B 86 -21.569 39.007 124.825 1.00149.97 C
ATOM 7 C4' U B 86 -20.533 39.955 124.275 1.00151.97 C
ATOM 8 O4' U B 86 -19.373 39.201 123.833 1.00153.46 O
ATOM 9 C3' U B 86 -20.983 40.724 123.047 1.00154.59 C
ATOM 10 O3' U B 86 -21.698 41.892 123.421 1.00153.69 O
ATOM 11 C2' U B 86 -19.663 41.037 122.359 1.00156.69 C
ATOM 12 O2' U B 86 -18.990 42.139 122.934 1.00157.45 O
ATOM 13 C1' U B 86 -18.881 39.747 122.618 1.00157.42 C
ATOM 14 N1 U B 86 -19.075 38.743 121.562 1.00157.58 N
ATOM 15 C2 U B 86 -18.342 38.876 120.397 1.00157.37 C
ATOM 16 O2 U B 86 -17.544 39.782 120.217 1.00155.76 O
ATOM 17 N3 U B 86 -18.579 37.907 119.450 1.00157.42 N
ATOM 18 C4 U B 86 -19.456 36.842 119.552 1.00157.47 C
ATOM 19 O4 U B 86 -19.563 36.049 118.614 1.00157.48 O
ATOM 20 C5 U B 86 -20.172 36.776 120.788 1.00157.44 C
ATOM 21 C6 U B 86 -19.962 37.704 121.726 1.00157.42 C
ATOM 22 P G B 87 -23.004 42.315 122.592 1.00157.13 P
ATOM 23 OP1 G B 87 -23.683 43.423 123.312 1.00153.25 O
ATOM 24 OP2 G B 87 -23.753 41.068 122.287 1.00153.18 O
ATOM 25 O5' G B 87 -22.413 42.888 121.230 1.00162.89 O
TER
ATOM 2 P G A 85 -20.478 30.413 126.876 1.00156.75 P
ATOM 3 OP1 G A 85 -21.239 30.701 128.119 1.00158.46 O
ATOM 4 OP2 G A 85 -21.209 30.221 125.595 1.00148.53 O
ATOM 5 O5' G A 85 -19.408 31.576 126.659 1.00150.19 O
ATOM 6 C5' G A 85 -19.799 32.811 126.067 1.00142.51 C
ATOM 7 C4' G A 85 -18.854 33.925 126.463 1.00142.94 C
ATOM 8 O4' G A 85 -17.508 33.634 125.988 1.00137.51 O
ATOM 9 C3' G A 85 -19.214 35.264 125.836 1.00145.76 C
ATOM 10 O3' G A 85 -20.152 35.960 126.654 1.00153.01 O
ATOM 11 C2' G A 85 -17.860 35.955 125.737 1.00141.78 C
ATOM 12 O2' G A 85 -17.426 36.508 126.964 1.00134.48 O
ATOM 13 C1' G A 85 -16.965 34.779 125.346 1.00135.32 C
ATOM 14 N9 G A 85 -16.982 34.504 123.913 1.00131.15 N
ATOM 15 C8 G A 85 -17.473 33.364 123.324 1.00130.21 C
ATOM 16 N7 G A 85 -17.378 33.374 122.023 1.00129.48 N
ATOM 17 C5 G A 85 -16.786 34.593 121.729 1.00128.45 C
ATOM 18 C6 G A 85 -16.434 35.156 120.478 1.00126.72 C
ATOM 19 O6 G A 85 -16.579 34.672 119.347 1.00124.51 O
ATOM 20 N1 G A 85 -15.857 36.413 120.627 1.00125.78 N
ATOM 21 C2 G A 85 -15.643 37.049 121.826 1.00125.12 C
ATOM 22 N2 G A 85 -15.067 38.262 121.745 1.00121.37 N
ATOM 23 N3 G A 85 -15.967 36.533 123.009 1.00125.73 N
ATOM 24 C4 G A 85 -16.531 35.308 122.884 1.00128.97 C
ATOM 25 P U A 86 -21.438 36.660 125.982 1.00152.34 P
ATOM 26 OP1 U A 86 -22.562 36.601 126.952 1.00149.73 O
ATOM 27 OP2 U A 86 -21.615 36.089 124.622 1.00149.52 O
ATOM 28 O5' U A 86 -20.993 38.180 125.824 1.00151.96 O
TER
ATOM 1 O3' G B 85 -20.152 35.960 126.654 1.00153.01 O
ATOM 2 P U B 86 -21.438 36.660 125.982 1.00152.34 P
ATOM 3 OP1 U B 86 -22.562 36.601 126.952 1.00149.73 O
ATOM 4 OP2 U B 86 -21.615 36.089 124.622 1.00149.52 O
ATOM 5 O5' U B 86 -20.993 38.180 125.824 1.00151.96 O
ATOM 6 C5' U B 86 -21.569 39.007 124.825 1.00149.97 C
ATOM 7 C4' U B 86 -20.533 39.955 124.275 1.00151.97 C
ATOM 8 O4' U B 86 -19.373 39.201 123.833 1.00153.46 O
ATOM 9 C3' U B 86 -20.983 40.724 123.047 1.00154.59 C
ATOM 10 O3' U B 86 -21.698 41.892 123.421 1.00153.69 O
ATOM 11 C2' U B 86 -19.663 41.037 122.359 1.00156.69 C
ATOM 12 O2' U B 86 -18.990 42.139 122.934 1.00157.45 O
