Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1687:1686
Extra
PDB:
ATOM 1 O3' G A 686 80.665 -62.372 58.047 1.00 56.96 O
ATOM 2 P C A 687 79.217 -62.453 58.701 1.00 51.29 P
ATOM 3 OP1 C A 687 79.046 -63.827 59.261 1.00 51.73 O
ATOM 4 OP2 C A 687 78.254 -61.944 57.689 1.00 50.98 O
ATOM 5 O5' C A 687 79.331 -61.421 59.882 1.00 50.92 O
ATOM 6 C5' C A 687 80.231 -61.637 60.944 1.00 51.14 C
ATOM 7 C4' C A 687 80.780 -60.334 61.425 1.00 50.78 C
ATOM 8 O4' C A 687 81.709 -59.815 60.455 1.00 50.80 O
ATOM 9 C3' C A 687 79.774 -59.214 61.570 1.00 50.22 C
ATOM 10 O3' C A 687 79.002 -59.320 62.744 1.00 50.10 O
ATOM 11 C2' C A 687 80.658 -57.989 61.521 1.00 49.98 C
ATOM 12 O2' C A 687 81.357 -57.822 62.749 1.00 50.05 O
ATOM 13 C1' C A 687 81.654 -58.414 60.454 1.00 50.33 C
ATOM 14 N1 C A 687 81.238 -58.019 59.155 1.00 50.15 N
ATOM 15 C2 C A 687 81.255 -56.679 58.869 1.00 49.73 C
ATOM 16 O2 C A 687 81.603 -55.919 59.772 1.00 49.53 O
ATOM 17 N3 C A 687 80.887 -56.297 57.638 1.00 49.58 N
ATOM 18 C4 C A 687 80.531 -57.233 56.767 1.00 49.85 C
ATOM 19 N4 C A 687 80.146 -56.836 55.573 1.00 49.71 N
ATOM 20 C5 C A 687 80.523 -58.616 57.047 1.00 50.28 C
ATOM 21 C6 C A 687 80.886 -58.985 58.269 1.00 50.43 C
ATOM 22 P A A 688 77.421 -59.092 62.681 1.00 52.28 P
ATOM 23 OP1 A A 688 76.916 -59.297 64.080 1.00 52.26 O
ATOM 24 OP2 A A 688 76.878 -59.945 61.579 1.00 52.49 O
ATOM 25 O5' A A 688 77.316 -57.548 62.261 1.00 51.77 O
TER
ATOM 1 O3' U B 685 83.742 -68.327 56.102 1.00 64.69 O
ATOM 2 P G B 686 82.346 -67.838 56.722 1.00 59.36 P
ATOM 3 OP1 G B 686 82.126 -68.599 57.983 1.00 59.57 O
ATOM 4 OP2 G B 686 81.326 -67.938 55.634 1.00 59.26 O
ATOM 5 O5' G B 686 82.663 -66.321 57.076 1.00 58.83 O
ATOM 6 C5' G B 686 81.650 -65.399 57.443 1.00 58.27 C
ATOM 7 C4' G B 686 82.040 -64.037 56.980 1.00 57.86 C
ATOM 8 O4' G B 686 82.591 -64.151 55.658 1.00 58.07 O
ATOM 9 C3' G B 686 80.937 -63.009 56.839 1.00 57.29 C
ATOM 10 O3' G B 686 80.665 -62.372 58.047 1.00 56.96 O
ATOM 11 C2' G B 686 81.524 -62.057 55.834 1.00 57.11 C
ATOM 12 O2' G B 686 82.457 -61.203 56.479 1.00 56.96 O
ATOM 13 C1' G B 686 82.306 -63.004 54.937 1.00 57.64 C
ATOM 14 N9 G B 686 81.587 -63.406 53.752 1.00 57.72 N
ATOM 15 C8 G B 686 81.250 -64.685 53.409 1.00 58.15 C
ATOM 16 N7 G B 686 80.679 -64.729 52.235 1.00 58.14 N
ATOM 17 C5 G B 686 80.689 -63.405 51.813 1.00 57.69 C
ATOM 18 C6 G B 686 80.249 -62.816 50.634 1.00 57.49 C
ATOM 19 O6 G B 686 79.737 -63.380 49.693 1.00 57.69 O
ATOM 20 N1 G B 686 80.446 -61.444 50.594 1.00 57.04 N
ATOM 21 C2 G B 686 81.033 -60.707 51.600 1.00 56.81 C
ATOM 22 N2 G B 686 81.144 -59.382 51.405 1.00 56.40 N
ATOM 23 N3 G B 686 81.469 -61.240 52.725 1.00 57.00 N
ATOM 24 C4 G B 686 81.267 -62.575 52.738 1.00 57.43 C
