Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1IK5:A7:A4
Extra
PDB:
ATOM 1 O3' U A 6 0.871 -10.917 14.854 1.00 47.50 O
ATOM 2 P C A 7 -0.231 -9.857 14.371 1.00 45.77 P
ATOM 3 OP1 C A 7 0.231 -8.456 14.627 1.00 44.02 O
ATOM 4 OP2 C A 7 -1.530 -10.316 14.944 1.00 42.54 O
ATOM 5 O5' C A 7 -0.322 -10.126 12.805 1.00 43.68 O
ATOM 6 C5' C A 7 -0.862 -11.339 12.309 1.00 43.70 C
ATOM 7 C4' C A 7 -1.220 -11.194 10.855 1.00 43.73 C
ATOM 8 O4' C A 7 -2.414 -10.367 10.748 1.00 44.20 O
ATOM 9 C3' C A 7 -0.221 -10.472 9.967 1.00 44.24 C
ATOM 10 O3' C A 7 0.911 -11.252 9.573 1.00 47.62 O
ATOM 11 C2' C A 7 -1.111 -10.067 8.802 1.00 44.38 C
ATOM 12 O2' C A 7 -1.457 -11.153 7.951 1.00 43.10 O
ATOM 13 C1' C A 7 -2.345 -9.586 9.563 1.00 41.26 C
ATOM 14 N1 C A 7 -2.204 -8.156 9.929 1.00 39.86 N
ATOM 15 C2 C A 7 -2.447 -7.205 8.934 1.00 37.20 C
ATOM 16 O2 C A 7 -2.808 -7.608 7.804 1.00 33.72 O
ATOM 17 N3 C A 7 -2.295 -5.884 9.221 1.00 33.77 N
ATOM 18 C4 C A 7 -1.936 -5.503 10.448 1.00 34.95 C
ATOM 19 N4 C A 7 -1.825 -4.203 10.682 1.00 30.69 N
ATOM 20 C5 C A 7 -1.678 -6.456 11.495 1.00 35.72 C
ATOM 21 C6 C A 7 -1.831 -7.760 11.191 1.00 38.49 C
ATOM 22 P G A 8 2.329 -10.518 9.340 1.00 48.72 P
ATOM 23 OP1 G A 8 3.398 -11.545 9.295 1.00 53.69 O
ATOM 24 OP2 G A 8 2.450 -9.374 10.288 1.00 51.61 O
ATOM 25 O5' G A 8 2.207 -9.805 7.919 1.00 47.13 O
TER
ATOM 1 O3' A B 3 -2.270 -1.890 20.633 1.00 33.37 O
ATOM 2 P U B 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 3 OP1 U B 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 4 OP2 U B 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 5 O5' U B 4 -1.122 -3.350 18.903 1.00 33.42 O
ATOM 6 C5' U B 4 -1.650 -4.656 19.203 1.00 32.99 C
ATOM 7 C4' U B 4 -1.955 -5.427 17.930 1.00 33.82 C
ATOM 8 O4' U B 4 -3.076 -4.814 17.241 1.00 34.80 O
ATOM 9 C3' U B 4 -0.844 -5.501 16.890 1.00 35.75 C
ATOM 10 O3' U B 4 0.008 -6.625 17.149 1.00 39.38 O
ATOM 11 C2' U B 4 -1.620 -5.735 15.594 1.00 35.12 C
ATOM 12 O2' U B 4 -1.971 -7.088 15.405 1.00 37.05 O
ATOM 13 C1' U B 4 -2.906 -4.945 15.845 1.00 32.08 C
ATOM 14 N1 U B 4 -2.893 -3.616 15.216 1.00 31.66 N
ATOM 15 C2 U B 4 -3.492 -3.515 13.967 1.00 31.61 C
ATOM 16 O2 U B 4 -4.005 -4.459 13.408 1.00 28.50 O
ATOM 17 N3 U B 4 -3.458 -2.266 13.390 1.00 29.14 N
ATOM 18 C4 U B 4 -2.890 -1.122 13.894 1.00 31.92 C
ATOM 19 O4 U B 4 -2.891 -0.100 13.193 1.00 28.03 O
ATOM 20 C5 U B 4 -2.280 -1.282 15.197 1.00 30.88 C
ATOM 21 C6 U B 4 -2.310 -2.502 15.804 1.00 31.91 C
