Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A115:A116
Extra
PDB:
ATOM 1 O3' A A 114 -19.111 60.176 112.805 1.00 23.13 O
ATOM 2 P G A 115 -18.068 61.240 112.219 1.00 10.47 P
ATOM 3 OP1 G A 115 -18.786 62.540 112.095 1.00 10.47 O
ATOM 4 OP2 G A 115 -17.460 60.643 111.011 1.00 10.47 O
ATOM 5 O5' G A 115 -16.990 61.314 113.367 1.00 10.47 O
ATOM 6 C5' G A 115 -15.842 62.104 113.213 1.00 10.47 C
ATOM 7 C4' G A 115 -14.682 61.464 113.891 1.00 10.47 C
ATOM 8 O4' G A 115 -14.845 60.020 113.864 1.00 10.47 O
ATOM 9 C3' G A 115 -13.337 61.709 113.243 1.00 10.47 C
ATOM 10 O3' G A 115 -12.773 62.949 113.618 1.00 10.47 O
ATOM 11 C2' G A 115 -12.538 60.512 113.710 1.00 10.47 C
ATOM 12 O2' G A 115 -12.155 60.676 115.063 1.00 10.47 O
ATOM 13 C1' G A 115 -13.592 59.406 113.640 1.00 10.47 C
ATOM 14 N9 G A 115 -13.623 58.724 112.311 1.00 10.99 N
ATOM 15 C8 G A 115 -14.762 58.606 111.541 1.00 10.99 C
ATOM 16 N7 G A 115 -14.597 57.973 110.405 1.00 10.99 N
ATOM 17 C5 G A 115 -13.260 57.640 110.413 1.00 10.99 C
ATOM 18 C6 G A 115 -12.530 56.937 109.427 1.00 10.99 C
ATOM 19 O6 G A 115 -12.948 56.492 108.364 1.00 10.99 O
ATOM 20 N1 G A 115 -11.199 56.756 109.752 1.00 10.99 N
ATOM 21 C2 G A 115 -10.666 57.216 110.913 1.00 10.99 C
ATOM 22 N2 G A 115 -9.368 56.936 111.029 1.00 10.99 N
ATOM 23 N3 G A 115 -11.331 57.883 111.857 1.00 10.99 N
ATOM 24 C4 G A 115 -12.633 58.074 111.562 1.00 10.99 C
ATOM 25 P U A 116 -12.846 64.224 112.627 1.00 17.06 P
ATOM 26 OP1 U A 116 -12.575 65.427 113.451 1.00 17.06 O
ATOM 27 OP2 U A 116 -14.133 64.138 111.879 1.00 17.06 O
ATOM 28 O5' U A 116 -11.629 63.969 111.641 1.00 17.06 O
TER
ATOM 1 O3' G B 115 -12.773 62.949 113.618 1.00 10.47 O
ATOM 2 P U B 116 -12.846 64.224 112.627 1.00 17.06 P
ATOM 3 OP1 U B 116 -12.575 65.427 113.451 1.00 17.06 O
ATOM 4 OP2 U B 116 -14.133 64.138 111.879 1.00 17.06 O
ATOM 5 O5' U B 116 -11.629 63.969 111.641 1.00 17.06 O
ATOM 6 C5' U B 116 -10.361 63.587 112.152 1.00 17.06 C
ATOM 7 C4' U B 116 -9.729 62.497 111.327 1.00 17.06 C
ATOM 8 O4' U B 116 -10.660 61.405 111.135 1.00 17.06 O
ATOM 9 C3' U B 116 -9.319 62.877 109.919 1.00 17.06 C
ATOM 10 O3' U B 116 -8.086 63.564 109.891 1.00 17.06 O
ATOM 11 C2' U B 116 -9.245 61.532 109.231 1.00 17.06 C
ATOM 12 O2' U B 116 -7.998 60.911 109.511 1.00 17.06 O
ATOM 13 C1' U B 116 -10.356 60.743 109.933 1.00 17.06 C
ATOM 14 N1 U B 116 -11.579 60.633 109.116 1.00 16.95 N
ATOM 15 C2 U B 116 -11.516 59.960 107.922 1.00 16.95 C
ATOM 16 O2 U B 116 -10.487 59.483 107.510 1.00 16.95 O
ATOM 17 N3 U B 116 -12.678 59.876 107.198 1.00 16.95 N
ATOM 18 C4 U B 116 -13.916 60.379 107.539 1.00 16.95 C
ATOM 19 O4 U B 116 -14.891 60.225 106.788 1.00 16.95 O
ATOM 20 C5 U B 116 -13.912 61.049 108.799 1.00 16.95 C
ATOM 21 C6 U B 116 -12.777 61.135 109.523 1.00 16.95 C
