Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A24:A23
Extra
PDB:
ATOM 1 O3' G A 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 2 P C A 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 3 OP1 C A 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 4 OP2 C A 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 5 O5' C A 24 5.569 -11.758 -28.929 1.00 39.85 O
ATOM 6 C5' C A 24 4.157 -11.821 -29.067 1.00 48.52 C
ATOM 7 C4' C A 24 3.748 -12.839 -30.102 1.00 49.93 C
ATOM 8 O4' C A 24 4.016 -12.322 -31.433 1.00 50.73 O
ATOM 9 C3' C A 24 4.495 -14.164 -30.070 1.00 54.64 C
ATOM 10 O3' C A 24 4.012 -15.054 -29.078 1.00 59.52 O
ATOM 11 C2' C A 24 4.313 -14.677 -31.490 1.00 52.93 C
ATOM 12 O2' C A 24 3.013 -15.218 -31.666 1.00 51.68 O
ATOM 13 C1' C A 24 4.407 -13.377 -32.288 1.00 50.61 C
ATOM 14 N1 C A 24 5.785 -13.120 -32.756 1.00 50.17 N
ATOM 15 C2 C A 24 6.257 -13.876 -33.830 1.00 53.16 C
ATOM 16 O2 C A 24 5.503 -14.717 -34.340 1.00 56.89 O
ATOM 17 N3 C A 24 7.514 -13.674 -34.283 1.00 51.71 N
ATOM 18 C4 C A 24 8.289 -12.759 -33.702 1.00 50.40 C
ATOM 19 N4 C A 24 9.523 -12.594 -34.184 1.00 54.20 N
ATOM 20 C5 C A 24 7.834 -11.973 -32.602 1.00 47.30 C
ATOM 21 C6 C A 24 6.585 -12.184 -32.163 1.00 48.83 C
ATOM 22 P A A 25 4.960 -16.226 -28.517 1.00 63.67 P
ATOM 23 OP1 A A 25 4.278 -16.810 -27.336 1.00 62.02 O
ATOM 24 OP2 A A 25 6.316 -15.648 -28.343 1.00 60.08 O
ATOM 25 O5' A A 25 4.969 -17.280 -29.713 1.00 63.01 O
TER
ATOM 1 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 2 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 3 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 4 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 5 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
ATOM 6 C5' G B 23 3.602 -8.964 -31.583 1.00 44.12 C
ATOM 7 C4' G B 23 5.001 -8.397 -31.642 1.00 41.75 C
ATOM 8 O4' G B 23 4.946 -6.983 -31.974 1.00 39.30 O
ATOM 9 C3' G B 23 5.793 -8.442 -30.343 1.00 42.00 C
ATOM 10 O3' G B 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 11 C2' G B 23 6.799 -7.312 -30.526 1.00 38.10 C
ATOM 12 O2' G B 23 7.870 -7.724 -31.363 1.00 40.91 O
ATOM 13 C1' G B 23 5.965 -6.285 -31.289 1.00 33.59 C
ATOM 14 N9 G B 23 5.335 -5.301 -30.387 1.00 39.94 N
ATOM 15 C8 G B 23 4.165 -5.449 -29.679 1.00 42.31 C
ATOM 16 N7 G B 23 3.859 -4.397 -28.967 1.00 41.88 N
ATOM 17 C5 G B 23 4.885 -3.498 -29.225 1.00 40.96 C
ATOM 18 C6 G B 23 5.099 -2.183 -28.738 1.00 40.27 C
ATOM 19 O6 G B 23 4.402 -1.527 -27.954 1.00 43.94 O
ATOM 20 N1 G B 23 6.264 -1.627 -29.254 1.00 42.30 N
ATOM 21 C2 G B 23 7.118 -2.256 -30.127 1.00 41.99 C
ATOM 22 N2 G B 23 8.195 -1.555 -30.514 1.00 39.35 N
ATOM 23 N3 G B 23 6.928 -3.481 -30.590 1.00 41.05 N
ATOM 24 C4 G B 23 5.801 -4.039 -30.101 1.00 41.11 C
