Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2641:A2640
Extra
PDB:
ATOM 1 O3' G A2640 -52.772 72.376 160.026 1.00 10.58 O
ATOM 2 P C A2641 -53.916 71.263 159.874 1.00 12.12 P
ATOM 3 OP1 C A2641 -54.871 71.758 158.855 1.00 12.12 O
ATOM 4 OP2 C A2641 -54.422 70.946 161.233 1.00 12.12 O
ATOM 5 O5' C A2641 -53.111 70.024 159.316 1.00 12.12 O
ATOM 6 C5' C A2641 -52.036 70.210 158.436 1.00 12.12 C
ATOM 7 C4' C A2641 -50.938 69.253 158.744 1.00 12.12 C
ATOM 8 O4' C A2641 -50.286 69.665 159.957 1.00 12.12 O
ATOM 9 C3' C A2641 -51.370 67.822 159.022 1.00 12.12 C
ATOM 10 O3' C A2641 -51.580 67.068 157.833 1.00 12.12 O
ATOM 11 C2' C A2641 -50.236 67.288 159.895 1.00 12.12 C
ATOM 12 O2' C A2641 -49.127 66.861 159.110 1.00 12.12 O
ATOM 13 C1' C A2641 -49.826 68.536 160.666 1.00 12.12 C
ATOM 14 N1 C A2641 -50.389 68.563 162.011 1.00 11.90 N
ATOM 15 C2 C A2641 -49.968 67.567 162.823 1.00 11.90 C
ATOM 16 O2 C A2641 -49.181 66.762 162.318 1.00 11.90 O
ATOM 17 N3 C A2641 -50.432 67.520 164.081 1.00 11.90 N
ATOM 18 C4 C A2641 -51.275 68.447 164.529 1.00 11.90 C
ATOM 19 N4 C A2641 -51.694 68.383 165.788 1.00 11.90 N
ATOM 20 C5 C A2641 -51.718 69.500 163.706 1.00 11.90 C
ATOM 21 C6 C A2641 -51.248 69.513 162.456 1.00 11.90 C
ATOM 22 P U A2642 -52.733 65.950 157.775 1.00 29.47 P
ATOM 23 OP1 U A2642 -53.002 65.671 156.334 1.00 29.47 O
ATOM 24 OP2 U A2642 -53.846 66.430 158.624 1.00 29.47 O
ATOM 25 O5' U A2642 -52.031 64.689 158.459 1.00 29.47 O
TER
ATOM 1 O3' U B2639 -54.635 75.458 165.255 1.00 7.61 O
ATOM 2 P G B2640 -54.699 73.907 164.800 1.00 10.58 P
ATOM 3 OP1 G B2640 -55.959 73.729 164.042 1.00 10.58 O
ATOM 4 OP2 G B2640 -54.467 73.078 166.013 1.00 10.58 O
ATOM 5 O5' G B2640 -53.456 73.777 163.814 1.00 10.58 O
ATOM 6 C5' G B2640 -53.472 74.343 162.508 1.00 10.58 C
ATOM 7 C4' G B2640 -52.209 73.996 161.753 1.00 10.58 C
ATOM 8 O4' G B2640 -51.053 74.147 162.632 1.00 10.58 O
ATOM 9 C3' G B2640 -52.116 72.564 161.261 1.00 10.58 C
ATOM 10 O3' G B2640 -52.772 72.376 160.026 1.00 10.58 O
ATOM 11 C2' G B2640 -50.612 72.306 161.207 1.00 10.58 C
ATOM 12 O2' G B2640 -50.047 72.838 160.032 1.00 10.58 O
ATOM 13 C1' G B2640 -50.112 73.118 162.391 1.00 10.58 C
ATOM 14 N9 G B2640 -50.007 72.303 163.600 1.00 10.20 N
ATOM 15 C8 G B2640 -50.789 72.472 164.697 1.00 10.20 C
ATOM 16 N7 G B2640 -50.532 71.618 165.649 1.00 10.20 N
ATOM 17 C5 G B2640 -49.504 70.844 165.141 1.00 10.20 C
ATOM 18 C6 G B2640 -48.812 69.756 165.741 1.00 10.20 C
ATOM 19 O6 G B2640 -48.989 69.254 166.865 1.00 10.20 O
ATOM 20 N1 G B2640 -47.839 69.242 164.898 1.00 10.20 N
ATOM 21 C2 G B2640 -47.580 69.699 163.640 1.00 10.20 C
ATOM 22 N2 G B2640 -46.607 69.050 162.993 1.00 10.20 N
ATOM 23 N3 G B2640 -48.224 70.714 163.067 1.00 10.20 N
ATOM 24 C4 G B2640 -49.171 71.250 163.869 1.00 10.20 C
