Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1085:A1084
Extra
PDB:
ATOM 1 O3' G A1084 -120.731 -55.043 -54.709 1.00 98.10 O
ATOM 2 P C A1085 -119.831 -54.026 -53.847 1.00106.80 P
ATOM 3 OP1 C A1085 -120.361 -54.036 -52.453 1.00106.80 O
ATOM 4 OP2 C A1085 -119.793 -52.741 -54.590 1.00106.80 O
ATOM 5 O5' C A1085 -118.396 -54.713 -53.886 1.00106.80 O
ATOM 6 C5' C A1085 -118.158 -55.861 -54.683 1.00106.80 C
ATOM 7 C4' C A1085 -117.288 -55.547 -55.877 1.00106.80 C
ATOM 8 O4' C A1085 -117.926 -56.042 -57.092 1.00106.80 O
ATOM 9 C3' C A1085 -117.040 -54.069 -56.186 1.00106.80 C
ATOM 10 O3' C A1085 -116.074 -53.446 -55.329 1.00106.80 O
ATOM 11 C2' C A1085 -116.619 -54.133 -57.656 1.00106.80 C
ATOM 12 O2' C A1085 -115.274 -54.588 -57.785 1.00106.80 O
ATOM 13 C1' C A1085 -117.559 -55.222 -58.191 1.00106.80 C
ATOM 14 N1 C A1085 -118.795 -54.647 -58.821 1.00104.98 N
ATOM 15 C2 C A1085 -118.993 -54.802 -60.213 1.00104.98 C
ATOM 16 O2 C A1085 -118.162 -55.431 -60.893 1.00104.98 O
ATOM 17 N3 C A1085 -120.098 -54.271 -60.801 1.00104.98 N
ATOM 18 C4 C A1085 -120.992 -53.595 -60.075 1.00104.98 C
ATOM 19 N4 C A1085 -122.066 -53.090 -60.693 1.00104.98 N
ATOM 20 C5 C A1085 -120.819 -53.412 -58.673 1.00104.98 C
ATOM 21 C6 C A1085 -119.725 -53.937 -58.093 1.00104.98 C
ATOM 22 P G A1086 -116.172 -51.857 -54.972 1.00115.01 P
ATOM 23 OP1 G A1086 -114.801 -51.403 -54.609 1.00115.01 O
ATOM 24 OP2 G A1086 -117.258 -51.695 -53.972 1.00115.01 O
ATOM 25 O5' G A1086 -116.614 -51.194 -56.357 1.00115.01 O
TER
ATOM 1 O3' A B1083 -126.628 -55.368 -52.120 1.00127.75 O
ATOM 2 P G B1084 -125.216 -54.776 -52.646 1.00 98.10 P
ATOM 3 OP1 G B1084 -124.236 -54.923 -51.525 1.00 98.10 O
ATOM 4 OP2 G B1084 -125.485 -53.416 -53.190 1.00 98.10 O
ATOM 5 O5' G B1084 -124.832 -55.762 -53.844 1.00 98.10 O
ATOM 6 C5' G B1084 -123.850 -56.781 -53.676 1.00 98.10 C
ATOM 7 C4' G B1084 -122.637 -56.522 -54.531 1.00 98.10 C
ATOM 8 O4' G B1084 -122.955 -56.845 -55.912 1.00 98.10 O
ATOM 9 C3' G B1084 -122.151 -55.073 -54.540 1.00 98.10 C
ATOM 10 O3' G B1084 -120.731 -55.043 -54.709 1.00 98.10 O
ATOM 11 C2' G B1084 -122.827 -54.510 -55.781 1.00 98.10 C
ATOM 12 O2' G B1084 -122.207 -53.365 -56.328 1.00 98.10 O
ATOM 13 C1' G B1084 -122.751 -55.705 -56.722 1.00 98.10 C
ATOM 14 N9 G B1084 -123.766 -55.698 -57.765 1.00 96.75 N
ATOM 15 C8 G B1084 -125.092 -55.397 -57.594 1.00 96.75 C
ATOM 16 N7 G B1084 -125.755 -55.457 -58.710 1.00 96.75 N
ATOM 17 C5 G B1084 -124.806 -55.813 -59.660 1.00 96.75 C
ATOM 18 C6 G B1084 -124.938 -56.026 -61.049 1.00 96.75 C
ATOM 19 O6 G B1084 -125.964 -55.938 -61.723 1.00 96.75 O
ATOM 20 N1 G B1084 -123.734 -56.372 -61.655 1.00 96.75 N
ATOM 21 C2 G B1084 -122.536 -56.504 -61.009 1.00 96.75 C
ATOM 22 N2 G B1084 -121.478 -56.850 -61.761 1.00 96.75 N
ATOM 23 N3 G B1084 -122.400 -56.307 -59.705 1.00 96.75 N
ATOM 24 C4 G B1084 -123.565 -55.965 -59.099 1.00 96.75 C
ATOM 25 P C B1085 -119.831 -54.026 -53.847 1.00106.80 P
