Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1379:A1377
Extra
PDB:
ATOM 1 O3' U A1378 63.370 170.525 65.944 1.00 44.24 O
ATOM 2 P C A1379 63.097 172.046 65.507 1.00 44.96 P
ATOM 3 OP1 C A1379 63.063 172.832 66.765 1.00 44.23 O
ATOM 4 OP2 C A1379 61.946 172.127 64.586 1.00 44.17 O
ATOM 5 O5' C A1379 64.415 172.444 64.699 1.00 44.85 O
ATOM 6 C5' C A1379 65.674 172.644 65.393 1.00 45.73 C
ATOM 7 C4' C A1379 66.478 173.734 64.726 1.00 45.82 C
ATOM 8 O4' C A1379 66.949 173.242 63.448 1.00 45.83 O
ATOM 9 C3' C A1379 65.703 175.013 64.438 1.00 45.33 C
ATOM 10 O3' C A1379 65.833 175.933 65.525 1.00 44.82 O
ATOM 11 C2' C A1379 66.349 175.507 63.152 1.00 46.01 C
ATOM 12 O2' C A1379 67.596 176.113 63.387 1.00 45.76 O
ATOM 13 C1' C A1379 66.655 174.184 62.441 1.00 47.02 C
ATOM 14 N1 C A1379 65.608 173.622 61.555 1.00 48.07 N
ATOM 15 C2 C A1379 65.155 174.390 60.464 1.00 48.50 C
ATOM 16 O2 C A1379 65.606 175.534 60.302 1.00 51.19 O
ATOM 17 N3 C A1379 64.244 173.863 59.617 1.00 47.19 N
ATOM 18 C4 C A1379 63.778 172.632 59.823 1.00 46.73 C
ATOM 19 N4 C A1379 62.900 172.155 58.963 1.00 46.09 N
ATOM 20 C5 C A1379 64.200 171.837 60.929 1.00 47.80 C
ATOM 21 C6 C A1379 65.103 172.367 61.767 1.00 47.52 C
ATOM 22 P C A1380 64.523 176.600 66.175 1.00 46.43 P
ATOM 23 OP1 C A1380 64.906 177.350 67.411 1.00 45.88 O
ATOM 24 OP2 C A1380 63.493 175.533 66.272 1.00 46.18 O
ATOM 25 O5' C A1380 64.069 177.650 65.060 1.00 46.94 O
TER
ATOM 1 O3' G B1376 65.362 163.515 59.005 1.00 38.06 O
ATOM 2 P U B1377 63.770 163.539 58.857 1.00 37.57 P
ATOM 3 OP1 U B1377 63.169 162.718 59.936 1.00 36.56 O
ATOM 4 OP2 U B1377 63.378 163.301 57.451 1.00 38.04 O
ATOM 5 O5' U B1377 63.461 165.055 59.185 1.00 35.59 O
ATOM 6 C5' U B1377 63.608 165.548 60.507 1.00 36.53 C
ATOM 7 C4' U B1377 63.653 167.044 60.487 1.00 37.83 C
ATOM 8 O4' U B1377 64.967 167.478 60.051 1.00 39.02 O
ATOM 9 C3' U B1377 62.662 167.693 59.532 1.00 36.76 C
ATOM 10 O3' U B1377 62.160 168.866 60.135 1.00 35.05 O
ATOM 11 C2' U B1377 63.509 167.987 58.296 1.00 37.28 C
ATOM 12 O2' U B1377 63.025 169.078 57.535 1.00 37.56 O
ATOM 13 C1' U B1377 64.840 168.337 58.940 1.00 37.03 C
ATOM 14 N1 U B1377 66.032 168.179 58.100 1.00 36.38 N
ATOM 15 C2 U B1377 66.653 169.330 57.702 1.00 37.13 C
ATOM 16 O2 U B1377 66.175 170.434 57.889 1.00 39.28 O
ATOM 17 N3 U B1377 67.845 169.148 57.053 1.00 37.02 N
ATOM 18 C4 U B1377 68.439 167.950 56.727 1.00 36.38 C
ATOM 19 O4 U B1377 69.569 167.958 56.252 1.00 35.48 O
ATOM 20 C5 U B1377 67.687 166.787 57.098 1.00 35.83 C
ATOM 21 C6 U B1377 66.540 166.938 57.760 1.00 36.47 C
ATOM 22 P U B1378 60.864 168.747 61.051 1.00 39.01 P
ATOM 23 OP1 U B1378 60.088 167.585 60.498 1.00 42.62 O
ATOM 24 OP2 U B1378 60.213 170.058 61.163 1.00 39.73 O
ATOM 25 O5' U B1378 61.434 168.376 62.487 1.00 38.42 O
TER
ATOM 2 P C A1379 63.097 172.046 65.507 1.00 44.96 P
ATOM 3 OP1 C A1379 63.063 172.832 66.765 1.00 44.23 O
ATOM 4 OP2 C A1379 61.946 172.127 64.586 1.00 44.17 O
ATOM 5 O5' C A1379 64.415 172.444 64.699 1.00 44.85 O
ATOM 6 C5' C A1379 65.674 172.644 65.393 1.00 45.73 C
ATOM 7 C4' C A1379 66.478 173.734 64.726 1.00 45.82 C
ATOM 8 O4' C A1379 66.949 173.242 63.448 1.00 45.83 O
ATOM 9 C3' C A1379 65.703 175.013 64.438 1.00 45.33 C
ATOM 10 O3' C A1379 65.833 175.933 65.525 1.00 44.82 O
