Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YDH:A43:A42
Extra
PDB:
ATOM 1 O3' G A 42 21.879 6.023 17.242 1.00100.22 O
ATOM 2 P C A 43 22.551 5.570 15.868 1.00101.70 P
ATOM 3 OP1 C A 43 24.027 5.458 15.917 1.00100.00 O
ATOM 4 OP2 C A 43 21.935 6.441 14.849 1.00103.20 O
ATOM 5 O5' C A 43 22.000 4.089 15.728 1.00100.75 O
ATOM 6 C5' C A 43 22.616 3.071 16.495 1.00 99.91 C
ATOM 7 C4' C A 43 21.840 1.782 16.366 1.00 98.83 C
ATOM 8 O4' C A 43 20.407 1.989 16.446 1.00 98.87 O
ATOM 9 C3' C A 43 22.042 1.141 15.024 1.00 97.61 C
ATOM 10 O3' C A 43 23.248 0.450 15.067 1.00 97.13 O
ATOM 11 C2' C A 43 20.800 0.260 14.925 1.00 98.23 C
ATOM 12 O2' C A 43 20.835 -0.922 15.697 1.00 98.05 O
ATOM 13 C1' C A 43 19.728 1.128 15.549 1.00 98.16 C
ATOM 14 N1 C A 43 18.833 1.938 14.651 1.00 98.52 N
ATOM 15 C2 C A 43 18.033 1.384 13.627 1.00 97.75 C
ATOM 16 O2 C A 43 18.072 0.177 13.373 1.00 95.63 O
ATOM 17 N3 C A 43 17.217 2.208 12.914 1.00 99.07 N
ATOM 18 C4 C A 43 17.168 3.522 13.185 1.00100.89 C
ATOM 19 N4 C A 43 16.363 4.323 12.467 1.00101.36 N
ATOM 20 C5 C A 43 17.963 4.091 14.219 1.00100.28 C
ATOM 21 C6 C A 43 18.754 3.268 14.908 1.00 99.06 C
ATOM 22 P A A 44 24.017 0.267 13.698 1.00100.49 P
ATOM 23 OP1 A A 44 25.071 -0.772 13.834 1.00 99.47 O
ATOM 24 OP2 A A 44 24.357 1.637 13.248 1.00 99.55 O
ATOM 25 O5' A A 44 22.860 -0.282 12.738 1.00 99.25 O
TER
ATOM 1 O3' G B 41 18.521 11.584 18.006 1.00113.17 O
ATOM 2 P G B 42 19.285 10.876 16.796 1.00111.57 P
ATOM 3 OP1 G B 42 20.684 11.376 16.831 1.00110.58 O
ATOM 4 OP2 G B 42 18.456 11.064 15.579 1.00110.86 O
ATOM 5 O5' G B 42 19.250 9.318 17.183 1.00108.93 O
ATOM 6 C5' G B 42 20.325 8.788 17.947 1.00106.28 C
ATOM 7 C4' G B 42 20.124 7.335 18.347 1.00104.00 C
ATOM 8 O4' G B 42 18.742 7.066 18.707 1.00101.79 O
ATOM 9 C3' G B 42 20.482 6.378 17.228 1.00101.81 C
ATOM 10 O3' G B 42 21.879 6.023 17.242 1.00100.22 O
ATOM 11 C2' G B 42 19.570 5.202 17.516 1.00101.99 C
ATOM 12 O2' G B 42 20.244 4.189 18.224 1.00101.38 O
ATOM 13 C1' G B 42 18.376 5.759 18.299 1.00102.96 C
ATOM 14 N9 G B 42 17.121 5.805 17.509 1.00105.56 N
ATOM 15 C8 G B 42 16.432 6.940 17.127 1.00106.70 C
ATOM 16 N7 G B 42 15.352 6.717 16.431 1.00107.03 N
ATOM 17 C5 G B 42 15.305 5.339 16.326 1.00106.33 C
ATOM 18 C6 G B 42 14.347 4.530 15.669 1.00106.38 C
ATOM 19 O6 G B 42 13.350 4.917 15.055 1.00105.63 O
ATOM 20 N1 G B 42 14.637 3.168 15.775 1.00106.01 N
ATOM 21 C2 G B 42 15.730 2.665 16.448 1.00106.88 C
ATOM 22 N2 G B 42 15.870 1.330 16.464 1.00106.78 N
ATOM 23 N3 G B 42 16.635 3.424 17.073 1.00106.99 N
ATOM 24 C4 G B 42 16.373 4.756 16.979 1.00106.14 C
