ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NUF:C12:C11

Extra

PDB:
ATOM 1 O3' G A 11 4.278 19.602 -5.588 1.00 66.24 O
ATOM 2 P C A 12 4.032 20.947 -6.435 1.00 75.58 P
ATOM 3 OP1 C A 12 5.329 21.244 -7.088 1.00 78.70 O
ATOM 4 OP2 C A 12 3.389 21.980 -5.572 1.00 70.12 O
ATOM 5 O5' C A 12 3.006 20.535 -7.584 1.00 71.79 O
ATOM 6 C5' C A 12 1.896 19.687 -7.317 1.00 70.25 C
ATOM 7 C4' C A 12 1.432 19.031 -8.592 1.00 64.32 C
ATOM 8 O4' C A 12 2.590 18.745 -9.409 1.00 65.20 O
ATOM 9 C3' C A 12 0.734 17.698 -8.386 1.00 69.28 C
ATOM 10 O3' C A 12 -0.671 17.869 -8.242 1.00 74.25 O
ATOM 11 C2' C A 12 1.070 16.946 -9.662 1.00 67.08 C
ATOM 12 O2' C A 12 0.218 17.316 -10.720 1.00 70.18 O
ATOM 13 C1' C A 12 2.488 17.443 -9.945 1.00 65.70 C
ATOM 14 N1 C A 12 3.574 16.628 -9.366 1.00 68.57 N
ATOM 15 C2 C A 12 3.777 15.328 -9.843 1.00 67.46 C
ATOM 16 O2 C A 12 3.029 14.889 -10.728 1.00 70.92 O
ATOM 17 N3 C A 12 4.787 14.588 -9.332 1.00 69.27 N
ATOM 18 C4 C A 12 5.583 15.103 -8.390 1.00 69.66 C
ATOM 19 N4 C A 12 6.584 14.344 -7.934 1.00 72.73 N
ATOM 20 C5 C A 12 5.393 16.419 -7.879 1.00 66.14 C
ATOM 21 C6 C A 12 4.385 17.138 -8.387 1.00 67.36 C
ATOM 22 P A A 13 -1.391 17.408 -6.884 1.00 78.69 P
ATOM 23 OP1 A A 13 -2.791 17.904 -6.901 1.00 78.86 O
ATOM 24 OP2 A A 13 -0.482 17.817 -5.779 1.00 75.61 O
ATOM 25 O5' A A 13 -1.415 15.813 -6.963 1.00 81.85 O
TER

ATOM 1 O3' C B 10 4.033 22.863 -0.249 1.00 66.49 O
ATOM 2 P G B 11 3.719 23.126 -1.798 1.00 66.29 P
ATOM 3 OP1 G B 11 4.925 23.797 -2.330 1.00 68.63 O
ATOM 4 OP2 G B 11 2.392 23.788 -1.919 1.00 70.96 O
ATOM 5 O5' G B 11 3.611 21.667 -2.433 1.00 63.06 O
ATOM 6 C5' G B 11 4.788 20.914 -2.691 1.00 62.94 C
ATOM 7 C4' G B 11 4.450 19.518 -3.167 1.00 62.55 C
ATOM 8 O4' G B 11 3.720 18.800 -2.137 1.00 63.30 O
ATOM 9 C3' G B 11 3.556 19.389 -4.385 1.00 63.54 C
ATOM 10 O3' G B 11 4.278 19.602 -5.588 1.00 66.24 O
ATOM 11 C2' G B 11 3.096 17.944 -4.257 1.00 60.57 C
ATOM 12 O2' G B 11 4.065 17.011 -4.682 1.00 59.74 O
ATOM 13 C1' G B 11 2.873 17.839 -2.746 1.00 58.25 C
ATOM 14 N9 G B 11 1.492 18.199 -2.463 1.00 52.41 N
ATOM 15 C8 G B 11 1.004 19.429 -2.095 1.00 50.64 C
ATOM 16 N7 G B 11 -0.301 19.470 -2.061 1.00 51.93 N
ATOM 17 C5 G B 11 -0.691 18.180 -2.406 1.00 54.18 C
ATOM 18 C6 G B 11 -1.986 17.621 -2.582 1.00 51.04 C
ATOM 19 O6 G B 11 -3.085 18.184 -2.519 1.00 59.58 O
ATOM 20 N1 G B 11 -1.921 16.266 -2.886 1.00 46.47 N
ATOM 21 C2 G B 11 -0.762 15.543 -3.034 1.00 54.44 C
ATOM 22 N2 G B 11 -0.901 14.229 -3.304 1.00 56.60 N
ATOM 23 N3 G B 11 0.448 16.062 -2.918 1.00 55.87 N
ATOM 24 C4 G B 11 0.407 17.375 -2.604 1.00 53.30 C
ATOM 25 P C B 12 4.032 20.947 -6.435 1.00 75.58 P
ATOM 26 OP1 C B 12 5.329 21.244 -7.088 1.00 78.70 O
ATOM 27 OP2 C B 12 3.389 21.980 -5.572 1.00 70.12 O
ATOM 28 O5' C B 12 3.006 20.535 -7.584 1.00 71.79 O
TER

Atoms:
C2: (3.777,15.328,-9.843)
OP1: (5.329,21.244,-7.088)
OP2: (3.389,21.980,-5.572)
C4: (5.583,15.103,-8.390)
O5': (3.006,20.535,-7.584)
C3': (0.734,17.698,-8.386)
C1': (2.488,17.443,-9.945)
O4': (2.590,18.745,-9.409)
C5': (1.896,19.687,-7.317)
P: (4.032,20.947,-6.435)
O2: (3.029,14.889,-10.728)
C4': (1.432,19.031,-8.592)
C2': (1.070,16.946,-9.662)
O2': (0.218,17.316,-10.720)
N1: (3.574,16.628,-9.366)
N3: (4.787,14.588,-9.332)
N4: (6.584,14.344,-7.934)
C6: (4.385,17.138,-8.387)
C5: (5.393,16.419,-7.879)
O3': (-0.671,17.869,-8.242)
OP1: (4.925,23.797,-2.330)
OP2: (2.392,23.788,-1.919)
C3': (3.556,19.389,-4.385)
C1': (2.873,17.839,-2.746)
C5': (4.788,20.914,-2.691)
O6: (-3.085,18.184,-2.519)
O4': (3.720,18.800,-2.137)
C8: (1.004,19.429,-2.095)
C2: (-0.762,15.543,-3.034)
C6: (-1.986,17.621,-2.582)
C5: (-0.691,18.180,-2.406)
C4: (0.407,17.375,-2.604)
P: (3.719,23.126,-1.798)
C4': (4.450,19.518,-3.167)
C2': (3.096,17.944,-4.257)
O2': (4.065,17.011,-4.682)
N1: (-1.921,16.266,-2.886)
N2: (-0.901,14.229,-3.304)
N3: (0.448,16.062,-2.918)
N7: (-0.301,19.470,-2.061)
N9: (1.492,18.199,-2.463)
O5': (3.611,21.667,-2.433)
O3': (4.278,19.602,-5.588)
Image (generated by PyMOL):
PyMOL image
show in jmol