Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9109:9110
Extra
PDB:
ATOM 1 O3' G A 108 45.226 40.118 128.860 1.00 79.96 O
ATOM 2 P G A 109 45.690 38.875 127.948 1.00 79.97 P
ATOM 3 OP1 G A 109 45.168 37.649 128.603 1.00 80.73 O
ATOM 4 OP2 G A 109 47.141 38.984 127.629 1.00 77.17 O
ATOM 5 O5' G A 109 44.865 39.076 126.607 1.00 77.01 O
ATOM 6 C5' G A 109 45.185 38.343 125.432 1.00 74.08 C
ATOM 7 C4' G A 109 44.125 38.573 124.395 1.00 73.28 C
ATOM 8 O4' G A 109 43.902 39.998 124.233 1.00 73.28 O
ATOM 9 C3' G A 109 44.507 38.088 123.017 1.00 72.35 C
ATOM 10 O3' G A 109 44.259 36.708 122.874 1.00 71.85 O
ATOM 11 C2' G A 109 43.666 38.972 122.114 1.00 72.40 C
ATOM 12 O2' G A 109 42.319 38.561 122.036 1.00 72.17 O
ATOM 13 C1' G A 109 43.769 40.308 122.854 1.00 73.42 C
ATOM 14 N9 G A 109 44.960 41.050 122.451 1.00 74.04 N
ATOM 15 C8 G A 109 46.028 41.404 123.243 1.00 74.16 C
ATOM 16 N7 G A 109 46.968 42.027 122.588 1.00 74.92 N
ATOM 17 C5 G A 109 46.489 42.100 121.287 1.00 74.38 C
ATOM 18 C6 G A 109 47.076 42.655 120.125 1.00 74.10 C
ATOM 19 O6 G A 109 48.176 43.209 120.006 1.00 74.30 O
ATOM 20 N1 G A 109 46.248 42.510 119.018 1.00 74.41 N
ATOM 21 C2 G A 109 45.014 41.906 119.025 1.00 74.85 C
ATOM 22 N2 G A 109 44.362 41.863 117.851 1.00 74.63 N
ATOM 23 N3 G A 109 44.458 41.382 120.102 1.00 75.03 N
ATOM 24 C4 G A 109 45.247 41.512 121.189 1.00 74.33 C
ATOM 25 P U A 110 45.384 35.782 122.221 1.00 72.39 P
ATOM 26 OP1 U A 110 44.886 34.384 122.207 1.00 72.62 O
ATOM 27 OP2 U A 110 46.670 36.104 122.906 1.00 70.81 O
ATOM 28 O5' U A 110 45.434 36.293 120.713 1.00 70.92 O
TER
ATOM 1 O3' G B 109 44.259 36.708 122.874 1.00 71.85 O
ATOM 2 P U B 110 45.384 35.782 122.221 1.00 72.39 P
ATOM 3 OP1 U B 110 44.886 34.384 122.207 1.00 72.62 O
ATOM 4 OP2 U B 110 46.670 36.104 122.906 1.00 70.81 O
ATOM 5 O5' U B 110 45.434 36.293 120.713 1.00 70.92 O
ATOM 6 C5' U B 110 44.218 36.473 119.960 1.00 68.49 C
ATOM 7 C4' U B 110 44.512 37.142 118.640 1.00 67.32 C
ATOM 8 O4' U B 110 44.926 38.517 118.841 1.00 67.32 O
ATOM 9 C3' U B 110 45.647 36.518 117.858 1.00 65.44 C
ATOM 10 O3' U B 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 11 C2' U B 110 46.088 37.658 116.951 1.00 65.62 C
ATOM 12 O2' U B 110 45.241 37.817 115.832 1.00 65.34 O
ATOM 13 C1' U B 110 45.902 38.866 117.872 1.00 66.08 C
ATOM 14 N1 U B 110 47.115 39.331 118.568 1.00 65.83 N
ATOM 15 C2 U B 110 48.073 40.018 117.830 1.00 66.48 C
ATOM 16 O2 U B 110 47.988 40.195 116.622 1.00 67.71 O
ATOM 17 N3 U B 110 49.140 40.485 118.558 1.00 65.79 N
ATOM 18 C4 U B 110 49.354 40.330 119.911 1.00 65.40 C
ATOM 19 O4 U B 110 50.311 40.897 120.441 1.00 65.30 O
ATOM 20 C5 U B 110 48.348 39.577 120.590 1.00 65.76 C
ATOM 21 C6 U B 110 47.291 39.116 119.915 1.00 64.86 C
