Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A580:A579
Extra
PDB:
ATOM 1 O3' G A 579 -39.814 33.032 -17.380 1.00 15.73 O
ATOM 2 P C A 580 -39.710 33.382 -18.934 1.00 20.29 P
ATOM 3 OP1 C A 580 -38.493 34.216 -19.103 1.00 20.29 O
ATOM 4 OP2 C A 580 -41.021 33.937 -19.353 1.00 20.29 O
ATOM 5 O5' C A 580 -39.492 31.962 -19.607 1.00 20.29 O
ATOM 6 C5' C A 580 -38.473 31.090 -19.156 1.00 20.29 C
ATOM 7 C4' C A 580 -38.316 29.919 -20.081 1.00 20.29 C
ATOM 8 O4' C A 580 -39.281 28.882 -19.746 1.00 20.29 O
ATOM 9 C3' C A 580 -38.600 30.204 -21.537 1.00 20.29 C
ATOM 10 O3' C A 580 -37.535 30.841 -22.195 1.00 20.29 O
ATOM 11 C2' C A 580 -38.924 28.824 -22.067 1.00 20.29 C
ATOM 12 O2' C A 580 -37.759 28.021 -22.144 1.00 20.29 O
ATOM 13 C1' C A 580 -39.793 28.313 -20.932 1.00 20.29 C
ATOM 14 N1 C A 580 -41.191 28.765 -21.100 1.00 20.38 N
ATOM 15 C2 C A 580 -42.017 28.098 -22.023 1.00 20.38 C
ATOM 16 O2 C A 580 -41.587 27.107 -22.651 1.00 20.38 O
ATOM 17 N3 C A 580 -43.283 28.539 -22.197 1.00 20.38 N
ATOM 18 C4 C A 580 -43.731 29.595 -21.518 1.00 20.38 C
ATOM 19 N4 C A 580 -44.994 29.983 -21.731 1.00 20.38 N
ATOM 20 C5 C A 580 -42.904 30.292 -20.596 1.00 20.38 C
ATOM 21 C6 C A 580 -41.654 29.858 -20.423 1.00 20.38 C
ATOM 22 P A A 581 -37.788 31.597 -23.590 1.00 11.30 P
ATOM 23 OP1 A A 581 -36.439 31.854 -24.171 1.00 11.30 O
ATOM 24 OP2 A A 581 -38.697 32.754 -23.325 1.00 11.30 O
ATOM 25 O5' A A 581 -38.554 30.506 -24.465 1.00 11.30 O
TER
ATOM 1 O3' C B 578 -42.539 35.027 -12.202 1.00 14.88 O
ATOM 2 P G B 579 -42.351 35.830 -13.578 1.00 15.73 P
ATOM 3 OP1 G B 579 -41.167 36.712 -13.402 1.00 15.73 O
ATOM 4 OP2 G B 579 -43.664 36.457 -13.906 1.00 15.73 O
ATOM 5 O5' G B 579 -42.017 34.663 -14.614 1.00 15.73 O
ATOM 6 C5' G B 579 -40.879 33.837 -14.421 1.00 15.73 C
ATOM 7 C4' G B 579 -40.937 32.604 -15.279 1.00 15.73 C
ATOM 8 O4' G B 579 -42.108 31.833 -14.934 1.00 15.73 O
ATOM 9 C3' G B 579 -41.060 32.839 -16.774 1.00 15.73 C
ATOM 10 O3' G B 579 -39.814 33.032 -17.380 1.00 15.73 O
ATOM 11 C2' G B 579 -41.762 31.592 -17.254 1.00 15.73 C
ATOM 12 O2' G B 579 -40.853 30.520 -17.363 1.00 15.73 O
ATOM 13 C1' G B 579 -42.698 31.305 -16.093 1.00 15.73 C
ATOM 14 N9 G B 579 -43.998 31.956 -16.259 1.00 15.53 N
ATOM 15 C8 G B 579 -44.297 33.186 -15.733 1.00 15.53 C
ATOM 16 N7 G B 579 -45.511 33.554 -16.000 1.00 15.53 N
ATOM 17 C5 G B 579 -46.029 32.485 -16.732 1.00 15.53 C
ATOM 18 C6 G B 579 -47.315 32.313 -17.292 1.00 15.53 C
ATOM 19 O6 G B 579 -48.252 33.110 -17.212 1.00 15.53 O
ATOM 20 N1 G B 579 -47.453 31.103 -17.978 1.00 15.53 N
ATOM 21 C2 G B 579 -46.463 30.156 -18.084 1.00 15.53 C
ATOM 22 N2 G B 579 -46.765 29.039 -18.771 1.00 15.53 N
ATOM 23 N3 G B 579 -45.259 30.310 -17.547 1.00 15.53 N
ATOM 24 C4 G B 579 -45.112 31.482 -16.897 1.00 15.53 C