ATOM 26 OP1 C B1085 -120.361 -54.036 -52.453 1.00106.80 O
ATOM 27 OP2 C B1085 -119.793 -52.741 -54.590 1.00106.80 O
ATOM 28 O5' C B1085 -118.396 -54.713 -53.886 1.00106.80 O
TER
ATOM 2 P C A1085 -119.831 -54.026 -53.847 1.00106.80 P
ATOM 3 OP1 C A1085 -120.361 -54.036 -52.453 1.00106.80 O
ATOM 4 OP2 C A1085 -119.793 -52.741 -54.590 1.00106.80 O
ATOM 5 O5' C A1085 -118.396 -54.713 -53.886 1.00106.80 O
ATOM 6 C5' C A1085 -118.158 -55.861 -54.683 1.00106.80 C
ATOM 7 C4' C A1085 -117.288 -55.547 -55.877 1.00106.80 C
ATOM 8 O4' C A1085 -117.926 -56.042 -57.092 1.00106.80 O
ATOM 9 C3' C A1085 -117.040 -54.069 -56.186 1.00106.80 C
ATOM 10 O3' C A1085 -116.074 -53.446 -55.329 1.00106.80 O
ATOM 11 C2' C A1085 -116.619 -54.133 -57.656 1.00106.80 C
ATOM 12 O2' C A1085 -115.274 -54.588 -57.785 1.00106.80 O
ATOM 13 C1' C A1085 -117.559 -55.222 -58.191 1.00106.80 C
ATOM 14 N1 C A1085 -118.795 -54.647 -58.821 1.00104.98 N
ATOM 15 C2 C A1085 -118.993 -54.802 -60.213 1.00104.98 C
ATOM 16 O2 C A1085 -118.162 -55.431 -60.893 1.00104.98 O
ATOM 17 N3 C A1085 -120.098 -54.271 -60.801 1.00104.98 N
ATOM 18 C4 C A1085 -120.992 -53.595 -60.075 1.00104.98 C
ATOM 19 N4 C A1085 -122.066 -53.090 -60.693 1.00104.98 N
ATOM 20 C5 C A1085 -120.819 -53.412 -58.673 1.00104.98 C
ATOM 21 C6 C A1085 -119.725 -53.937 -58.093 1.00104.98 C
ATOM 22 P G A1086 -116.172 -51.857 -54.972 1.00115.01 P
ATOM 23 OP1 G A1086 -114.801 -51.403 -54.609 1.00115.01 O
ATOM 24 OP2 G A1086 -117.258 -51.695 -53.972 1.00115.01 O
ATOM 25 O5' G A1086 -116.614 -51.194 -56.357 1.00115.01 O
TER
ATOM 1 O3' A B1083 -126.628 -55.368 -52.120 1.00127.75 O
ATOM 2 P G B1084 -125.216 -54.776 -52.646 1.00 98.10 P
ATOM 3 OP1 G B1084 -124.236 -54.923 -51.525 1.00 98.10 O
ATOM 4 OP2 G B1084 -125.485 -53.416 -53.190 1.00 98.10 O
ATOM 5 O5' G B1084 -124.832 -55.762 -53.844 1.00 98.10 O
ATOM 6 C5' G B1084 -123.850 -56.781 -53.676 1.00 98.10 C
ATOM 7 C4' G B1084 -122.637 -56.522 -54.531 1.00 98.10 C
ATOM 8 O4' G B1084 -122.955 -56.845 -55.912 1.00 98.10 O
ATOM 9 C3' G B1084 -122.151 -55.073 -54.540 1.00 98.10 C
ATOM 10 O3' G B1084 -120.731 -55.043 -54.709 1.00 98.10 O
ATOM 11 C2' G B1084 -122.827 -54.510 -55.781 1.00 98.10 C
ATOM 12 O2' G B1084 -122.207 -53.365 -56.328 1.00 98.10 O
ATOM 13 C1' G B1084 -122.751 -55.705 -56.722 1.00 98.10 C
ATOM 14 N9 G B1084 -123.766 -55.698 -57.765 1.00 96.75 N
ATOM 15 C8 G B1084 -125.092 -55.397 -57.594 1.00 96.75 C
ATOM 16 N7 G B1084 -125.755 -55.457 -58.710 1.00 96.75 N
ATOM 17 C5 G B1084 -124.806 -55.813 -59.660 1.00 96.75 C
ATOM 18 C6 G B1084 -124.938 -56.026 -61.049 1.00 96.75 C
ATOM 19 O6 G B1084 -125.964 -55.938 -61.723 1.00 96.75 O
ATOM 20 N1 G B1084 -123.734 -56.372 -61.655 1.00 96.75 N
ATOM 21 C2 G B1084 -122.536 -56.504 -61.009 1.00 96.75 C
ATOM 22 N2 G B1084 -121.478 -56.850 -61.761 1.00 96.75 N
ATOM 23 N3 G B1084 -122.400 -56.307 -59.705 1.00 96.75 N
ATOM 24 C4 G B1084 -123.565 -55.965 -59.099 1.00 96.75 C
