Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1234:A1278
Extra
PDB:
ATOM 1 O3' A A1233 25.693 -92.356 -2.594 1.00 30.08 O
ATOM 2 P G A1234 25.314 -91.081 -1.746 1.00 37.42 P
ATOM 3 OP1 G A1234 24.854 -91.543 -0.406 1.00 51.01 O
ATOM 4 OP2 G A1234 24.404 -90.278 -2.578 1.00 52.74 O
ATOM 5 O5' G A1234 26.699 -90.364 -1.609 1.00 54.73 O
ATOM 6 C5' G A1234 27.816 -91.056 -1.085 1.00 52.55 C
ATOM 7 C4' G A1234 29.083 -90.408 -1.531 1.00 43.09 C
ATOM 8 O4' G A1234 29.102 -90.391 -2.973 1.00 41.64 O
ATOM 9 C3' G A1234 29.250 -88.954 -1.103 1.00 41.61 C
ATOM 10 O3' G A1234 29.899 -88.836 0.161 1.00 55.75 O
ATOM 11 C2' G A1234 30.041 -88.332 -2.246 1.00 44.50 C
ATOM 12 O2' G A1234 31.430 -88.490 -2.034 1.00 51.34 O
ATOM 13 C1' G A1234 29.642 -89.191 -3.446 1.00 43.62 C
ATOM 14 N9 G A1234 28.645 -88.537 -4.314 1.00 44.07 N
ATOM 15 C8 G A1234 27.293 -88.604 -4.180 1.00 44.34 C
ATOM 16 N7 G A1234 26.680 -87.927 -5.096 1.00 44.56 N
ATOM 17 C5 G A1234 27.663 -87.397 -5.896 1.00 37.87 C
ATOM 18 C6 G A1234 27.559 -86.574 -7.043 1.00 42.15 C
ATOM 19 O6 G A1234 26.525 -86.150 -7.610 1.00 44.53 O
ATOM 20 N1 G A1234 28.828 -86.255 -7.526 1.00 44.02 N
ATOM 21 C2 G A1234 30.029 -86.683 -6.979 1.00 51.24 C
ATOM 22 N2 G A1234 31.180 -86.291 -7.565 1.00 45.94 N
ATOM 23 N3 G A1234 30.103 -87.455 -5.908 1.00 52.15 N
ATOM 24 C4 G A1234 28.887 -87.777 -5.431 1.00 41.79 C
ATOM 25 P A A1235 29.233 -88.005 1.381 1.00 56.67 P
ATOM 26 OP1 A A1235 30.126 -88.167 2.574 1.00 40.16 O
ATOM 27 OP2 A A1235 27.807 -88.420 1.495 1.00 50.64 O
ATOM 28 O5' A A1235 29.310 -86.533 0.860 1.00 62.15 O
TER
ATOM 1 O3' G B1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U B1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U B1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U B1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U B1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U B1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U B1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U B1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U B1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U B1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U B1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U B1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U B1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U B1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U B1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U B1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U B1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U B1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U B1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U B1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U B1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C B1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C B1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C B1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C B1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
ATOM 2 P G A1234 25.314 -91.081 -1.746 1.00 37.42 P
ATOM 3 OP1 G A1234 24.854 -91.543 -0.406 1.00 51.01 O
ATOM 4 OP2 G A1234 24.404 -90.278 -2.578 1.00 52.74 O
ATOM 5 O5' G A1234 26.699 -90.364 -1.609 1.00 54.73 O
ATOM 6 C5' G A1234 27.816 -91.056 -1.085 1.00 52.55 C
ATOM 7 C4' G A1234 29.083 -90.408 -1.531 1.00 43.09 C
ATOM 8 O4' G A1234 29.102 -90.391 -2.973 1.00 41.64 O
ATOM 9 C3' G A1234 29.250 -88.954 -1.103 1.00 41.61 C
ATOM 10 O3' G A1234 29.899 -88.836 0.161 1.00 55.75 O
ATOM 11 C2' G A1234 30.041 -88.332 -2.246 1.00 44.50 C
ATOM 12 O2' G A1234 31.430 -88.490 -2.034 1.00 51.34 O
ATOM 13 C1' G A1234 29.642 -89.191 -3.446 1.00 43.62 C
