Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VFG:C9:C8
Extra
PDB:
ATOM 1 O3' G A 8 6.334 -40.721 -5.323 1.00137.12 O
ATOM 2 P C A 9 6.846 -41.708 -6.479 1.00136.98 P
ATOM 3 OP1 C A 9 5.729 -42.600 -6.865 1.00137.48 O
ATOM 4 OP2 C A 9 8.121 -42.295 -5.999 1.00137.21 O
ATOM 5 O5' C A 9 7.174 -40.725 -7.685 1.00136.43 O
ATOM 6 C5' C A 9 6.291 -39.662 -7.992 1.00135.77 C
ATOM 7 C4' C A 9 7.061 -38.386 -8.160 1.00135.94 C
ATOM 8 O4' C A 9 7.753 -38.078 -6.918 1.00135.25 O
ATOM 9 C3' C A 9 8.196 -38.495 -9.154 1.00136.62 C
ATOM 10 O3' C A 9 7.775 -38.328 -10.493 1.00139.40 O
ATOM 11 C2' C A 9 9.104 -37.360 -8.725 1.00136.04 C
ATOM 12 O2' C A 9 8.592 -36.116 -9.162 1.00135.19 O
ATOM 13 C1' C A 9 8.996 -37.451 -7.206 1.00135.42 C
ATOM 14 N1 C A 9 10.097 -38.237 -6.616 1.00134.91 N
ATOM 15 C2 C A 9 11.329 -37.599 -6.369 1.00134.76 C
ATOM 16 O2 C A 9 11.465 -36.399 -6.667 1.00135.07 O
ATOM 17 N3 C A 9 12.340 -38.303 -5.813 1.00134.59 N
ATOM 18 C4 C A 9 12.163 -39.588 -5.498 1.00134.23 C
ATOM 19 N4 C A 9 13.184 -40.233 -4.923 1.00133.53 N
ATOM 20 C5 C A 9 10.930 -40.265 -5.752 1.00134.24 C
ATOM 21 C6 C A 9 9.937 -39.560 -6.310 1.00134.46 C
ATOM 22 P G A 10 8.752 -38.796 -11.673 1.00141.55 P
ATOM 23 OP1 G A 10 8.324 -38.159 -12.950 1.00140.71 O
ATOM 24 OP2 G A 10 8.824 -40.276 -11.573 1.00141.50 O
ATOM 25 O5' G A 10 10.167 -38.197 -11.238 1.00142.88 O
TER
ATOM 1 O3' G B 7 5.962 -43.914 -0.337 1.00137.91 O
ATOM 2 P G B 8 6.474 -44.195 -1.829 1.00138.59 P
ATOM 3 OP1 G B 8 5.390 -44.796 -2.648 1.00138.59 O
ATOM 4 OP2 G B 8 7.778 -44.892 -1.712 1.00138.70 O
ATOM 5 O5' G B 8 6.745 -42.735 -2.386 1.00137.74 O
ATOM 6 C5' G B 8 5.697 -41.788 -2.427 1.00137.06 C
ATOM 7 C4' G B 8 6.223 -40.465 -2.894 1.00136.98 C
ATOM 8 O4' G B 8 7.165 -39.959 -1.909 1.00136.75 O
ATOM 9 C3' G B 8 7.092 -40.601 -4.132 1.00136.85 C
ATOM 10 O3' G B 8 6.334 -40.721 -5.323 1.00137.12 O
ATOM 11 C2' G B 8 7.943 -39.343 -4.076 1.00136.62 C
ATOM 12 O2' G B 8 7.305 -38.191 -4.598 1.00136.02 O
ATOM 13 C1' G B 8 8.168 -39.208 -2.572 1.00136.34 C
ATOM 14 N9 G B 8 9.490 -39.648 -2.148 1.00135.52 N
ATOM 15 C8 G B 8 9.848 -40.766 -1.440 1.00135.30 C
ATOM 16 N7 G B 8 11.133 -40.833 -1.211 1.00135.54 N
ATOM 17 C5 G B 8 11.644 -39.694 -1.816 1.00135.85 C
ATOM 18 C6 G B 8 12.980 -39.201 -1.904 1.00136.55 C
ATOM 19 O6 G B 8 14.025 -39.683 -1.435 1.00137.19 O
ATOM 20 N1 G B 8 13.032 -38.009 -2.622 1.00136.95 N
ATOM 21 C2 G B 8 11.949 -37.370 -3.175 1.00136.68 C
ATOM 22 N2 G B 8 12.186 -36.235 -3.846 1.00136.83 N
ATOM 23 N3 G B 8 10.715 -37.811 -3.086 1.00136.17 N
ATOM 24 C4 G B 8 10.638 -38.964 -2.402 1.00135.64 C