ATOM 25 P C B 43 22.551 5.570 15.868 1.00101.70 P
ATOM 26 OP1 C B 43 24.027 5.458 15.917 1.00100.00 O
ATOM 27 OP2 C B 43 21.935 6.441 14.849 1.00103.20 O
ATOM 28 O5' C B 43 22.000 4.089 15.728 1.00100.75 O
TER
ATOM 2 P C A 43 22.551 5.570 15.868 1.00101.70 P
ATOM 3 OP1 C A 43 24.027 5.458 15.917 1.00100.00 O
ATOM 4 OP2 C A 43 21.935 6.441 14.849 1.00103.20 O
ATOM 5 O5' C A 43 22.000 4.089 15.728 1.00100.75 O
ATOM 6 C5' C A 43 22.616 3.071 16.495 1.00 99.91 C
ATOM 7 C4' C A 43 21.840 1.782 16.366 1.00 98.83 C
ATOM 8 O4' C A 43 20.407 1.989 16.446 1.00 98.87 O
ATOM 9 C3' C A 43 22.042 1.141 15.024 1.00 97.61 C
ATOM 10 O3' C A 43 23.248 0.450 15.067 1.00 97.13 O
ATOM 11 C2' C A 43 20.800 0.260 14.925 1.00 98.23 C
ATOM 12 O2' C A 43 20.835 -0.922 15.697 1.00 98.05 O
ATOM 13 C1' C A 43 19.728 1.128 15.549 1.00 98.16 C
ATOM 14 N1 C A 43 18.833 1.938 14.651 1.00 98.52 N
ATOM 15 C2 C A 43 18.033 1.384 13.627 1.00 97.75 C
ATOM 16 O2 C A 43 18.072 0.177 13.373 1.00 95.63 O
ATOM 17 N3 C A 43 17.217 2.208 12.914 1.00 99.07 N
ATOM 18 C4 C A 43 17.168 3.522 13.185 1.00100.89 C
ATOM 19 N4 C A 43 16.363 4.323 12.467 1.00101.36 N
ATOM 20 C5 C A 43 17.963 4.091 14.219 1.00100.28 C
ATOM 21 C6 C A 43 18.754 3.268 14.908 1.00 99.06 C
ATOM 22 P A A 44 24.017 0.267 13.698 1.00100.49 P
ATOM 23 OP1 A A 44 25.071 -0.772 13.834 1.00 99.47 O
ATOM 24 OP2 A A 44 24.357 1.637 13.248 1.00 99.55 O
ATOM 25 O5' A A 44 22.860 -0.282 12.738 1.00 99.25 O
TER
ATOM 1 O3' G B 41 18.521 11.584 18.006 1.00113.17 O
ATOM 2 P G B 42 19.285 10.876 16.796 1.00111.57 P
ATOM 3 OP1 G B 42 20.684 11.376 16.831 1.00110.58 O
ATOM 4 OP2 G B 42 18.456 11.064 15.579 1.00110.86 O
ATOM 5 O5' G B 42 19.250 9.318 17.183 1.00108.93 O
ATOM 6 C5' G B 42 20.325 8.788 17.947 1.00106.28 C
ATOM 7 C4' G B 42 20.124 7.335 18.347 1.00104.00 C
ATOM 8 O4' G B 42 18.742 7.066 18.707 1.00101.79 O
ATOM 9 C3' G B 42 20.482 6.378 17.228 1.00101.81 C
ATOM 10 O3' G B 42 21.879 6.023 17.242 1.00100.22 O
ATOM 11 C2' G B 42 19.570 5.202 17.516 1.00101.99 C
ATOM 12 O2' G B 42 20.244 4.189 18.224 1.00101.38 O
ATOM 13 C1' G B 42 18.376 5.759 18.299 1.00102.96 C
ATOM 14 N9 G B 42 17.121 5.805 17.509 1.00105.56 N
ATOM 15 C8 G B 42 16.432 6.940 17.127 1.00106.70 C
ATOM 16 N7 G B 42 15.352 6.717 16.431 1.00107.03 N
ATOM 17 C5 G B 42 15.305 5.339 16.326 1.00106.33 C
ATOM 18 C6 G B 42 14.347 4.530 15.669 1.00106.38 C
ATOM 19 O6 G B 42 13.350 4.917 15.055 1.00105.63 O
ATOM 20 N1 G B 42 14.637 3.168 15.775 1.00106.01 N
ATOM 21 C2 G B 42 15.730 2.665 16.448 1.00106.88 C
ATOM 22 N2 G B 42 15.870 1.330 16.464 1.00106.78 N