ATOM 14 N9 G A1234 28.645 -88.537 -4.314 1.00 44.07 N
ATOM 15 C8 G A1234 27.293 -88.604 -4.180 1.00 44.34 C
ATOM 16 N7 G A1234 26.680 -87.927 -5.096 1.00 44.56 N
ATOM 17 C5 G A1234 27.663 -87.397 -5.896 1.00 37.87 C
ATOM 18 C6 G A1234 27.559 -86.574 -7.043 1.00 42.15 C
ATOM 19 O6 G A1234 26.525 -86.150 -7.610 1.00 44.53 O
ATOM 20 N1 G A1234 28.828 -86.255 -7.526 1.00 44.02 N
ATOM 21 C2 G A1234 30.029 -86.683 -6.979 1.00 51.24 C
ATOM 22 N2 G A1234 31.180 -86.291 -7.565 1.00 45.94 N
ATOM 23 N3 G A1234 30.103 -87.455 -5.908 1.00 52.15 N
ATOM 24 C4 G A1234 28.887 -87.777 -5.431 1.00 41.79 C
ATOM 25 P A A1235 29.233 -88.005 1.381 1.00 56.67 P
ATOM 26 OP1 A A1235 30.126 -88.167 2.574 1.00 40.16 O
ATOM 27 OP2 A A1235 27.807 -88.420 1.495 1.00 50.64 O
ATOM 28 O5' A A1235 29.310 -86.533 0.860 1.00 62.15 O
TER
ATOM 1 O3' G B1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U B1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U B1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U B1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U B1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U B1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U B1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U B1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U B1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U B1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U B1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U B1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U B1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U B1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U B1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U B1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U B1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U B1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U B1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U B1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U B1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C B1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C B1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C B1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C B1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
Atoms:
OP1: (24.854,-91.543,-0.406)
OP2: (24.404,-90.278,-2.578)
C3': (29.250,-88.954,-1.103)
C1': (29.642,-89.191,-3.446)
C5': (27.816,-91.056,-1.085)
O6: (26.525,-86.150,-7.610)
O4': (29.102,-90.391,-2.973)
C8: (27.293,-88.604,-4.180)
C2: (30.029,-86.683,-6.979)
C6: (27.559,-86.574,-7.043)
C5: (27.663,-87.397,-5.896)
C4: (28.887,-87.777,-5.431)
P: (25.314,-91.081,-1.746)
C4': (29.083,-90.408,-1.531)
C2': (30.041,-88.332,-2.246)
O2': (31.430,-88.490,-2.034)
N1: (28.828,-86.255,-7.526)
N2: (31.180,-86.291,-7.565)
N3: (30.103,-87.455,-5.908)
N7: (26.680,-87.927,-5.096)
N9: (28.645,-88.537,-4.314)
O5': (26.699,-90.364,-1.609)
O3': (29.899,-88.836,0.161)
OP2: (24.404,-90.278,-2.578)
C3': (29.250,-88.954,-1.103)
C1': (29.642,-89.191,-3.446)
C5': (27.816,-91.056,-1.085)
O6: (26.525,-86.150,-7.610)
O4': (29.102,-90.391,-2.973)
C8: (27.293,-88.604,-4.180)
C2: (30.029,-86.683,-6.979)
C6: (27.559,-86.574,-7.043)
C5: (27.663,-87.397,-5.896)
C4: (28.887,-87.777,-5.431)
P: (25.314,-91.081,-1.746)
C4': (29.083,-90.408,-1.531)
C2': (30.041,-88.332,-2.246)
O2': (31.430,-88.490,-2.034)
N1: (28.828,-86.255,-7.526)
N2: (31.180,-86.291,-7.565)
N3: (30.103,-87.455,-5.908)
N7: (26.680,-87.927,-5.096)
N9: (28.645,-88.537,-4.314)
O5': (26.699,-90.364,-1.609)
O3': (29.899,-88.836,0.161)
C4: (27.541,-84.803,-4.088)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
Image (generated by PyMOL):