Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RFK:E8:E7
Extra
PDB:
ATOM 1 O3' G A 7 -7.524 34.514 87.589 1.00 43.94 O
ATOM 2 P C A 8 -7.304 34.850 89.122 1.00 44.98 P
ATOM 3 OP1 C A 8 -8.157 33.873 89.853 1.00 45.60 O
ATOM 4 OP2 C A 8 -7.510 36.307 89.331 1.00 44.85 O
ATOM 5 O5' C A 8 -5.744 34.515 89.321 1.00 43.67 O
ATOM 6 C5' C A 8 -5.061 33.435 88.679 1.00 42.05 C
ATOM 7 C4' C A 8 -3.617 33.823 88.410 1.00 43.01 C
ATOM 8 O4' C A 8 -3.671 34.721 87.294 1.00 42.53 O
ATOM 9 C3' C A 8 -2.856 34.682 89.440 1.00 43.75 C
ATOM 10 O3' C A 8 -2.171 33.967 90.438 1.00 45.36 O
ATOM 11 C2' C A 8 -1.808 35.374 88.594 1.00 42.92 C
ATOM 12 O2' C A 8 -0.771 34.540 88.116 1.00 44.85 O
ATOM 13 C1' C A 8 -2.691 35.732 87.433 1.00 40.12 C
ATOM 14 N1 C A 8 -3.321 37.041 87.579 1.00 38.39 N
ATOM 15 C2 C A 8 -2.494 38.177 87.437 1.00 37.95 C
ATOM 16 O2 C A 8 -1.275 38.034 87.226 1.00 36.03 O
ATOM 17 N3 C A 8 -3.082 39.400 87.542 1.00 37.93 N
ATOM 18 C4 C A 8 -4.409 39.476 87.771 1.00 38.71 C
ATOM 19 N4 C A 8 -4.950 40.690 87.874 1.00 38.16 N
ATOM 20 C5 C A 8 -5.252 38.324 87.929 1.00 37.29 C
ATOM 21 C6 C A 8 -4.661 37.137 87.829 1.00 37.00 C
ATOM 22 P U A 9 -2.268 34.488 91.935 1.00 47.10 P
ATOM 23 OP1 U A 9 -2.078 33.284 92.774 1.00 46.55 O
ATOM 24 OP2 U A 9 -3.467 35.345 92.096 1.00 47.25 O
ATOM 25 O5' U A 9 -0.980 35.429 92.055 1.00 49.30 O
TER
ATOM 1 O3' C B 6 -12.788 36.738 83.822 1.00 44.60 O
ATOM 2 P G B 7 -12.350 36.825 85.351 1.00 44.87 P
ATOM 3 OP1 G B 7 -13.531 36.372 86.117 1.00 45.06 O
ATOM 4 OP2 G B 7 -11.740 38.164 85.553 1.00 45.29 O
ATOM 5 O5' G B 7 -11.214 35.713 85.553 1.00 44.27 O
ATOM 6 C5' G B 7 -10.090 36.025 86.351 1.00 43.54 C
ATOM 7 C4' G B 7 -8.881 35.270 85.854 1.00 43.19 C
ATOM 8 O4' G B 7 -8.554 35.675 84.510 1.00 42.63 O
ATOM 9 C3' G B 7 -7.625 35.523 86.658 1.00 42.59 C
ATOM 10 O3' G B 7 -7.524 34.514 87.589 1.00 43.94 O
ATOM 11 C2' G B 7 -6.514 35.378 85.636 1.00 42.36 C
ATOM 12 O2' G B 7 -6.171 34.057 85.279 1.00 42.13 O
ATOM 13 C1' G B 7 -7.191 36.053 84.473 1.00 43.01 C
ATOM 14 N9 G B 7 -7.069 37.505 84.530 1.00 42.91 N
ATOM 15 C8 G B 7 -8.109 38.394 84.613 1.00 42.88 C
ATOM 16 N7 G B 7 -7.726 39.629 84.618 1.00 42.52 N
ATOM 17 C5 G B 7 -6.349 39.549 84.536 1.00 42.78 C
ATOM 18 C6 G B 7 -5.406 40.599 84.519 1.00 43.03 C
ATOM 19 O6 G B 7 -5.642 41.811 84.567 1.00 42.41 O
ATOM 20 N1 G B 7 -4.094 40.130 84.445 1.00 43.37 N
ATOM 21 C2 G B 7 -3.747 38.795 84.388 1.00 43.58 C
ATOM 22 N2 G B 7 -2.421 38.570 84.316 1.00 43.28 N
ATOM 23 N3 G B 7 -4.632 37.784 84.413 1.00 42.43 N
ATOM 24 C4 G B 7 -5.912 38.245 84.487 1.00 42.35 C