ATOM 25 P C B 687 79.217 -62.453 58.701 1.00 51.29 P
ATOM 26 OP1 C B 687 79.046 -63.827 59.261 1.00 51.73 O
ATOM 27 OP2 C B 687 78.254 -61.944 57.689 1.00 50.98 O
ATOM 28 O5' C B 687 79.331 -61.421 59.882 1.00 50.92 O
TER
ATOM 2 P C A 687 79.217 -62.453 58.701 1.00 51.29 P
ATOM 3 OP1 C A 687 79.046 -63.827 59.261 1.00 51.73 O
ATOM 4 OP2 C A 687 78.254 -61.944 57.689 1.00 50.98 O
ATOM 5 O5' C A 687 79.331 -61.421 59.882 1.00 50.92 O
ATOM 6 C5' C A 687 80.231 -61.637 60.944 1.00 51.14 C
ATOM 7 C4' C A 687 80.780 -60.334 61.425 1.00 50.78 C
ATOM 8 O4' C A 687 81.709 -59.815 60.455 1.00 50.80 O
ATOM 9 C3' C A 687 79.774 -59.214 61.570 1.00 50.22 C
ATOM 10 O3' C A 687 79.002 -59.320 62.744 1.00 50.10 O
ATOM 11 C2' C A 687 80.658 -57.989 61.521 1.00 49.98 C
ATOM 12 O2' C A 687 81.357 -57.822 62.749 1.00 50.05 O
ATOM 13 C1' C A 687 81.654 -58.414 60.454 1.00 50.33 C
ATOM 14 N1 C A 687 81.238 -58.019 59.155 1.00 50.15 N
ATOM 15 C2 C A 687 81.255 -56.679 58.869 1.00 49.73 C
ATOM 16 O2 C A 687 81.603 -55.919 59.772 1.00 49.53 O
ATOM 17 N3 C A 687 80.887 -56.297 57.638 1.00 49.58 N
ATOM 18 C4 C A 687 80.531 -57.233 56.767 1.00 49.85 C
ATOM 19 N4 C A 687 80.146 -56.836 55.573 1.00 49.71 N
ATOM 20 C5 C A 687 80.523 -58.616 57.047 1.00 50.28 C
ATOM 21 C6 C A 687 80.886 -58.985 58.269 1.00 50.43 C
ATOM 22 P A A 688 77.421 -59.092 62.681 1.00 52.28 P
ATOM 23 OP1 A A 688 76.916 -59.297 64.080 1.00 52.26 O
ATOM 24 OP2 A A 688 76.878 -59.945 61.579 1.00 52.49 O
ATOM 25 O5' A A 688 77.316 -57.548 62.261 1.00 51.77 O
TER
ATOM 1 O3' U B 685 83.742 -68.327 56.102 1.00 64.69 O
ATOM 2 P G B 686 82.346 -67.838 56.722 1.00 59.36 P
ATOM 3 OP1 G B 686 82.126 -68.599 57.983 1.00 59.57 O
ATOM 4 OP2 G B 686 81.326 -67.938 55.634 1.00 59.26 O
ATOM 5 O5' G B 686 82.663 -66.321 57.076 1.00 58.83 O
ATOM 6 C5' G B 686 81.650 -65.399 57.443 1.00 58.27 C
ATOM 7 C4' G B 686 82.040 -64.037 56.980 1.00 57.86 C
ATOM 8 O4' G B 686 82.591 -64.151 55.658 1.00 58.07 O
ATOM 9 C3' G B 686 80.937 -63.009 56.839 1.00 57.29 C
ATOM 10 O3' G B 686 80.665 -62.372 58.047 1.00 56.96 O
ATOM 11 C2' G B 686 81.524 -62.057 55.834 1.00 57.11 C
ATOM 12 O2' G B 686 82.457 -61.203 56.479 1.00 56.96 O
ATOM 13 C1' G B 686 82.306 -63.004 54.937 1.00 57.64 C
ATOM 14 N9 G B 686 81.587 -63.406 53.752 1.00 57.72 N
ATOM 15 C8 G B 686 81.250 -64.685 53.409 1.00 58.15 C
ATOM 16 N7 G B 686 80.679 -64.729 52.235 1.00 58.14 N
ATOM 17 C5 G B 686 80.689 -63.405 51.813 1.00 57.69 C
ATOM 18 C6 G B 686 80.249 -62.816 50.634 1.00 57.49 C
ATOM 19 O6 G B 686 79.737 -63.380 49.693 1.00 57.69 O
ATOM 20 N1 G B 686 80.446 -61.444 50.594 1.00 57.04 N
ATOM 21 C2 G B 686 81.033 -60.707 51.600 1.00 56.81 C
ATOM 22 N2 G B 686 81.144 -59.382 51.405 1.00 56.40 N