ATOM 22 P A B 117 -8.014 65.126 109.526 1.00 29.73 P
ATOM 23 OP1 A B 117 -7.041 65.735 110.466 1.00 29.73 O
ATOM 24 OP2 A B 117 -9.414 65.644 109.487 1.00 29.73 O
ATOM 25 O5' A B 117 -7.412 65.123 108.067 1.00 29.73 O
TER
ATOM 2 P G A 115 -18.068 61.240 112.219 1.00 10.47 P
ATOM 3 OP1 G A 115 -18.786 62.540 112.095 1.00 10.47 O
ATOM 4 OP2 G A 115 -17.460 60.643 111.011 1.00 10.47 O
ATOM 5 O5' G A 115 -16.990 61.314 113.367 1.00 10.47 O
ATOM 6 C5' G A 115 -15.842 62.104 113.213 1.00 10.47 C
ATOM 7 C4' G A 115 -14.682 61.464 113.891 1.00 10.47 C
ATOM 8 O4' G A 115 -14.845 60.020 113.864 1.00 10.47 O
ATOM 9 C3' G A 115 -13.337 61.709 113.243 1.00 10.47 C
ATOM 10 O3' G A 115 -12.773 62.949 113.618 1.00 10.47 O
ATOM 11 C2' G A 115 -12.538 60.512 113.710 1.00 10.47 C
ATOM 12 O2' G A 115 -12.155 60.676 115.063 1.00 10.47 O
ATOM 13 C1' G A 115 -13.592 59.406 113.640 1.00 10.47 C
ATOM 14 N9 G A 115 -13.623 58.724 112.311 1.00 10.99 N
ATOM 15 C8 G A 115 -14.762 58.606 111.541 1.00 10.99 C
ATOM 16 N7 G A 115 -14.597 57.973 110.405 1.00 10.99 N
ATOM 17 C5 G A 115 -13.260 57.640 110.413 1.00 10.99 C
ATOM 18 C6 G A 115 -12.530 56.937 109.427 1.00 10.99 C
ATOM 19 O6 G A 115 -12.948 56.492 108.364 1.00 10.99 O
ATOM 20 N1 G A 115 -11.199 56.756 109.752 1.00 10.99 N
ATOM 21 C2 G A 115 -10.666 57.216 110.913 1.00 10.99 C
ATOM 22 N2 G A 115 -9.368 56.936 111.029 1.00 10.99 N
ATOM 23 N3 G A 115 -11.331 57.883 111.857 1.00 10.99 N
ATOM 24 C4 G A 115 -12.633 58.074 111.562 1.00 10.99 C
ATOM 25 P U A 116 -12.846 64.224 112.627 1.00 17.06 P
ATOM 26 OP1 U A 116 -12.575 65.427 113.451 1.00 17.06 O
ATOM 27 OP2 U A 116 -14.133 64.138 111.879 1.00 17.06 O
ATOM 28 O5' U A 116 -11.629 63.969 111.641 1.00 17.06 O
TER
ATOM 1 O3' G B 115 -12.773 62.949 113.618 1.00 10.47 O
ATOM 2 P U B 116 -12.846 64.224 112.627 1.00 17.06 P
ATOM 3 OP1 U B 116 -12.575 65.427 113.451 1.00 17.06 O
ATOM 4 OP2 U B 116 -14.133 64.138 111.879 1.00 17.06 O
ATOM 5 O5' U B 116 -11.629 63.969 111.641 1.00 17.06 O
ATOM 6 C5' U B 116 -10.361 63.587 112.152 1.00 17.06 C
ATOM 7 C4' U B 116 -9.729 62.497 111.327 1.00 17.06 C
ATOM 8 O4' U B 116 -10.660 61.405 111.135 1.00 17.06 O
ATOM 9 C3' U B 116 -9.319 62.877 109.919 1.00 17.06 C
ATOM 10 O3' U B 116 -8.086 63.564 109.891 1.00 17.06 O
ATOM 11 C2' U B 116 -9.245 61.532 109.231 1.00 17.06 C
ATOM 12 O2' U B 116 -7.998 60.911 109.511 1.00 17.06 O
ATOM 13 C1' U B 116 -10.356 60.743 109.933 1.00 17.06 C
ATOM 14 N1 U B 116 -11.579 60.633 109.116 1.00 16.95 N
ATOM 15 C2 U B 116 -11.516 59.960 107.922 1.00 16.95 C
ATOM 16 O2 U B 116 -10.487 59.483 107.510 1.00 16.95 O
ATOM 17 N3 U B 116 -12.678 59.876 107.198 1.00 16.95 N
ATOM 18 C4 U B 116 -13.916 60.379 107.539 1.00 16.95 C
ATOM 19 O4 U B 116 -14.891 60.225 106.788 1.00 16.95 O
ATOM 20 C5 U B 116 -13.912 61.049 108.799 1.00 16.95 C