ATOM 25 P C B 9 6.846 -41.708 -6.479 1.00136.98 P
ATOM 26 OP1 C B 9 5.729 -42.600 -6.865 1.00137.48 O
ATOM 27 OP2 C B 9 8.121 -42.295 -5.999 1.00137.21 O
ATOM 28 O5' C B 9 7.174 -40.725 -7.685 1.00136.43 O
TER
ATOM 2 P C A 9 6.846 -41.708 -6.479 1.00136.98 P
ATOM 3 OP1 C A 9 5.729 -42.600 -6.865 1.00137.48 O
ATOM 4 OP2 C A 9 8.121 -42.295 -5.999 1.00137.21 O
ATOM 5 O5' C A 9 7.174 -40.725 -7.685 1.00136.43 O
ATOM 6 C5' C A 9 6.291 -39.662 -7.992 1.00135.77 C
ATOM 7 C4' C A 9 7.061 -38.386 -8.160 1.00135.94 C
ATOM 8 O4' C A 9 7.753 -38.078 -6.918 1.00135.25 O
ATOM 9 C3' C A 9 8.196 -38.495 -9.154 1.00136.62 C
ATOM 10 O3' C A 9 7.775 -38.328 -10.493 1.00139.40 O
ATOM 11 C2' C A 9 9.104 -37.360 -8.725 1.00136.04 C
ATOM 12 O2' C A 9 8.592 -36.116 -9.162 1.00135.19 O
ATOM 13 C1' C A 9 8.996 -37.451 -7.206 1.00135.42 C
ATOM 14 N1 C A 9 10.097 -38.237 -6.616 1.00134.91 N
ATOM 15 C2 C A 9 11.329 -37.599 -6.369 1.00134.76 C
ATOM 16 O2 C A 9 11.465 -36.399 -6.667 1.00135.07 O
ATOM 17 N3 C A 9 12.340 -38.303 -5.813 1.00134.59 N
ATOM 18 C4 C A 9 12.163 -39.588 -5.498 1.00134.23 C
ATOM 19 N4 C A 9 13.184 -40.233 -4.923 1.00133.53 N
ATOM 20 C5 C A 9 10.930 -40.265 -5.752 1.00134.24 C
ATOM 21 C6 C A 9 9.937 -39.560 -6.310 1.00134.46 C
ATOM 22 P G A 10 8.752 -38.796 -11.673 1.00141.55 P
ATOM 23 OP1 G A 10 8.324 -38.159 -12.950 1.00140.71 O
ATOM 24 OP2 G A 10 8.824 -40.276 -11.573 1.00141.50 O
ATOM 25 O5' G A 10 10.167 -38.197 -11.238 1.00142.88 O
TER
ATOM 1 O3' G B 7 5.962 -43.914 -0.337 1.00137.91 O
ATOM 2 P G B 8 6.474 -44.195 -1.829 1.00138.59 P
ATOM 3 OP1 G B 8 5.390 -44.796 -2.648 1.00138.59 O
ATOM 4 OP2 G B 8 7.778 -44.892 -1.712 1.00138.70 O
ATOM 5 O5' G B 8 6.745 -42.735 -2.386 1.00137.74 O
ATOM 6 C5' G B 8 5.697 -41.788 -2.427 1.00137.06 C
ATOM 7 C4' G B 8 6.223 -40.465 -2.894 1.00136.98 C
ATOM 8 O4' G B 8 7.165 -39.959 -1.909 1.00136.75 O
ATOM 9 C3' G B 8 7.092 -40.601 -4.132 1.00136.85 C
ATOM 10 O3' G B 8 6.334 -40.721 -5.323 1.00137.12 O
ATOM 11 C2' G B 8 7.943 -39.343 -4.076 1.00136.62 C
ATOM 12 O2' G B 8 7.305 -38.191 -4.598 1.00136.02 O
ATOM 13 C1' G B 8 8.168 -39.208 -2.572 1.00136.34 C
ATOM 14 N9 G B 8 9.490 -39.648 -2.148 1.00135.52 N
ATOM 15 C8 G B 8 9.848 -40.766 -1.440 1.00135.30 C
ATOM 16 N7 G B 8 11.133 -40.833 -1.211 1.00135.54 N
ATOM 17 C5 G B 8 11.644 -39.694 -1.816 1.00135.85 C
ATOM 18 C6 G B 8 12.980 -39.201 -1.904 1.00136.55 C
ATOM 19 O6 G B 8 14.025 -39.683 -1.435 1.00137.19 O
ATOM 20 N1 G B 8 13.032 -38.009 -2.622 1.00136.95 N
ATOM 21 C2 G B 8 11.949 -37.370 -3.175 1.00136.68 C
ATOM 22 N2 G B 8 12.186 -36.235 -3.846 1.00136.83 N
ATOM 23 N3 G B 8 10.715 -37.811 -3.086 1.00136.17 N