ATOM 25 P C B2641 -53.916 71.263 159.874 1.00 12.12 P
ATOM 26 OP1 C B2641 -54.871 71.758 158.855 1.00 12.12 O
ATOM 27 OP2 C B2641 -54.422 70.946 161.233 1.00 12.12 O
ATOM 28 O5' C B2641 -53.111 70.024 159.316 1.00 12.12 O
TER
ATOM 2 P C A2641 -53.916 71.263 159.874 1.00 12.12 P
ATOM 3 OP1 C A2641 -54.871 71.758 158.855 1.00 12.12 O
ATOM 4 OP2 C A2641 -54.422 70.946 161.233 1.00 12.12 O
ATOM 5 O5' C A2641 -53.111 70.024 159.316 1.00 12.12 O
ATOM 6 C5' C A2641 -52.036 70.210 158.436 1.00 12.12 C
ATOM 7 C4' C A2641 -50.938 69.253 158.744 1.00 12.12 C
ATOM 8 O4' C A2641 -50.286 69.665 159.957 1.00 12.12 O
ATOM 9 C3' C A2641 -51.370 67.822 159.022 1.00 12.12 C
ATOM 10 O3' C A2641 -51.580 67.068 157.833 1.00 12.12 O
ATOM 11 C2' C A2641 -50.236 67.288 159.895 1.00 12.12 C
ATOM 12 O2' C A2641 -49.127 66.861 159.110 1.00 12.12 O
ATOM 13 C1' C A2641 -49.826 68.536 160.666 1.00 12.12 C
ATOM 14 N1 C A2641 -50.389 68.563 162.011 1.00 11.90 N
ATOM 15 C2 C A2641 -49.968 67.567 162.823 1.00 11.90 C
ATOM 16 O2 C A2641 -49.181 66.762 162.318 1.00 11.90 O
ATOM 17 N3 C A2641 -50.432 67.520 164.081 1.00 11.90 N
ATOM 18 C4 C A2641 -51.275 68.447 164.529 1.00 11.90 C
ATOM 19 N4 C A2641 -51.694 68.383 165.788 1.00 11.90 N
ATOM 20 C5 C A2641 -51.718 69.500 163.706 1.00 11.90 C
ATOM 21 C6 C A2641 -51.248 69.513 162.456 1.00 11.90 C
ATOM 22 P U A2642 -52.733 65.950 157.775 1.00 29.47 P
ATOM 23 OP1 U A2642 -53.002 65.671 156.334 1.00 29.47 O
ATOM 24 OP2 U A2642 -53.846 66.430 158.624 1.00 29.47 O
ATOM 25 O5' U A2642 -52.031 64.689 158.459 1.00 29.47 O
TER
ATOM 1 O3' U B2639 -54.635 75.458 165.255 1.00 7.61 O
ATOM 2 P G B2640 -54.699 73.907 164.800 1.00 10.58 P
ATOM 3 OP1 G B2640 -55.959 73.729 164.042 1.00 10.58 O
ATOM 4 OP2 G B2640 -54.467 73.078 166.013 1.00 10.58 O
ATOM 5 O5' G B2640 -53.456 73.777 163.814 1.00 10.58 O
ATOM 6 C5' G B2640 -53.472 74.343 162.508 1.00 10.58 C
ATOM 7 C4' G B2640 -52.209 73.996 161.753 1.00 10.58 C
ATOM 8 O4' G B2640 -51.053 74.147 162.632 1.00 10.58 O
ATOM 9 C3' G B2640 -52.116 72.564 161.261 1.00 10.58 C
ATOM 10 O3' G B2640 -52.772 72.376 160.026 1.00 10.58 O
ATOM 11 C2' G B2640 -50.612 72.306 161.207 1.00 10.58 C
ATOM 12 O2' G B2640 -50.047 72.838 160.032 1.00 10.58 O
ATOM 13 C1' G B2640 -50.112 73.118 162.391 1.00 10.58 C
ATOM 14 N9 G B2640 -50.007 72.303 163.600 1.00 10.20 N
ATOM 15 C8 G B2640 -50.789 72.472 164.697 1.00 10.20 C
ATOM 16 N7 G B2640 -50.532 71.618 165.649 1.00 10.20 N
ATOM 17 C5 G B2640 -49.504 70.844 165.141 1.00 10.20 C
ATOM 18 C6 G B2640 -48.812 69.756 165.741 1.00 10.20 C
ATOM 19 O6 G B2640 -48.989 69.254 166.865 1.00 10.20 O
ATOM 20 N1 G B2640 -47.839 69.242 164.898 1.00 10.20 N
ATOM 21 C2 G B2640 -47.580 69.699 163.640 1.00 10.20 C
ATOM 22 N2 G B2640 -46.607 69.050 162.993 1.00 10.20 N
ATOM 23 N3 G B2640 -48.224 70.714 163.067 1.00 10.20 N