ATOM 23 N3 G B 686 81.469 -61.240 52.725 1.00 57.00 N
ATOM 24 C4 G B 686 81.267 -62.575 52.738 1.00 57.43 C
ATOM 25 P C B 687 79.217 -62.453 58.701 1.00 51.29 P
ATOM 26 OP1 C B 687 79.046 -63.827 59.261 1.00 51.73 O
ATOM 27 OP2 C B 687 78.254 -61.944 57.689 1.00 50.98 O
ATOM 28 O5' C B 687 79.331 -61.421 59.882 1.00 50.92 O
TER
Atoms:
C2: (81.255,-56.679,58.869)
OP1: (79.046,-63.827,59.261)
OP2: (78.254,-61.944,57.689)
C4: (80.531,-57.233,56.767)
O5': (79.331,-61.421,59.882)
C3': (79.774,-59.214,61.570)
C1': (81.654,-58.414,60.454)
O4': (81.709,-59.815,60.455)
C5': (80.231,-61.637,60.944)
P: (79.217,-62.453,58.701)
O2: (81.603,-55.919,59.772)
C4': (80.780,-60.334,61.425)
C2': (80.658,-57.989,61.521)
O2': (81.357,-57.822,62.749)
N1: (81.238,-58.019,59.155)
N3: (80.887,-56.297,57.638)
N4: (80.146,-56.836,55.573)
C6: (80.886,-58.985,58.269)
C5: (80.523,-58.616,57.047)
O3': (79.002,-59.320,62.744)
OP1: (79.046,-63.827,59.261)
OP2: (78.254,-61.944,57.689)
C4: (80.531,-57.233,56.767)
O5': (79.331,-61.421,59.882)
C3': (79.774,-59.214,61.570)
C1': (81.654,-58.414,60.454)
O4': (81.709,-59.815,60.455)
C5': (80.231,-61.637,60.944)
P: (79.217,-62.453,58.701)
O2: (81.603,-55.919,59.772)
C4': (80.780,-60.334,61.425)
C2': (80.658,-57.989,61.521)
O2': (81.357,-57.822,62.749)
N1: (81.238,-58.019,59.155)
N3: (80.887,-56.297,57.638)
N4: (80.146,-56.836,55.573)
C6: (80.886,-58.985,58.269)
C5: (80.523,-58.616,57.047)
O3': (79.002,-59.320,62.744)
OP1: (82.126,-68.599,57.983)
OP2: (81.326,-67.938,55.634)
C3': (80.937,-63.009,56.839)
C1': (82.306,-63.004,54.937)
C5': (81.650,-65.399,57.443)
O6: (79.737,-63.380,49.693)
O4': (82.591,-64.151,55.658)
C8: (81.250,-64.685,53.409)
C2: (81.033,-60.707,51.600)
C6: (80.249,-62.816,50.634)
C5: (80.689,-63.405,51.813)
C4: (81.267,-62.575,52.738)
P: (82.346,-67.838,56.722)
C4': (82.040,-64.037,56.980)
C2': (81.524,-62.057,55.834)
O2': (82.457,-61.203,56.479)
N1: (80.446,-61.444,50.594)
N2: (81.144,-59.382,51.405)
N3: (81.469,-61.240,52.725)
N7: (80.679,-64.729,52.235)
N9: (81.587,-63.406,53.752)
O5': (82.663,-66.321,57.076)
O3': (80.665,-62.372,58.047)
OP2: (81.326,-67.938,55.634)
C3': (80.937,-63.009,56.839)
C1': (82.306,-63.004,54.937)
C5': (81.650,-65.399,57.443)
O6: (79.737,-63.380,49.693)
O4': (82.591,-64.151,55.658)
C8: (81.250,-64.685,53.409)
C2: (81.033,-60.707,51.600)
C6: (80.249,-62.816,50.634)
C5: (80.689,-63.405,51.813)
C4: (81.267,-62.575,52.738)
P: (82.346,-67.838,56.722)
C4': (82.040,-64.037,56.980)
C2': (81.524,-62.057,55.834)
O2': (82.457,-61.203,56.479)
N1: (80.446,-61.444,50.594)
N2: (81.144,-59.382,51.405)
N3: (81.469,-61.240,52.725)
N7: (80.679,-64.729,52.235)
N9: (81.587,-63.406,53.752)
O5': (82.663,-66.321,57.076)
O3': (80.665,-62.372,58.047)
Image (generated by PyMOL):