ATOM 22 P U B 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 23 OP1 U B 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 24 OP2 U B 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 25 O5' U B 111 47.360 34.750 116.107 1.00 64.25 O
TER
ATOM 2 P G A 109 45.690 38.875 127.948 1.00 79.97 P
ATOM 3 OP1 G A 109 45.168 37.649 128.603 1.00 80.73 O
ATOM 4 OP2 G A 109 47.141 38.984 127.629 1.00 77.17 O
ATOM 5 O5' G A 109 44.865 39.076 126.607 1.00 77.01 O
ATOM 6 C5' G A 109 45.185 38.343 125.432 1.00 74.08 C
ATOM 7 C4' G A 109 44.125 38.573 124.395 1.00 73.28 C
ATOM 8 O4' G A 109 43.902 39.998 124.233 1.00 73.28 O
ATOM 9 C3' G A 109 44.507 38.088 123.017 1.00 72.35 C
ATOM 10 O3' G A 109 44.259 36.708 122.874 1.00 71.85 O
ATOM 11 C2' G A 109 43.666 38.972 122.114 1.00 72.40 C
ATOM 12 O2' G A 109 42.319 38.561 122.036 1.00 72.17 O
ATOM 13 C1' G A 109 43.769 40.308 122.854 1.00 73.42 C
ATOM 14 N9 G A 109 44.960 41.050 122.451 1.00 74.04 N
ATOM 15 C8 G A 109 46.028 41.404 123.243 1.00 74.16 C
ATOM 16 N7 G A 109 46.968 42.027 122.588 1.00 74.92 N
ATOM 17 C5 G A 109 46.489 42.100 121.287 1.00 74.38 C
ATOM 18 C6 G A 109 47.076 42.655 120.125 1.00 74.10 C
ATOM 19 O6 G A 109 48.176 43.209 120.006 1.00 74.30 O
ATOM 20 N1 G A 109 46.248 42.510 119.018 1.00 74.41 N
ATOM 21 C2 G A 109 45.014 41.906 119.025 1.00 74.85 C
ATOM 22 N2 G A 109 44.362 41.863 117.851 1.00 74.63 N
ATOM 23 N3 G A 109 44.458 41.382 120.102 1.00 75.03 N
ATOM 24 C4 G A 109 45.247 41.512 121.189 1.00 74.33 C
ATOM 25 P U A 110 45.384 35.782 122.221 1.00 72.39 P
ATOM 26 OP1 U A 110 44.886 34.384 122.207 1.00 72.62 O
ATOM 27 OP2 U A 110 46.670 36.104 122.906 1.00 70.81 O
ATOM 28 O5' U A 110 45.434 36.293 120.713 1.00 70.92 O
TER
ATOM 1 O3' G B 109 44.259 36.708 122.874 1.00 71.85 O
ATOM 2 P U B 110 45.384 35.782 122.221 1.00 72.39 P
ATOM 3 OP1 U B 110 44.886 34.384 122.207 1.00 72.62 O
ATOM 4 OP2 U B 110 46.670 36.104 122.906 1.00 70.81 O
ATOM 5 O5' U B 110 45.434 36.293 120.713 1.00 70.92 O
ATOM 6 C5' U B 110 44.218 36.473 119.960 1.00 68.49 C
ATOM 7 C4' U B 110 44.512 37.142 118.640 1.00 67.32 C
ATOM 8 O4' U B 110 44.926 38.517 118.841 1.00 67.32 O
ATOM 9 C3' U B 110 45.647 36.518 117.858 1.00 65.44 C
ATOM 10 O3' U B 110 45.167 35.401 117.138 1.00 64.26 O
ATOM 11 C2' U B 110 46.088 37.658 116.951 1.00 65.62 C
ATOM 12 O2' U B 110 45.241 37.817 115.832 1.00 65.34 O
ATOM 13 C1' U B 110 45.902 38.866 117.872 1.00 66.08 C
ATOM 14 N1 U B 110 47.115 39.331 118.568 1.00 65.83 N
ATOM 15 C2 U B 110 48.073 40.018 117.830 1.00 66.48 C
ATOM 16 O2 U B 110 47.988 40.195 116.622 1.00 67.71 O
ATOM 17 N3 U B 110 49.140 40.485 118.558 1.00 65.79 N
ATOM 18 C4 U B 110 49.354 40.330 119.911 1.00 65.40 C
ATOM 19 O4 U B 110 50.311 40.897 120.441 1.00 65.30 O