ATOM 21 C6 U B 116 -12.777 61.135 109.523 1.00 16.95 C
ATOM 22 P A B 117 -8.014 65.126 109.526 1.00 29.73 P
ATOM 23 OP1 A B 117 -7.041 65.735 110.466 1.00 29.73 O
ATOM 24 OP2 A B 117 -9.414 65.644 109.487 1.00 29.73 O
ATOM 25 O5' A B 117 -7.412 65.123 108.067 1.00 29.73 O
TER
Atoms:
OP1: (-18.786,62.540,112.095)
OP2: (-17.460,60.643,111.011)
C3': (-13.337,61.709,113.243)
C1': (-13.592,59.406,113.640)
C5': (-15.842,62.104,113.213)
O6: (-12.948,56.492,108.364)
O4': (-14.845,60.020,113.864)
C8: (-14.762,58.606,111.541)
C2: (-10.666,57.216,110.913)
C6: (-12.530,56.937,109.427)
C5: (-13.260,57.640,110.413)
C4: (-12.633,58.074,111.562)
P: (-18.068,61.240,112.219)
C4': (-14.682,61.464,113.891)
C2': (-12.538,60.512,113.710)
O2': (-12.155,60.676,115.063)
N1: (-11.199,56.756,109.752)
N2: (-9.368,56.936,111.029)
N3: (-11.331,57.883,111.857)
N7: (-14.597,57.973,110.405)
N9: (-13.623,58.724,112.311)
O5': (-16.990,61.314,113.367)
O3': (-12.773,62.949,113.618)
OP2: (-17.460,60.643,111.011)
C3': (-13.337,61.709,113.243)
C1': (-13.592,59.406,113.640)
C5': (-15.842,62.104,113.213)
O6: (-12.948,56.492,108.364)
O4': (-14.845,60.020,113.864)
C8: (-14.762,58.606,111.541)
C2: (-10.666,57.216,110.913)
C6: (-12.530,56.937,109.427)
C5: (-13.260,57.640,110.413)
C4: (-12.633,58.074,111.562)
P: (-18.068,61.240,112.219)
C4': (-14.682,61.464,113.891)
C2': (-12.538,60.512,113.710)
O2': (-12.155,60.676,115.063)
N1: (-11.199,56.756,109.752)
N2: (-9.368,56.936,111.029)
N3: (-11.331,57.883,111.857)
N7: (-14.597,57.973,110.405)
N9: (-13.623,58.724,112.311)
O5': (-16.990,61.314,113.367)
O3': (-12.773,62.949,113.618)
C4: (-13.916,60.379,107.539)
N3: (-12.678,59.876,107.198)
OP1: (-12.575,65.427,113.451)
OP2: (-14.133,64.138,111.879)
C2: (-11.516,59.960,107.922)
C1': (-10.356,60.743,109.933)
C3': (-9.319,62.877,109.919)
O5': (-11.629,63.969,111.641)
O4': (-10.660,61.405,111.135)
C5': (-10.361,63.587,112.152)
P: (-12.846,64.224,112.627)
C4': (-9.729,62.497,111.327)
C2': (-9.245,61.532,109.231)
O2': (-7.998,60.911,109.511)
N1: (-11.579,60.633,109.116)
O4: (-14.891,60.225,106.788)
O2: (-10.487,59.483,107.510)
C6: (-12.777,61.135,109.523)
C5: (-13.912,61.049,108.799)
O3': (-8.086,63.564,109.891)
N3: (-12.678,59.876,107.198)
OP1: (-12.575,65.427,113.451)
OP2: (-14.133,64.138,111.879)
C2: (-11.516,59.960,107.922)
C1': (-10.356,60.743,109.933)
C3': (-9.319,62.877,109.919)
O5': (-11.629,63.969,111.641)
O4': (-10.660,61.405,111.135)
C5': (-10.361,63.587,112.152)
P: (-12.846,64.224,112.627)
C4': (-9.729,62.497,111.327)
C2': (-9.245,61.532,109.231)
O2': (-7.998,60.911,109.511)
N1: (-11.579,60.633,109.116)
O4: (-14.891,60.225,106.788)
O2: (-10.487,59.483,107.510)
C6: (-12.777,61.135,109.523)
C5: (-13.912,61.049,108.799)
O3': (-8.086,63.564,109.891)
Image (generated by PyMOL):