ATOM 25 P C B 8 -7.304 34.850 89.122 1.00 44.98 P
ATOM 26 OP1 C B 8 -8.157 33.873 89.853 1.00 45.60 O
ATOM 27 OP2 C B 8 -7.510 36.307 89.331 1.00 44.85 O
ATOM 28 O5' C B 8 -5.744 34.515 89.321 1.00 43.67 O
TER
ATOM 2 P C A 8 -7.304 34.850 89.122 1.00 44.98 P
ATOM 3 OP1 C A 8 -8.157 33.873 89.853 1.00 45.60 O
ATOM 4 OP2 C A 8 -7.510 36.307 89.331 1.00 44.85 O
ATOM 5 O5' C A 8 -5.744 34.515 89.321 1.00 43.67 O
ATOM 6 C5' C A 8 -5.061 33.435 88.679 1.00 42.05 C
ATOM 7 C4' C A 8 -3.617 33.823 88.410 1.00 43.01 C
ATOM 8 O4' C A 8 -3.671 34.721 87.294 1.00 42.53 O
ATOM 9 C3' C A 8 -2.856 34.682 89.440 1.00 43.75 C
ATOM 10 O3' C A 8 -2.171 33.967 90.438 1.00 45.36 O
ATOM 11 C2' C A 8 -1.808 35.374 88.594 1.00 42.92 C
ATOM 12 O2' C A 8 -0.771 34.540 88.116 1.00 44.85 O
ATOM 13 C1' C A 8 -2.691 35.732 87.433 1.00 40.12 C
ATOM 14 N1 C A 8 -3.321 37.041 87.579 1.00 38.39 N
ATOM 15 C2 C A 8 -2.494 38.177 87.437 1.00 37.95 C
ATOM 16 O2 C A 8 -1.275 38.034 87.226 1.00 36.03 O
ATOM 17 N3 C A 8 -3.082 39.400 87.542 1.00 37.93 N
ATOM 18 C4 C A 8 -4.409 39.476 87.771 1.00 38.71 C
ATOM 19 N4 C A 8 -4.950 40.690 87.874 1.00 38.16 N
ATOM 20 C5 C A 8 -5.252 38.324 87.929 1.00 37.29 C
ATOM 21 C6 C A 8 -4.661 37.137 87.829 1.00 37.00 C
ATOM 22 P U A 9 -2.268 34.488 91.935 1.00 47.10 P
ATOM 23 OP1 U A 9 -2.078 33.284 92.774 1.00 46.55 O
ATOM 24 OP2 U A 9 -3.467 35.345 92.096 1.00 47.25 O
ATOM 25 O5' U A 9 -0.980 35.429 92.055 1.00 49.30 O
TER
ATOM 1 O3' C B 6 -12.788 36.738 83.822 1.00 44.60 O
ATOM 2 P G B 7 -12.350 36.825 85.351 1.00 44.87 P
ATOM 3 OP1 G B 7 -13.531 36.372 86.117 1.00 45.06 O
ATOM 4 OP2 G B 7 -11.740 38.164 85.553 1.00 45.29 O
ATOM 5 O5' G B 7 -11.214 35.713 85.553 1.00 44.27 O
ATOM 6 C5' G B 7 -10.090 36.025 86.351 1.00 43.54 C
ATOM 7 C4' G B 7 -8.881 35.270 85.854 1.00 43.19 C
ATOM 8 O4' G B 7 -8.554 35.675 84.510 1.00 42.63 O
ATOM 9 C3' G B 7 -7.625 35.523 86.658 1.00 42.59 C
ATOM 10 O3' G B 7 -7.524 34.514 87.589 1.00 43.94 O
ATOM 11 C2' G B 7 -6.514 35.378 85.636 1.00 42.36 C
ATOM 12 O2' G B 7 -6.171 34.057 85.279 1.00 42.13 O
ATOM 13 C1' G B 7 -7.191 36.053 84.473 1.00 43.01 C
ATOM 14 N9 G B 7 -7.069 37.505 84.530 1.00 42.91 N
ATOM 15 C8 G B 7 -8.109 38.394 84.613 1.00 42.88 C
ATOM 16 N7 G B 7 -7.726 39.629 84.618 1.00 42.52 N
ATOM 17 C5 G B 7 -6.349 39.549 84.536 1.00 42.78 C
ATOM 18 C6 G B 7 -5.406 40.599 84.519 1.00 43.03 C
ATOM 19 O6 G B 7 -5.642 41.811 84.567 1.00 42.41 O
ATOM 20 N1 G B 7 -4.094 40.130 84.445 1.00 43.37 N
ATOM 21 C2 G B 7 -3.747 38.795 84.388 1.00 43.58 C
ATOM 22 N2 G B 7 -2.421 38.570 84.316 1.00 43.28 N
ATOM 23 N3 G B 7 -4.632 37.784 84.413 1.00 42.43 N
