ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A387:A526

Extra

PDB:
ATOM 1 O3' G A 386 -35.551 39.200 101.140 1.00 63.64 O
ATOM 2 P A A 387 -36.244 38.433 99.926 1.00 63.36 P
ATOM 3 OP1 A A 387 -37.637 38.939 99.864 1.00 62.15 O
ATOM 4 OP2 A A 387 -35.974 36.984 100.089 1.00 71.70 O
ATOM 5 O5' A A 387 -35.455 38.935 98.626 1.00 56.12 O
ATOM 6 C5' A A 387 -35.588 40.275 98.245 1.00 59.78 C
ATOM 7 C4' A A 387 -34.994 40.501 96.881 1.00 60.38 C
ATOM 8 O4' A A 387 -35.810 39.810 95.916 1.00 64.18 O
ATOM 9 C3' A A 387 -35.062 41.940 96.405 1.00 75.24 C
ATOM 10 O3' A A 387 -33.996 42.704 96.937 1.00 73.71 O
ATOM 11 C2' A A 387 -34.918 41.752 94.904 1.00 71.02 C
ATOM 12 O2' A A 387 -33.584 41.464 94.553 1.00 77.90 O
ATOM 13 C1' A A 387 -35.756 40.503 94.676 1.00 65.56 C
ATOM 14 N9 A A 387 -37.111 40.762 94.189 1.00 64.17 N
ATOM 15 C8 A A 387 -37.572 40.578 92.914 1.00 68.42 C
ATOM 16 N7 A A 387 -38.840 40.879 92.759 1.00 68.73 N
ATOM 17 C5 A A 387 -39.242 41.295 94.020 1.00 66.97 C
ATOM 18 C6 A A 387 -40.475 41.755 94.530 1.00 63.03 C
ATOM 19 N6 A A 387 -41.581 41.877 93.798 1.00 69.46 N
ATOM 20 N1 A A 387 -40.545 42.086 95.830 1.00 61.16 N
ATOM 21 C2 A A 387 -39.439 41.976 96.568 1.00 72.73 C
ATOM 22 N3 A A 387 -38.224 41.553 96.210 1.00 75.55 N
ATOM 23 C4 A A 387 -38.189 41.226 94.910 1.00 68.33 C
ATOM 24 P C A 388 -34.093 43.269 98.427 1.00 69.43 P
ATOM 25 OP1 C A 388 -33.723 42.210 99.374 1.00 64.04 O
ATOM 26 OP2 C A 388 -35.394 43.960 98.580 1.00 48.88 O
ATOM 27 O5' C A 388 -32.910 44.340 98.433 1.00 57.98 O
TER

ATOM 1 O3' A B 525 -38.499 39.786 89.402 1.00 56.19 O
ATOM 2 P G B 526 -37.119 40.289 88.755 1.00 58.77 P
ATOM 3 OP1 G B 526 -36.544 39.238 87.879 1.00 49.47 O
ATOM 4 OP2 G B 526 -36.336 40.832 89.894 1.00 58.03 O
ATOM 5 O5' G B 526 -37.617 41.505 87.838 1.00 51.59 O
ATOM 6 C5' G B 526 -38.224 42.658 88.448 1.00 51.61 C
ATOM 7 C4' G B 526 -39.680 42.841 88.034 1.00 50.11 C
ATOM 8 O4' G B 526 -40.558 42.226 89.017 1.00 53.75 O
ATOM 9 C3' G B 526 -40.115 44.299 87.947 1.00 44.85 C
ATOM 10 O3' G B 526 -40.039 44.732 86.597 1.00 47.99 O
ATOM 11 C2' G B 526 -41.550 44.268 88.462 1.00 51.65 C
ATOM 12 O2' G B 526 -42.465 43.880 87.459 1.00 60.68 O
ATOM 13 C1' G B 526 -41.460 43.190 89.536 1.00 54.00 C
ATOM 14 N9 G B 526 -40.953 43.703 90.812 1.00 52.18 N
ATOM 15 C8 G B 526 -39.667 43.599 91.289 1.00 49.69 C
ATOM 16 N7 G B 526 -39.498 44.148 92.458 1.00 42.03 N
ATOM 17 C5 G B 526 -40.747 44.656 92.781 1.00 46.81 C
ATOM 18 C6 G B 526 -41.162 45.367 93.934 1.00 55.28 C
ATOM 19 O6 G B 526 -40.483 45.699 94.926 1.00 51.34 O
ATOM 20 N1 G B 526 -42.514 45.694 93.862 1.00 51.77 N
ATOM 21 C2 G B 526 -43.344 45.377 92.817 1.00 48.12 C
ATOM 22 N2 G B 526 -44.612 45.780 92.932 1.00 47.81 N
ATOM 23 N3 G B 526 -42.966 44.718 91.734 1.00 44.70 N
ATOM 24 C4 G B 526 -41.655 44.391 91.781 1.00 44.95 C
ATOM 25 P C B 527 -39.398 46.161 86.218 1.00 55.90 P
ATOM 26 OP1 C B 527 -39.211 46.174 84.738 1.00 49.02 O
ATOM 27 OP2 C B 527 -38.252 46.427 87.119 1.00 62.84 O
ATOM 28 O5' C B 527 -40.544 47.196 86.649 1.00 39.46 O
TER

Atoms:
OP1: (-37.637,38.939,99.864)
OP2: (-35.974,36.984,100.089)
C3': (-35.062,41.940,96.405)
C1': (-35.756,40.503,94.676)
C5': (-35.588,40.275,98.245)
O4': (-35.810,39.810,95.916)
C8: (-37.572,40.578,92.914)
O2': (-33.584,41.464,94.553)
C6: (-40.475,41.755,94.530)
C5: (-39.242,41.295,94.020)
C4: (-38.189,41.226,94.910)
P: (-36.244,38.433,99.926)
C4': (-34.994,40.501,96.881)
C2': (-34.918,41.752,94.904)
C2: (-39.439,41.976,96.568)
N1: (-40.545,42.086,95.830)
N3: (-38.224,41.553,96.210)
N6: (-41.581,41.877,93.798)
N7: (-38.840,40.879,92.759)
N9: (-37.111,40.762,94.189)
O5': (-35.455,38.935,98.626)
O3': (-33.996,42.704,96.937)
OP1: (-36.544,39.238,87.879)
OP2: (-36.336,40.832,89.894)
C3': (-40.115,44.299,87.947)
C1': (-41.460,43.190,89.536)
C5': (-38.224,42.658,88.448)
O6: (-40.483,45.699,94.926)
O4': (-40.558,42.226,89.017)
C8: (-39.667,43.599,91.289)
C2: (-43.344,45.377,92.817)
C6: (-41.162,45.367,93.934)
C5: (-40.747,44.656,92.781)
C4: (-41.655,44.391,91.781)
P: (-37.119,40.289,88.755)
C4': (-39.680,42.841,88.034)
C2': (-41.550,44.268,88.462)
O2': (-42.465,43.880,87.459)
N1: (-42.514,45.694,93.862)
N2: (-44.612,45.780,92.932)
N3: (-42.966,44.718,91.734)
N7: (-39.498,44.148,92.458)
N9: (-40.953,43.703,90.812)
O5': (-37.617,41.505,87.838)
O3': (-40.039,44.732,86.597)
Image (generated by PyMOL):
PyMOL image
show in jmol