ATOM 25 P C B1085 -119.831 -54.026 -53.847 1.00106.80 P
ATOM 26 OP1 C B1085 -120.361 -54.036 -52.453 1.00106.80 O
ATOM 27 OP2 C B1085 -119.793 -52.741 -54.590 1.00106.80 O
ATOM 28 O5' C B1085 -118.396 -54.713 -53.886 1.00106.80 O
TER
Atoms:
C2: (-118.993,-54.802,-60.213)
OP1: (-120.361,-54.036,-52.453)
OP2: (-119.793,-52.741,-54.590)
C4: (-120.992,-53.595,-60.075)
O5': (-118.396,-54.713,-53.886)
C3': (-117.040,-54.069,-56.186)
C1': (-117.559,-55.222,-58.191)
O4': (-117.926,-56.042,-57.092)
C5': (-118.158,-55.861,-54.683)
P: (-119.831,-54.026,-53.847)
O2: (-118.162,-55.431,-60.893)
C4': (-117.288,-55.547,-55.877)
C2': (-116.619,-54.133,-57.656)
O2': (-115.274,-54.588,-57.785)
N1: (-118.795,-54.647,-58.821)
N3: (-120.098,-54.271,-60.801)
N4: (-122.066,-53.090,-60.693)
C6: (-119.725,-53.937,-58.093)
C5: (-120.819,-53.412,-58.673)
O3': (-116.074,-53.446,-55.329)
OP1: (-120.361,-54.036,-52.453)
OP2: (-119.793,-52.741,-54.590)
C4: (-120.992,-53.595,-60.075)
O5': (-118.396,-54.713,-53.886)
C3': (-117.040,-54.069,-56.186)
C1': (-117.559,-55.222,-58.191)
O4': (-117.926,-56.042,-57.092)
C5': (-118.158,-55.861,-54.683)
P: (-119.831,-54.026,-53.847)
O2: (-118.162,-55.431,-60.893)
C4': (-117.288,-55.547,-55.877)
C2': (-116.619,-54.133,-57.656)
O2': (-115.274,-54.588,-57.785)
N1: (-118.795,-54.647,-58.821)
N3: (-120.098,-54.271,-60.801)
N4: (-122.066,-53.090,-60.693)
C6: (-119.725,-53.937,-58.093)
C5: (-120.819,-53.412,-58.673)
O3': (-116.074,-53.446,-55.329)
OP1: (-124.236,-54.923,-51.525)
OP2: (-125.485,-53.416,-53.190)
C3': (-122.151,-55.073,-54.540)
C1': (-122.751,-55.705,-56.722)
C5': (-123.850,-56.781,-53.676)
O6: (-125.964,-55.938,-61.723)
O4': (-122.955,-56.845,-55.912)
C8: (-125.092,-55.397,-57.594)
C2: (-122.536,-56.504,-61.009)
C6: (-124.938,-56.026,-61.049)
C5: (-124.806,-55.813,-59.660)
C4: (-123.565,-55.965,-59.099)
P: (-125.216,-54.776,-52.646)
C4': (-122.637,-56.522,-54.531)
C2': (-122.827,-54.510,-55.781)
O2': (-122.207,-53.365,-56.328)
N1: (-123.734,-56.372,-61.655)
N2: (-121.478,-56.850,-61.761)
N3: (-122.400,-56.307,-59.705)
N7: (-125.755,-55.457,-58.710)
N9: (-123.766,-55.698,-57.765)
O5': (-124.832,-55.762,-53.844)
O3': (-120.731,-55.043,-54.709)
OP2: (-125.485,-53.416,-53.190)
C3': (-122.151,-55.073,-54.540)
C1': (-122.751,-55.705,-56.722)
C5': (-123.850,-56.781,-53.676)
O6: (-125.964,-55.938,-61.723)
O4': (-122.955,-56.845,-55.912)
C8: (-125.092,-55.397,-57.594)
C2: (-122.536,-56.504,-61.009)
C6: (-124.938,-56.026,-61.049)
C5: (-124.806,-55.813,-59.660)
C4: (-123.565,-55.965,-59.099)
P: (-125.216,-54.776,-52.646)
C4': (-122.637,-56.522,-54.531)
C2': (-122.827,-54.510,-55.781)
O2': (-122.207,-53.365,-56.328)
N1: (-123.734,-56.372,-61.655)
N2: (-121.478,-56.850,-61.761)
N3: (-122.400,-56.307,-59.705)
N7: (-125.755,-55.457,-58.710)
N9: (-123.766,-55.698,-57.765)
O5': (-124.832,-55.762,-53.844)
O3': (-120.731,-55.043,-54.709)
Image (generated by PyMOL):