ATOM 25 P C B 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 26 OP1 C B 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 27 OP2 C B 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 28 O5' C B 24 5.569 -11.758 -28.929 1.00 39.85 O
TER
ATOM 2 P C A 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 3 OP1 C A 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 4 OP2 C A 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 5 O5' C A 24 5.569 -11.758 -28.929 1.00 39.85 O
ATOM 6 C5' C A 24 4.157 -11.821 -29.067 1.00 48.52 C
ATOM 7 C4' C A 24 3.748 -12.839 -30.102 1.00 49.93 C
ATOM 8 O4' C A 24 4.016 -12.322 -31.433 1.00 50.73 O
ATOM 9 C3' C A 24 4.495 -14.164 -30.070 1.00 54.64 C
ATOM 10 O3' C A 24 4.012 -15.054 -29.078 1.00 59.52 O
ATOM 11 C2' C A 24 4.313 -14.677 -31.490 1.00 52.93 C
ATOM 12 O2' C A 24 3.013 -15.218 -31.666 1.00 51.68 O
ATOM 13 C1' C A 24 4.407 -13.377 -32.288 1.00 50.61 C
ATOM 14 N1 C A 24 5.785 -13.120 -32.756 1.00 50.17 N
ATOM 15 C2 C A 24 6.257 -13.876 -33.830 1.00 53.16 C
ATOM 16 O2 C A 24 5.503 -14.717 -34.340 1.00 56.89 O
ATOM 17 N3 C A 24 7.514 -13.674 -34.283 1.00 51.71 N
ATOM 18 C4 C A 24 8.289 -12.759 -33.702 1.00 50.40 C
ATOM 19 N4 C A 24 9.523 -12.594 -34.184 1.00 54.20 N
ATOM 20 C5 C A 24 7.834 -11.973 -32.602 1.00 47.30 C
ATOM 21 C6 C A 24 6.585 -12.184 -32.163 1.00 48.83 C
ATOM 22 P A A 25 4.960 -16.226 -28.517 1.00 63.67 P
ATOM 23 OP1 A A 25 4.278 -16.810 -27.336 1.00 62.02 O
ATOM 24 OP2 A A 25 6.316 -15.648 -28.343 1.00 60.08 O
ATOM 25 O5' A A 25 4.969 -17.280 -29.713 1.00 63.01 O
TER
ATOM 1 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 2 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 3 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 4 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 5 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
ATOM 6 C5' G B 23 3.602 -8.964 -31.583 1.00 44.12 C
ATOM 7 C4' G B 23 5.001 -8.397 -31.642 1.00 41.75 C
ATOM 8 O4' G B 23 4.946 -6.983 -31.974 1.00 39.30 O
ATOM 9 C3' G B 23 5.793 -8.442 -30.343 1.00 42.00 C
ATOM 10 O3' G B 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 11 C2' G B 23 6.799 -7.312 -30.526 1.00 38.10 C
ATOM 12 O2' G B 23 7.870 -7.724 -31.363 1.00 40.91 O
ATOM 13 C1' G B 23 5.965 -6.285 -31.289 1.00 33.59 C
ATOM 14 N9 G B 23 5.335 -5.301 -30.387 1.00 39.94 N
ATOM 15 C8 G B 23 4.165 -5.449 -29.679 1.00 42.31 C
ATOM 16 N7 G B 23 3.859 -4.397 -28.967 1.00 41.88 N
ATOM 17 C5 G B 23 4.885 -3.498 -29.225 1.00 40.96 C
ATOM 18 C6 G B 23 5.099 -2.183 -28.738 1.00 40.27 C
ATOM 19 O6 G B 23 4.402 -1.527 -27.954 1.00 43.94 O
ATOM 20 N1 G B 23 6.264 -1.627 -29.254 1.00 42.30 N
ATOM 21 C2 G B 23 7.118 -2.256 -30.127 1.00 41.99 C
ATOM 22 N2 G B 23 8.195 -1.555 -30.514 1.00 39.35 N