ATOM 13 C1' U B 86 -18.881 39.747 122.618 1.00157.42 C
ATOM 14 N1 U B 86 -19.075 38.743 121.562 1.00157.58 N
ATOM 15 C2 U B 86 -18.342 38.876 120.397 1.00157.37 C
ATOM 16 O2 U B 86 -17.544 39.782 120.217 1.00155.76 O
ATOM 17 N3 U B 86 -18.579 37.907 119.450 1.00157.42 N
ATOM 18 C4 U B 86 -19.456 36.842 119.552 1.00157.47 C
ATOM 19 O4 U B 86 -19.563 36.049 118.614 1.00157.48 O
ATOM 20 C5 U B 86 -20.172 36.776 120.788 1.00157.44 C
ATOM 21 C6 U B 86 -19.962 37.704 121.726 1.00157.42 C
ATOM 22 P G B 87 -23.004 42.315 122.592 1.00157.13 P
ATOM 23 OP1 G B 87 -23.683 43.423 123.312 1.00153.25 O
ATOM 24 OP2 G B 87 -23.753 41.068 122.287 1.00153.18 O
ATOM 25 O5' G B 87 -22.413 42.888 121.230 1.00162.89 O
TER
Atoms:
OP1: (-21.239,30.701,128.119)
OP2: (-21.209,30.221,125.595)
C3': (-19.214,35.264,125.836)
C1': (-16.965,34.779,125.346)
C5': (-19.799,32.811,126.067)
O6: (-16.579,34.672,119.347)
O4': (-17.508,33.634,125.988)
C8: (-17.473,33.364,123.324)
C2: (-15.643,37.049,121.826)
C6: (-16.434,35.156,120.478)
C5: (-16.786,34.593,121.729)
C4: (-16.531,35.308,122.884)
P: (-20.478,30.413,126.876)
C4': (-18.854,33.925,126.463)
C2': (-17.860,35.955,125.737)
O2': (-17.426,36.508,126.964)
N1: (-15.857,36.413,120.627)
N2: (-15.067,38.262,121.745)
N3: (-15.967,36.533,123.009)
N7: (-17.378,33.374,122.023)
N9: (-16.982,34.504,123.913)
O5': (-19.408,31.576,126.659)
O3': (-20.152,35.960,126.654)
OP2: (-21.209,30.221,125.595)
C3': (-19.214,35.264,125.836)
C1': (-16.965,34.779,125.346)
C5': (-19.799,32.811,126.067)
O6: (-16.579,34.672,119.347)
O4': (-17.508,33.634,125.988)
C8: (-17.473,33.364,123.324)
C2: (-15.643,37.049,121.826)
C6: (-16.434,35.156,120.478)
C5: (-16.786,34.593,121.729)
C4: (-16.531,35.308,122.884)
P: (-20.478,30.413,126.876)
C4': (-18.854,33.925,126.463)
C2': (-17.860,35.955,125.737)
O2': (-17.426,36.508,126.964)
N1: (-15.857,36.413,120.627)
N2: (-15.067,38.262,121.745)
N3: (-15.967,36.533,123.009)
N7: (-17.378,33.374,122.023)
N9: (-16.982,34.504,123.913)
O5': (-19.408,31.576,126.659)
O3': (-20.152,35.960,126.654)
C4: (-19.456,36.842,119.552)
N3: (-18.579,37.907,119.450)
OP1: (-22.562,36.601,126.952)
OP2: (-21.615,36.089,124.622)
C2: (-18.342,38.876,120.397)
C1': (-18.881,39.747,122.618)
C3': (-20.983,40.724,123.047)
O5': (-20.993,38.180,125.824)
O4': (-19.373,39.201,123.833)
C5': (-21.569,39.007,124.825)
P: (-21.438,36.660,125.982)
C4': (-20.533,39.955,124.275)
C2': (-19.663,41.037,122.359)
O2': (-18.990,42.139,122.934)
N1: (-19.075,38.743,121.562)
O4: (-19.563,36.049,118.614)
O2: (-17.544,39.782,120.217)
C6: (-19.962,37.704,121.726)
C5: (-20.172,36.776,120.788)
O3': (-21.698,41.892,123.421)
N3: (-18.579,37.907,119.450)
OP1: (-22.562,36.601,126.952)
OP2: (-21.615,36.089,124.622)
C2: (-18.342,38.876,120.397)
C1': (-18.881,39.747,122.618)
C3': (-20.983,40.724,123.047)
O5': (-20.993,38.180,125.824)
O4': (-19.373,39.201,123.833)
C5': (-21.569,39.007,124.825)
P: (-21.438,36.660,125.982)
C4': (-20.533,39.955,124.275)
C2': (-19.663,41.037,122.359)
O2': (-18.990,42.139,122.934)
N1: (-19.075,38.743,121.562)
O4: (-19.563,36.049,118.614)
O2: (-17.544,39.782,120.217)
C6: (-19.962,37.704,121.726)
C5: (-20.172,36.776,120.788)
O3': (-21.698,41.892,123.421)
Image (generated by PyMOL):