ATOM 25 P C B 580 -39.710 33.382 -18.934 1.00 20.29 P
ATOM 26 OP1 C B 580 -38.493 34.216 -19.103 1.00 20.29 O
ATOM 27 OP2 C B 580 -41.021 33.937 -19.353 1.00 20.29 O
ATOM 28 O5' C B 580 -39.492 31.962 -19.607 1.00 20.29 O
TER
ATOM 2 P C A 580 -39.710 33.382 -18.934 1.00 20.29 P
ATOM 3 OP1 C A 580 -38.493 34.216 -19.103 1.00 20.29 O
ATOM 4 OP2 C A 580 -41.021 33.937 -19.353 1.00 20.29 O
ATOM 5 O5' C A 580 -39.492 31.962 -19.607 1.00 20.29 O
ATOM 6 C5' C A 580 -38.473 31.090 -19.156 1.00 20.29 C
ATOM 7 C4' C A 580 -38.316 29.919 -20.081 1.00 20.29 C
ATOM 8 O4' C A 580 -39.281 28.882 -19.746 1.00 20.29 O
ATOM 9 C3' C A 580 -38.600 30.204 -21.537 1.00 20.29 C
ATOM 10 O3' C A 580 -37.535 30.841 -22.195 1.00 20.29 O
ATOM 11 C2' C A 580 -38.924 28.824 -22.067 1.00 20.29 C
ATOM 12 O2' C A 580 -37.759 28.021 -22.144 1.00 20.29 O
ATOM 13 C1' C A 580 -39.793 28.313 -20.932 1.00 20.29 C
ATOM 14 N1 C A 580 -41.191 28.765 -21.100 1.00 20.38 N
ATOM 15 C2 C A 580 -42.017 28.098 -22.023 1.00 20.38 C
ATOM 16 O2 C A 580 -41.587 27.107 -22.651 1.00 20.38 O
ATOM 17 N3 C A 580 -43.283 28.539 -22.197 1.00 20.38 N
ATOM 18 C4 C A 580 -43.731 29.595 -21.518 1.00 20.38 C
ATOM 19 N4 C A 580 -44.994 29.983 -21.731 1.00 20.38 N
ATOM 20 C5 C A 580 -42.904 30.292 -20.596 1.00 20.38 C
ATOM 21 C6 C A 580 -41.654 29.858 -20.423 1.00 20.38 C
ATOM 22 P A A 581 -37.788 31.597 -23.590 1.00 11.30 P
ATOM 23 OP1 A A 581 -36.439 31.854 -24.171 1.00 11.30 O
ATOM 24 OP2 A A 581 -38.697 32.754 -23.325 1.00 11.30 O
ATOM 25 O5' A A 581 -38.554 30.506 -24.465 1.00 11.30 O
TER
ATOM 1 O3' C B 578 -42.539 35.027 -12.202 1.00 14.88 O
ATOM 2 P G B 579 -42.351 35.830 -13.578 1.00 15.73 P
ATOM 3 OP1 G B 579 -41.167 36.712 -13.402 1.00 15.73 O
ATOM 4 OP2 G B 579 -43.664 36.457 -13.906 1.00 15.73 O
ATOM 5 O5' G B 579 -42.017 34.663 -14.614 1.00 15.73 O
ATOM 6 C5' G B 579 -40.879 33.837 -14.421 1.00 15.73 C
ATOM 7 C4' G B 579 -40.937 32.604 -15.279 1.00 15.73 C
ATOM 8 O4' G B 579 -42.108 31.833 -14.934 1.00 15.73 O
ATOM 9 C3' G B 579 -41.060 32.839 -16.774 1.00 15.73 C
ATOM 10 O3' G B 579 -39.814 33.032 -17.380 1.00 15.73 O
ATOM 11 C2' G B 579 -41.762 31.592 -17.254 1.00 15.73 C
ATOM 12 O2' G B 579 -40.853 30.520 -17.363 1.00 15.73 O
ATOM 13 C1' G B 579 -42.698 31.305 -16.093 1.00 15.73 C
ATOM 14 N9 G B 579 -43.998 31.956 -16.259 1.00 15.53 N
ATOM 15 C8 G B 579 -44.297 33.186 -15.733 1.00 15.53 C
ATOM 16 N7 G B 579 -45.511 33.554 -16.000 1.00 15.53 N
ATOM 17 C5 G B 579 -46.029 32.485 -16.732 1.00 15.53 C
ATOM 18 C6 G B 579 -47.315 32.313 -17.292 1.00 15.53 C
ATOM 19 O6 G B 579 -48.252 33.110 -17.212 1.00 15.53 O
ATOM 20 N1 G B 579 -47.453 31.103 -17.978 1.00 15.53 N
ATOM 21 C2 G B 579 -46.463 30.156 -18.084 1.00 15.53 C
ATOM 22 N2 G B 579 -46.765 29.039 -18.771 1.00 15.53 N
ATOM 23 N3 G B 579 -45.259 30.310 -17.547 1.00 15.53 N