ATOM 24 C4 G B 7 -5.912 38.245 84.487 1.00 42.35 C
ATOM 25 P C B 8 -7.304 34.850 89.122 1.00 44.98 P
ATOM 26 OP1 C B 8 -8.157 33.873 89.853 1.00 45.60 O
ATOM 27 OP2 C B 8 -7.510 36.307 89.331 1.00 44.85 O
ATOM 28 O5' C B 8 -5.744 34.515 89.321 1.00 43.67 O
TER
Atoms:
C2: (-2.494,38.177,87.437)
OP1: (-8.157,33.873,89.853)
OP2: (-7.510,36.307,89.331)
C4: (-4.409,39.476,87.771)
O5': (-5.744,34.515,89.321)
C3': (-2.856,34.682,89.440)
C1': (-2.691,35.732,87.433)
O4': (-3.671,34.721,87.294)
C5': (-5.061,33.435,88.679)
P: (-7.304,34.850,89.122)
O2: (-1.275,38.034,87.226)
C4': (-3.617,33.823,88.410)
C2': (-1.808,35.374,88.594)
O2': (-0.771,34.540,88.116)
N1: (-3.321,37.041,87.579)
N3: (-3.082,39.400,87.542)
N4: (-4.950,40.690,87.874)
C6: (-4.661,37.137,87.829)
C5: (-5.252,38.324,87.929)
O3': (-2.171,33.967,90.438)
OP1: (-8.157,33.873,89.853)
OP2: (-7.510,36.307,89.331)
C4: (-4.409,39.476,87.771)
O5': (-5.744,34.515,89.321)
C3': (-2.856,34.682,89.440)
C1': (-2.691,35.732,87.433)
O4': (-3.671,34.721,87.294)
C5': (-5.061,33.435,88.679)
P: (-7.304,34.850,89.122)
O2: (-1.275,38.034,87.226)
C4': (-3.617,33.823,88.410)
C2': (-1.808,35.374,88.594)
O2': (-0.771,34.540,88.116)
N1: (-3.321,37.041,87.579)
N3: (-3.082,39.400,87.542)
N4: (-4.950,40.690,87.874)
C6: (-4.661,37.137,87.829)
C5: (-5.252,38.324,87.929)
O3': (-2.171,33.967,90.438)
OP1: (-13.531,36.372,86.117)
OP2: (-11.740,38.164,85.553)
C3': (-7.625,35.523,86.658)
C1': (-7.191,36.053,84.473)
C5': (-10.090,36.025,86.351)
O6: (-5.642,41.811,84.567)
O4': (-8.554,35.675,84.510)
C8: (-8.109,38.394,84.613)
C2: (-3.747,38.795,84.388)
C6: (-5.406,40.599,84.519)
C5: (-6.349,39.549,84.536)
C4: (-5.912,38.245,84.487)
P: (-12.350,36.825,85.351)
C4': (-8.881,35.270,85.854)
C2': (-6.514,35.378,85.636)
O2': (-6.171,34.057,85.279)
N1: (-4.094,40.130,84.445)
N2: (-2.421,38.570,84.316)
N3: (-4.632,37.784,84.413)
N7: (-7.726,39.629,84.618)
N9: (-7.069,37.505,84.530)
O5': (-11.214,35.713,85.553)
O3': (-7.524,34.514,87.589)
OP2: (-11.740,38.164,85.553)
C3': (-7.625,35.523,86.658)
C1': (-7.191,36.053,84.473)
C5': (-10.090,36.025,86.351)
O6: (-5.642,41.811,84.567)
O4': (-8.554,35.675,84.510)
C8: (-8.109,38.394,84.613)
C2: (-3.747,38.795,84.388)
C6: (-5.406,40.599,84.519)
C5: (-6.349,39.549,84.536)
C4: (-5.912,38.245,84.487)
P: (-12.350,36.825,85.351)
C4': (-8.881,35.270,85.854)
C2': (-6.514,35.378,85.636)
O2': (-6.171,34.057,85.279)
N1: (-4.094,40.130,84.445)
N2: (-2.421,38.570,84.316)
N3: (-4.632,37.784,84.413)
N7: (-7.726,39.629,84.618)
N9: (-7.069,37.505,84.530)
O5': (-11.214,35.713,85.553)
O3': (-7.524,34.514,87.589)
Image (generated by PyMOL):