ATOM 24 C4 G B2640 -49.171 71.250 163.869 1.00 10.20 C
ATOM 25 P C B2641 -53.916 71.263 159.874 1.00 12.12 P
ATOM 26 OP1 C B2641 -54.871 71.758 158.855 1.00 12.12 O
ATOM 27 OP2 C B2641 -54.422 70.946 161.233 1.00 12.12 O
ATOM 28 O5' C B2641 -53.111 70.024 159.316 1.00 12.12 O
TER
Atoms:
C2: (-49.968,67.567,162.823)
OP1: (-54.871,71.758,158.855)
OP2: (-54.422,70.946,161.233)
C4: (-51.275,68.447,164.529)
O5': (-53.111,70.024,159.316)
C3': (-51.370,67.822,159.022)
C1': (-49.826,68.536,160.666)
O4': (-50.286,69.665,159.957)
C5': (-52.036,70.210,158.436)
P: (-53.916,71.263,159.874)
O2: (-49.181,66.762,162.318)
C4': (-50.938,69.253,158.744)
C2': (-50.236,67.288,159.895)
O2': (-49.127,66.861,159.110)
N1: (-50.389,68.563,162.011)
N3: (-50.432,67.520,164.081)
N4: (-51.694,68.383,165.788)
C6: (-51.248,69.513,162.456)
C5: (-51.718,69.500,163.706)
O3': (-51.580,67.068,157.833)
OP1: (-54.871,71.758,158.855)
OP2: (-54.422,70.946,161.233)
C4: (-51.275,68.447,164.529)
O5': (-53.111,70.024,159.316)
C3': (-51.370,67.822,159.022)
C1': (-49.826,68.536,160.666)
O4': (-50.286,69.665,159.957)
C5': (-52.036,70.210,158.436)
P: (-53.916,71.263,159.874)
O2: (-49.181,66.762,162.318)
C4': (-50.938,69.253,158.744)
C2': (-50.236,67.288,159.895)
O2': (-49.127,66.861,159.110)
N1: (-50.389,68.563,162.011)
N3: (-50.432,67.520,164.081)
N4: (-51.694,68.383,165.788)
C6: (-51.248,69.513,162.456)
C5: (-51.718,69.500,163.706)
O3': (-51.580,67.068,157.833)
OP1: (-55.959,73.729,164.042)
OP2: (-54.467,73.078,166.013)
C3': (-52.116,72.564,161.261)
C1': (-50.112,73.118,162.391)
C5': (-53.472,74.343,162.508)
O6: (-48.989,69.254,166.865)
O4': (-51.053,74.147,162.632)
C8: (-50.789,72.472,164.697)
C2: (-47.580,69.699,163.640)
C6: (-48.812,69.756,165.741)
C5: (-49.504,70.844,165.141)
C4: (-49.171,71.250,163.869)
P: (-54.699,73.907,164.800)
C4': (-52.209,73.996,161.753)
C2': (-50.612,72.306,161.207)
O2': (-50.047,72.838,160.032)
N1: (-47.839,69.242,164.898)
N2: (-46.607,69.050,162.993)
N3: (-48.224,70.714,163.067)
N7: (-50.532,71.618,165.649)
N9: (-50.007,72.303,163.600)
O5': (-53.456,73.777,163.814)
O3': (-52.772,72.376,160.026)
OP2: (-54.467,73.078,166.013)
C3': (-52.116,72.564,161.261)
C1': (-50.112,73.118,162.391)
C5': (-53.472,74.343,162.508)
O6: (-48.989,69.254,166.865)
O4': (-51.053,74.147,162.632)
C8: (-50.789,72.472,164.697)
C2: (-47.580,69.699,163.640)
C6: (-48.812,69.756,165.741)
C5: (-49.504,70.844,165.141)
C4: (-49.171,71.250,163.869)
P: (-54.699,73.907,164.800)
C4': (-52.209,73.996,161.753)
C2': (-50.612,72.306,161.207)
O2': (-50.047,72.838,160.032)
N1: (-47.839,69.242,164.898)
N2: (-46.607,69.050,162.993)
N3: (-48.224,70.714,163.067)
N7: (-50.532,71.618,165.649)
N9: (-50.007,72.303,163.600)
O5': (-53.456,73.777,163.814)
O3': (-52.772,72.376,160.026)
Image (generated by PyMOL):