ATOM 20 C5 U B 110 48.348 39.577 120.590 1.00 65.76 C
ATOM 21 C6 U B 110 47.291 39.116 119.915 1.00 64.86 C
ATOM 22 P U B 111 46.122 34.142 116.901 1.00 64.53 P
ATOM 23 OP1 U B 111 45.388 33.207 116.000 1.00 62.58 O
ATOM 24 OP2 U B 111 46.618 33.672 118.221 1.00 63.44 O
ATOM 25 O5' U B 111 47.360 34.750 116.107 1.00 64.25 O
TER
Atoms:
OP1: (45.168,37.649,128.603)
OP2: (47.141,38.984,127.629)
C3': (44.507,38.088,123.017)
C1': (43.769,40.308,122.854)
C5': (45.185,38.343,125.432)
O6: (48.176,43.209,120.006)
O4': (43.902,39.998,124.233)
C8: (46.028,41.404,123.243)
C2: (45.014,41.906,119.025)
C6: (47.076,42.655,120.125)
C5: (46.489,42.100,121.287)
C4: (45.247,41.512,121.189)
P: (45.690,38.875,127.948)
C4': (44.125,38.573,124.395)
C2': (43.666,38.972,122.114)
O2': (42.319,38.561,122.036)
N1: (46.248,42.510,119.018)
N2: (44.362,41.863,117.851)
N3: (44.458,41.382,120.102)
N7: (46.968,42.027,122.588)
N9: (44.960,41.050,122.451)
O5': (44.865,39.076,126.607)
O3': (44.259,36.708,122.874)
OP2: (47.141,38.984,127.629)
C3': (44.507,38.088,123.017)
C1': (43.769,40.308,122.854)
C5': (45.185,38.343,125.432)
O6: (48.176,43.209,120.006)
O4': (43.902,39.998,124.233)
C8: (46.028,41.404,123.243)
C2: (45.014,41.906,119.025)
C6: (47.076,42.655,120.125)
C5: (46.489,42.100,121.287)
C4: (45.247,41.512,121.189)
P: (45.690,38.875,127.948)
C4': (44.125,38.573,124.395)
C2': (43.666,38.972,122.114)
O2': (42.319,38.561,122.036)
N1: (46.248,42.510,119.018)
N2: (44.362,41.863,117.851)
N3: (44.458,41.382,120.102)
N7: (46.968,42.027,122.588)
N9: (44.960,41.050,122.451)
O5': (44.865,39.076,126.607)
O3': (44.259,36.708,122.874)
C4: (49.354,40.330,119.911)
N3: (49.140,40.485,118.558)
OP1: (44.886,34.384,122.207)
OP2: (46.670,36.104,122.906)
C2: (48.073,40.018,117.830)
C1': (45.902,38.866,117.872)
C3': (45.647,36.518,117.858)
O5': (45.434,36.293,120.713)
O4': (44.926,38.517,118.841)
C5': (44.218,36.473,119.960)
P: (45.384,35.782,122.221)
C4': (44.512,37.142,118.640)
C2': (46.088,37.658,116.951)
O2': (45.241,37.817,115.832)
N1: (47.115,39.331,118.568)
O4: (50.311,40.897,120.441)
O2: (47.988,40.195,116.622)
C6: (47.291,39.116,119.915)
C5: (48.348,39.577,120.590)
O3': (45.167,35.401,117.138)
N3: (49.140,40.485,118.558)
OP1: (44.886,34.384,122.207)
OP2: (46.670,36.104,122.906)
C2: (48.073,40.018,117.830)
C1': (45.902,38.866,117.872)
C3': (45.647,36.518,117.858)
O5': (45.434,36.293,120.713)
O4': (44.926,38.517,118.841)
C5': (44.218,36.473,119.960)
P: (45.384,35.782,122.221)
C4': (44.512,37.142,118.640)
C2': (46.088,37.658,116.951)
O2': (45.241,37.817,115.832)
N1: (47.115,39.331,118.568)
O4: (50.311,40.897,120.441)
O2: (47.988,40.195,116.622)
C6: (47.291,39.116,119.915)
C5: (48.348,39.577,120.590)
O3': (45.167,35.401,117.138)
Image (generated by PyMOL):