ATOM 23 N3 G B 42 16.635 3.424 17.073 1.00106.99 N
ATOM 24 C4 G B 42 16.373 4.756 16.979 1.00106.14 C
ATOM 25 P C B 43 22.551 5.570 15.868 1.00101.70 P
ATOM 26 OP1 C B 43 24.027 5.458 15.917 1.00100.00 O
ATOM 27 OP2 C B 43 21.935 6.441 14.849 1.00103.20 O
ATOM 28 O5' C B 43 22.000 4.089 15.728 1.00100.75 O
TER
Atoms:
C2: (18.033,1.384,13.627)
OP1: (24.027,5.458,15.917)
OP2: (21.935,6.441,14.849)
C4: (17.168,3.522,13.185)
O5': (22.000,4.089,15.728)
C3': (22.042,1.141,15.024)
C1': (19.728,1.128,15.549)
O4': (20.407,1.989,16.446)
C5': (22.616,3.071,16.495)
P: (22.551,5.570,15.868)
O2: (18.072,0.177,13.373)
C4': (21.840,1.782,16.366)
C2': (20.800,0.260,14.925)
O2': (20.835,-0.922,15.697)
N1: (18.833,1.938,14.651)
N3: (17.217,2.208,12.914)
N4: (16.363,4.323,12.467)
C6: (18.754,3.268,14.908)
C5: (17.963,4.091,14.219)
O3': (23.248,0.450,15.067)
OP1: (24.027,5.458,15.917)
OP2: (21.935,6.441,14.849)
C4: (17.168,3.522,13.185)
O5': (22.000,4.089,15.728)
C3': (22.042,1.141,15.024)
C1': (19.728,1.128,15.549)
O4': (20.407,1.989,16.446)
C5': (22.616,3.071,16.495)
P: (22.551,5.570,15.868)
O2: (18.072,0.177,13.373)
C4': (21.840,1.782,16.366)
C2': (20.800,0.260,14.925)
O2': (20.835,-0.922,15.697)
N1: (18.833,1.938,14.651)
N3: (17.217,2.208,12.914)
N4: (16.363,4.323,12.467)
C6: (18.754,3.268,14.908)
C5: (17.963,4.091,14.219)
O3': (23.248,0.450,15.067)
OP1: (20.684,11.376,16.831)
OP2: (18.456,11.064,15.579)
C3': (20.482,6.378,17.228)
C1': (18.376,5.759,18.299)
C5': (20.325,8.788,17.947)
O6: (13.350,4.917,15.055)
O4': (18.742,7.066,18.707)
C8: (16.432,6.940,17.127)
C2: (15.730,2.665,16.448)
C6: (14.347,4.530,15.669)
C5: (15.305,5.339,16.326)
C4: (16.373,4.756,16.979)
P: (19.285,10.876,16.796)
C4': (20.124,7.335,18.347)
C2': (19.570,5.202,17.516)
O2': (20.244,4.189,18.224)
N1: (14.637,3.168,15.775)
N2: (15.870,1.330,16.464)
N3: (16.635,3.424,17.073)
N7: (15.352,6.717,16.431)
N9: (17.121,5.805,17.509)
O5': (19.250,9.318,17.183)
O3': (21.879,6.023,17.242)
OP2: (18.456,11.064,15.579)
C3': (20.482,6.378,17.228)
C1': (18.376,5.759,18.299)
C5': (20.325,8.788,17.947)
O6: (13.350,4.917,15.055)
O4': (18.742,7.066,18.707)
C8: (16.432,6.940,17.127)
C2: (15.730,2.665,16.448)
C6: (14.347,4.530,15.669)
C5: (15.305,5.339,16.326)
C4: (16.373,4.756,16.979)
P: (19.285,10.876,16.796)
C4': (20.124,7.335,18.347)
C2': (19.570,5.202,17.516)
O2': (20.244,4.189,18.224)
N1: (14.637,3.168,15.775)
N2: (15.870,1.330,16.464)
N3: (16.635,3.424,17.073)
N7: (15.352,6.717,16.431)
N9: (17.121,5.805,17.509)
O5': (19.250,9.318,17.183)
O3': (21.879,6.023,17.242)
Image (generated by PyMOL):