ATOM 22 P U B 5 1.583 -6.407 17.423 1.00 44.49 P
ATOM 23 OP1 U B 5 2.305 -7.704 17.383 1.00 43.99 O
ATOM 24 OP2 U B 5 1.676 -5.574 18.641 1.00 39.98 O
ATOM 25 O5' U B 5 2.111 -5.523 16.193 1.00 43.36 O
TER
ATOM 2 P C A 7 -0.231 -9.857 14.371 1.00 45.77 P
ATOM 3 OP1 C A 7 0.231 -8.456 14.627 1.00 44.02 O
ATOM 4 OP2 C A 7 -1.530 -10.316 14.944 1.00 42.54 O
ATOM 5 O5' C A 7 -0.322 -10.126 12.805 1.00 43.68 O
ATOM 6 C5' C A 7 -0.862 -11.339 12.309 1.00 43.70 C
ATOM 7 C4' C A 7 -1.220 -11.194 10.855 1.00 43.73 C
ATOM 8 O4' C A 7 -2.414 -10.367 10.748 1.00 44.20 O
ATOM 9 C3' C A 7 -0.221 -10.472 9.967 1.00 44.24 C
ATOM 10 O3' C A 7 0.911 -11.252 9.573 1.00 47.62 O
ATOM 11 C2' C A 7 -1.111 -10.067 8.802 1.00 44.38 C
ATOM 12 O2' C A 7 -1.457 -11.153 7.951 1.00 43.10 O
ATOM 13 C1' C A 7 -2.345 -9.586 9.563 1.00 41.26 C
ATOM 14 N1 C A 7 -2.204 -8.156 9.929 1.00 39.86 N
ATOM 15 C2 C A 7 -2.447 -7.205 8.934 1.00 37.20 C
ATOM 16 O2 C A 7 -2.808 -7.608 7.804 1.00 33.72 O
ATOM 17 N3 C A 7 -2.295 -5.884 9.221 1.00 33.77 N
ATOM 18 C4 C A 7 -1.936 -5.503 10.448 1.00 34.95 C
ATOM 19 N4 C A 7 -1.825 -4.203 10.682 1.00 30.69 N
ATOM 20 C5 C A 7 -1.678 -6.456 11.495 1.00 35.72 C
ATOM 21 C6 C A 7 -1.831 -7.760 11.191 1.00 38.49 C
ATOM 22 P G A 8 2.329 -10.518 9.340 1.00 48.72 P
ATOM 23 OP1 G A 8 3.398 -11.545 9.295 1.00 53.69 O
ATOM 24 OP2 G A 8 2.450 -9.374 10.288 1.00 51.61 O
ATOM 25 O5' G A 8 2.207 -9.805 7.919 1.00 47.13 O
TER
ATOM 1 O3' A B 3 -2.270 -1.890 20.633 1.00 33.37 O
ATOM 2 P U B 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 3 OP1 U B 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 4 OP2 U B 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 5 O5' U B 4 -1.122 -3.350 18.903 1.00 33.42 O
ATOM 6 C5' U B 4 -1.650 -4.656 19.203 1.00 32.99 C
ATOM 7 C4' U B 4 -1.955 -5.427 17.930 1.00 33.82 C
ATOM 8 O4' U B 4 -3.076 -4.814 17.241 1.00 34.80 O
ATOM 9 C3' U B 4 -0.844 -5.501 16.890 1.00 35.75 C
ATOM 10 O3' U B 4 0.008 -6.625 17.149 1.00 39.38 O
ATOM 11 C2' U B 4 -1.620 -5.735 15.594 1.00 35.12 C
ATOM 12 O2' U B 4 -1.971 -7.088 15.405 1.00 37.05 O
ATOM 13 C1' U B 4 -2.906 -4.945 15.845 1.00 32.08 C
ATOM 14 N1 U B 4 -2.893 -3.616 15.216 1.00 31.66 N
ATOM 15 C2 U B 4 -3.492 -3.515 13.967 1.00 31.61 C
ATOM 16 O2 U B 4 -4.005 -4.459 13.408 1.00 28.50 O
ATOM 17 N3 U B 4 -3.458 -2.266 13.390 1.00 29.14 N
ATOM 18 C4 U B 4 -2.890 -1.122 13.894 1.00 31.92 C
ATOM 19 O4 U B 4 -2.891 -0.100 13.193 1.00 28.03 O