ATOM 24 C4 G B 579 -45.112 31.482 -16.897 1.00 15.53 C
ATOM 25 P C B 580 -39.710 33.382 -18.934 1.00 20.29 P
ATOM 26 OP1 C B 580 -38.493 34.216 -19.103 1.00 20.29 O
ATOM 27 OP2 C B 580 -41.021 33.937 -19.353 1.00 20.29 O
ATOM 28 O5' C B 580 -39.492 31.962 -19.607 1.00 20.29 O
TER
Atoms:
C2: (-42.017,28.098,-22.023)
OP1: (-38.493,34.216,-19.103)
OP2: (-41.021,33.937,-19.353)
C4: (-43.731,29.595,-21.518)
O5': (-39.492,31.962,-19.607)
C3': (-38.600,30.204,-21.537)
C1': (-39.793,28.313,-20.932)
O4': (-39.281,28.882,-19.746)
C5': (-38.473,31.090,-19.156)
P: (-39.710,33.382,-18.934)
O2: (-41.587,27.107,-22.651)
C4': (-38.316,29.919,-20.081)
C2': (-38.924,28.824,-22.067)
O2': (-37.759,28.021,-22.144)
N1: (-41.191,28.765,-21.100)
N3: (-43.283,28.539,-22.197)
N4: (-44.994,29.983,-21.731)
C6: (-41.654,29.858,-20.423)
C5: (-42.904,30.292,-20.596)
O3': (-37.535,30.841,-22.195)
OP1: (-38.493,34.216,-19.103)
OP2: (-41.021,33.937,-19.353)
C4: (-43.731,29.595,-21.518)
O5': (-39.492,31.962,-19.607)
C3': (-38.600,30.204,-21.537)
C1': (-39.793,28.313,-20.932)
O4': (-39.281,28.882,-19.746)
C5': (-38.473,31.090,-19.156)
P: (-39.710,33.382,-18.934)
O2: (-41.587,27.107,-22.651)
C4': (-38.316,29.919,-20.081)
C2': (-38.924,28.824,-22.067)
O2': (-37.759,28.021,-22.144)
N1: (-41.191,28.765,-21.100)
N3: (-43.283,28.539,-22.197)
N4: (-44.994,29.983,-21.731)
C6: (-41.654,29.858,-20.423)
C5: (-42.904,30.292,-20.596)
O3': (-37.535,30.841,-22.195)
OP1: (-41.167,36.712,-13.402)
OP2: (-43.664,36.457,-13.906)
C3': (-41.060,32.839,-16.774)
C1': (-42.698,31.305,-16.093)
C5': (-40.879,33.837,-14.421)
O6: (-48.252,33.110,-17.212)
O4': (-42.108,31.833,-14.934)
C8: (-44.297,33.186,-15.733)
C2: (-46.463,30.156,-18.084)
C6: (-47.315,32.313,-17.292)
C5: (-46.029,32.485,-16.732)
C4: (-45.112,31.482,-16.897)
P: (-42.351,35.830,-13.578)
C4': (-40.937,32.604,-15.279)
C2': (-41.762,31.592,-17.254)
O2': (-40.853,30.520,-17.363)
N1: (-47.453,31.103,-17.978)
N2: (-46.765,29.039,-18.771)
N3: (-45.259,30.310,-17.547)
N7: (-45.511,33.554,-16.000)
N9: (-43.998,31.956,-16.259)
O5': (-42.017,34.663,-14.614)
O3': (-39.814,33.032,-17.380)
OP2: (-43.664,36.457,-13.906)
C3': (-41.060,32.839,-16.774)
C1': (-42.698,31.305,-16.093)
C5': (-40.879,33.837,-14.421)
O6: (-48.252,33.110,-17.212)
O4': (-42.108,31.833,-14.934)
C8: (-44.297,33.186,-15.733)
C2: (-46.463,30.156,-18.084)
C6: (-47.315,32.313,-17.292)
C5: (-46.029,32.485,-16.732)
C4: (-45.112,31.482,-16.897)
P: (-42.351,35.830,-13.578)
C4': (-40.937,32.604,-15.279)
C2': (-41.762,31.592,-17.254)
O2': (-40.853,30.520,-17.363)
N1: (-47.453,31.103,-17.978)
N2: (-46.765,29.039,-18.771)
N3: (-45.259,30.310,-17.547)
N7: (-45.511,33.554,-16.000)
N9: (-43.998,31.956,-16.259)
O5': (-42.017,34.663,-14.614)
O3': (-39.814,33.032,-17.380)
Image (generated by PyMOL):