ATOM 24 C4 G B 8 10.638 -38.964 -2.402 1.00135.64 C
ATOM 25 P C B 9 6.846 -41.708 -6.479 1.00136.98 P
ATOM 26 OP1 C B 9 5.729 -42.600 -6.865 1.00137.48 O
ATOM 27 OP2 C B 9 8.121 -42.295 -5.999 1.00137.21 O
ATOM 28 O5' C B 9 7.174 -40.725 -7.685 1.00136.43 O
TER
Atoms:
C2: (11.329,-37.599,-6.369)
OP1: (5.729,-42.600,-6.865)
OP2: (8.121,-42.295,-5.999)
C4: (12.163,-39.588,-5.498)
O5': (7.174,-40.725,-7.685)
C3': (8.196,-38.495,-9.154)
C1': (8.996,-37.451,-7.206)
O4': (7.753,-38.078,-6.918)
C5': (6.291,-39.662,-7.992)
P: (6.846,-41.708,-6.479)
O2: (11.465,-36.399,-6.667)
C4': (7.061,-38.386,-8.160)
C2': (9.104,-37.360,-8.725)
O2': (8.592,-36.116,-9.162)
N1: (10.097,-38.237,-6.616)
N3: (12.340,-38.303,-5.813)
N4: (13.184,-40.233,-4.923)
C6: (9.937,-39.560,-6.310)
C5: (10.930,-40.265,-5.752)
O3': (7.775,-38.328,-10.493)
OP1: (5.729,-42.600,-6.865)
OP2: (8.121,-42.295,-5.999)
C4: (12.163,-39.588,-5.498)
O5': (7.174,-40.725,-7.685)
C3': (8.196,-38.495,-9.154)
C1': (8.996,-37.451,-7.206)
O4': (7.753,-38.078,-6.918)
C5': (6.291,-39.662,-7.992)
P: (6.846,-41.708,-6.479)
O2: (11.465,-36.399,-6.667)
C4': (7.061,-38.386,-8.160)
C2': (9.104,-37.360,-8.725)
O2': (8.592,-36.116,-9.162)
N1: (10.097,-38.237,-6.616)
N3: (12.340,-38.303,-5.813)
N4: (13.184,-40.233,-4.923)
C6: (9.937,-39.560,-6.310)
C5: (10.930,-40.265,-5.752)
O3': (7.775,-38.328,-10.493)
OP1: (5.390,-44.796,-2.648)
OP2: (7.778,-44.892,-1.712)
C3': (7.092,-40.601,-4.132)
C1': (8.168,-39.208,-2.572)
C5': (5.697,-41.788,-2.427)
O6: (14.025,-39.683,-1.435)
O4': (7.165,-39.959,-1.909)
C8: (9.848,-40.766,-1.440)
C2: (11.949,-37.370,-3.175)
C6: (12.980,-39.201,-1.904)
C5: (11.644,-39.694,-1.816)
C4: (10.638,-38.964,-2.402)
P: (6.474,-44.195,-1.829)
C4': (6.223,-40.465,-2.894)
C2': (7.943,-39.343,-4.076)
O2': (7.305,-38.191,-4.598)
N1: (13.032,-38.009,-2.622)
N2: (12.186,-36.235,-3.846)
N3: (10.715,-37.811,-3.086)
N7: (11.133,-40.833,-1.211)
N9: (9.490,-39.648,-2.148)
O5': (6.745,-42.735,-2.386)
O3': (6.334,-40.721,-5.323)
OP2: (7.778,-44.892,-1.712)
C3': (7.092,-40.601,-4.132)
C1': (8.168,-39.208,-2.572)
C5': (5.697,-41.788,-2.427)
O6: (14.025,-39.683,-1.435)
O4': (7.165,-39.959,-1.909)
C8: (9.848,-40.766,-1.440)
C2: (11.949,-37.370,-3.175)
C6: (12.980,-39.201,-1.904)
C5: (11.644,-39.694,-1.816)
C4: (10.638,-38.964,-2.402)
P: (6.474,-44.195,-1.829)
C4': (6.223,-40.465,-2.894)
C2': (7.943,-39.343,-4.076)
O2': (7.305,-38.191,-4.598)
N1: (13.032,-38.009,-2.622)
N2: (12.186,-36.235,-3.846)
N3: (10.715,-37.811,-3.086)
N7: (11.133,-40.833,-1.211)
N9: (9.490,-39.648,-2.148)
O5': (6.745,-42.735,-2.386)
O3': (6.334,-40.721,-5.323)
Image (generated by PyMOL):