ATOM 20 C5 U B 4 -2.280 -1.282 15.197 1.00 30.88 C
ATOM 21 C6 U B 4 -2.310 -2.502 15.804 1.00 31.91 C
ATOM 22 P U B 5 1.583 -6.407 17.423 1.00 44.49 P
ATOM 23 OP1 U B 5 2.305 -7.704 17.383 1.00 43.99 O
ATOM 24 OP2 U B 5 1.676 -5.574 18.641 1.00 39.98 O
ATOM 25 O5' U B 5 2.111 -5.523 16.193 1.00 43.36 O
TER
Atoms:
C2: (-2.447,-7.205,8.934)
OP1: (0.231,-8.456,14.627)
OP2: (-1.530,-10.316,14.944)
C4: (-1.936,-5.503,10.448)
O5': (-0.322,-10.126,12.805)
C3': (-0.221,-10.472,9.967)
C1': (-2.345,-9.586,9.563)
O4': (-2.414,-10.367,10.748)
C5': (-0.862,-11.339,12.309)
P: (-0.231,-9.857,14.371)
O2: (-2.808,-7.608,7.804)
C4': (-1.220,-11.194,10.855)
C2': (-1.111,-10.067,8.802)
O2': (-1.457,-11.153,7.951)
N1: (-2.204,-8.156,9.929)
N3: (-2.295,-5.884,9.221)
N4: (-1.825,-4.203,10.682)
C6: (-1.831,-7.760,11.191)
C5: (-1.678,-6.456,11.495)
O3': (0.911,-11.252,9.573)
OP1: (0.231,-8.456,14.627)
OP2: (-1.530,-10.316,14.944)
C4: (-1.936,-5.503,10.448)
O5': (-0.322,-10.126,12.805)
C3': (-0.221,-10.472,9.967)
C1': (-2.345,-9.586,9.563)
O4': (-2.414,-10.367,10.748)
C5': (-0.862,-11.339,12.309)
P: (-0.231,-9.857,14.371)
O2: (-2.808,-7.608,7.804)
C4': (-1.220,-11.194,10.855)
C2': (-1.111,-10.067,8.802)
O2': (-1.457,-11.153,7.951)
N1: (-2.204,-8.156,9.929)
N3: (-2.295,-5.884,9.221)
N4: (-1.825,-4.203,10.682)
C6: (-1.831,-7.760,11.191)
C5: (-1.678,-6.456,11.495)
O3': (0.911,-11.252,9.573)
C4: (-2.890,-1.122,13.894)
N3: (-3.458,-2.266,13.390)
OP1: (-0.151,-3.057,21.192)
OP2: (-0.147,-1.128,19.486)
C2: (-3.492,-3.515,13.967)
C1': (-2.906,-4.945,15.845)
C3': (-0.844,-5.501,16.890)
O5': (-1.122,-3.350,18.903)
O4': (-3.076,-4.814,17.241)
C5': (-1.650,-4.656,19.203)
P: (-0.827,-2.297,20.076)
C4': (-1.955,-5.427,17.930)
C2': (-1.620,-5.735,15.594)
O2': (-1.971,-7.088,15.405)
N1: (-2.893,-3.616,15.216)
O4: (-2.891,-0.100,13.193)
O2: (-4.005,-4.459,13.408)
C6: (-2.310,-2.502,15.804)
C5: (-2.280,-1.282,15.197)
O3': (0.008,-6.625,17.149)
N3: (-3.458,-2.266,13.390)
OP1: (-0.151,-3.057,21.192)
OP2: (-0.147,-1.128,19.486)
C2: (-3.492,-3.515,13.967)
C1': (-2.906,-4.945,15.845)
C3': (-0.844,-5.501,16.890)
O5': (-1.122,-3.350,18.903)
O4': (-3.076,-4.814,17.241)
C5': (-1.650,-4.656,19.203)
P: (-0.827,-2.297,20.076)
C4': (-1.955,-5.427,17.930)
C2': (-1.620,-5.735,15.594)
O2': (-1.971,-7.088,15.405)
N1: (-2.893,-3.616,15.216)
O4: (-2.891,-0.100,13.193)
O2: (-4.005,-4.459,13.408)
C6: (-2.310,-2.502,15.804)
C5: (-2.280,-1.282,15.197)
O3': (0.008,-6.625,17.149)
Image (generated by PyMOL):