ATOM 23 N3 G B 23 6.928 -3.481 -30.590 1.00 41.05 N
ATOM 24 C4 G B 23 5.801 -4.039 -30.101 1.00 41.11 C
ATOM 25 P C B 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 26 OP1 C B 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 27 OP2 C B 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 28 O5' C B 24 5.569 -11.758 -28.929 1.00 39.85 O
TER
Atoms:
C2: (6.257,-13.876,-33.830)
OP1: (5.436,-9.505,-27.812)
OP2: (7.694,-10.627,-28.194)
C4: (8.289,-12.759,-33.702)
O5': (5.569,-11.758,-28.929)
C3': (4.495,-14.164,-30.070)
C1': (4.407,-13.377,-32.288)
O4': (4.016,-12.322,-31.433)
C5': (4.157,-11.821,-29.067)
P: (6.303,-10.375,-28.642)
O2: (5.503,-14.717,-34.340)
C4': (3.748,-12.839,-30.102)
C2': (4.313,-14.677,-31.490)
O2': (3.013,-15.218,-31.666)
N1: (5.785,-13.120,-32.756)
N3: (7.514,-13.674,-34.283)
N4: (9.523,-12.594,-34.184)
C6: (6.585,-12.184,-32.163)
C5: (7.834,-11.973,-32.602)
O3': (4.012,-15.054,-29.078)
OP1: (5.436,-9.505,-27.812)
OP2: (7.694,-10.627,-28.194)
C4: (8.289,-12.759,-33.702)
O5': (5.569,-11.758,-28.929)
C3': (4.495,-14.164,-30.070)
C1': (4.407,-13.377,-32.288)
O4': (4.016,-12.322,-31.433)
C5': (4.157,-11.821,-29.067)
P: (6.303,-10.375,-28.642)
O2: (5.503,-14.717,-34.340)
C4': (3.748,-12.839,-30.102)
C2': (4.313,-14.677,-31.490)
O2': (3.013,-15.218,-31.666)
N1: (5.785,-13.120,-32.756)
N3: (7.514,-13.674,-34.283)
N4: (9.523,-12.594,-34.184)
C6: (6.585,-12.184,-32.163)
C5: (7.834,-11.973,-32.602)
O3': (4.012,-15.054,-29.078)
OP1: (1.075,-10.091,-30.517)
OP2: (0.703,-7.878,-29.304)
C3': (5.793,-8.442,-30.343)
C1': (5.965,-6.285,-31.289)
C5': (3.602,-8.964,-31.583)
O6: (4.402,-1.527,-27.954)
O4': (4.946,-6.983,-31.974)
C8: (4.165,-5.449,-29.679)
C2: (7.118,-2.256,-30.127)
C6: (5.099,-2.183,-28.738)
C5: (4.885,-3.498,-29.225)
C4: (5.801,-4.039,-30.101)
P: (1.254,-8.619,-30.464)
C4': (5.001,-8.397,-31.642)
C2': (6.799,-7.312,-30.526)
O2': (7.870,-7.724,-31.363)
N1: (6.264,-1.627,-29.254)
N2: (8.195,-1.555,-30.514)
N3: (6.928,-3.481,-30.590)
N7: (3.859,-4.397,-28.967)
N9: (5.335,-5.301,-30.387)
O5': (2.792,-8.254,-30.658)
O3': (6.388,-9.706,-30.101)
OP2: (0.703,-7.878,-29.304)
C3': (5.793,-8.442,-30.343)
C1': (5.965,-6.285,-31.289)
C5': (3.602,-8.964,-31.583)
O6: (4.402,-1.527,-27.954)
O4': (4.946,-6.983,-31.974)
C8: (4.165,-5.449,-29.679)
C2: (7.118,-2.256,-30.127)
C6: (5.099,-2.183,-28.738)
C5: (4.885,-3.498,-29.225)
C4: (5.801,-4.039,-30.101)
P: (1.254,-8.619,-30.464)
C4': (5.001,-8.397,-31.642)
C2': (6.799,-7.312,-30.526)
O2': (7.870,-7.724,-31.363)
N1: (6.264,-1.627,-29.254)
N2: (8.195,-1.555,-30.514)
N3: (6.928,-3.481,-30.590)
N7: (3.859,-4.397,-28.967)
N9: (5.335,-5.301,-30.387)
O5': (2.792,-8.254,-30.658)
O3': (6.388,-9.706,-30.101)
Image (generated by PyMOL):