ATOM 11 C2' C A1379 66.349 175.507 63.152 1.00 46.01 C
ATOM 12 O2' C A1379 67.596 176.113 63.387 1.00 45.76 O
ATOM 13 C1' C A1379 66.655 174.184 62.441 1.00 47.02 C
ATOM 14 N1 C A1379 65.608 173.622 61.555 1.00 48.07 N
ATOM 15 C2 C A1379 65.155 174.390 60.464 1.00 48.50 C
ATOM 16 O2 C A1379 65.606 175.534 60.302 1.00 51.19 O
ATOM 17 N3 C A1379 64.244 173.863 59.617 1.00 47.19 N
ATOM 18 C4 C A1379 63.778 172.632 59.823 1.00 46.73 C
ATOM 19 N4 C A1379 62.900 172.155 58.963 1.00 46.09 N
ATOM 20 C5 C A1379 64.200 171.837 60.929 1.00 47.80 C
ATOM 21 C6 C A1379 65.103 172.367 61.767 1.00 47.52 C
ATOM 22 P C A1380 64.523 176.600 66.175 1.00 46.43 P
ATOM 23 OP1 C A1380 64.906 177.350 67.411 1.00 45.88 O
ATOM 24 OP2 C A1380 63.493 175.533 66.272 1.00 46.18 O
ATOM 25 O5' C A1380 64.069 177.650 65.060 1.00 46.94 O
TER
ATOM 1 O3' G B1376 65.362 163.515 59.005 1.00 38.06 O
ATOM 2 P U B1377 63.770 163.539 58.857 1.00 37.57 P
ATOM 3 OP1 U B1377 63.169 162.718 59.936 1.00 36.56 O
ATOM 4 OP2 U B1377 63.378 163.301 57.451 1.00 38.04 O
ATOM 5 O5' U B1377 63.461 165.055 59.185 1.00 35.59 O
ATOM 6 C5' U B1377 63.608 165.548 60.507 1.00 36.53 C
ATOM 7 C4' U B1377 63.653 167.044 60.487 1.00 37.83 C
ATOM 8 O4' U B1377 64.967 167.478 60.051 1.00 39.02 O
ATOM 9 C3' U B1377 62.662 167.693 59.532 1.00 36.76 C
ATOM 10 O3' U B1377 62.160 168.866 60.135 1.00 35.05 O
ATOM 11 C2' U B1377 63.509 167.987 58.296 1.00 37.28 C
ATOM 12 O2' U B1377 63.025 169.078 57.535 1.00 37.56 O
ATOM 13 C1' U B1377 64.840 168.337 58.940 1.00 37.03 C
ATOM 14 N1 U B1377 66.032 168.179 58.100 1.00 36.38 N
ATOM 15 C2 U B1377 66.653 169.330 57.702 1.00 37.13 C
ATOM 16 O2 U B1377 66.175 170.434 57.889 1.00 39.28 O
ATOM 17 N3 U B1377 67.845 169.148 57.053 1.00 37.02 N
ATOM 18 C4 U B1377 68.439 167.950 56.727 1.00 36.38 C
ATOM 19 O4 U B1377 69.569 167.958 56.252 1.00 35.48 O
ATOM 20 C5 U B1377 67.687 166.787 57.098 1.00 35.83 C
ATOM 21 C6 U B1377 66.540 166.938 57.760 1.00 36.47 C
ATOM 22 P U B1378 60.864 168.747 61.051 1.00 39.01 P
ATOM 23 OP1 U B1378 60.088 167.585 60.498 1.00 42.62 O
ATOM 24 OP2 U B1378 60.213 170.058 61.163 1.00 39.73 O
ATOM 25 O5' U B1378 61.434 168.376 62.487 1.00 38.42 O
TER
Atoms:
C2: (65.155,174.390,60.464)
OP1: (63.063,172.832,66.765)
OP2: (61.946,172.127,64.586)
C4: (63.778,172.632,59.823)
O5': (64.415,172.444,64.699)
C3': (65.703,175.013,64.438)
C1': (66.655,174.184,62.441)
O4': (66.949,173.242,63.448)
C5': (65.674,172.644,65.393)
P: (63.097,172.046,65.507)
O2: (65.606,175.534,60.302)
C4': (66.478,173.734,64.726)
C2': (66.349,175.507,63.152)
O2': (67.596,176.113,63.387)
N1: (65.608,173.622,61.555)
N3: (64.244,173.863,59.617)
N4: (62.900,172.155,58.963)
C6: (65.103,172.367,61.767)
C5: (64.200,171.837,60.929)
O3': (65.833,175.933,65.525)
OP1: (63.063,172.832,66.765)
OP2: (61.946,172.127,64.586)
C4: (63.778,172.632,59.823)
O5': (64.415,172.444,64.699)
C3': (65.703,175.013,64.438)
C1': (66.655,174.184,62.441)
O4': (66.949,173.242,63.448)
C5': (65.674,172.644,65.393)
P: (63.097,172.046,65.507)
O2: (65.606,175.534,60.302)
C4': (66.478,173.734,64.726)
C2': (66.349,175.507,63.152)
O2': (67.596,176.113,63.387)
N1: (65.608,173.622,61.555)
N3: (64.244,173.863,59.617)
N4: (62.900,172.155,58.963)
C6: (65.103,172.367,61.767)
C5: (64.200,171.837,60.929)
O3': (65.833,175.933,65.525)
C4: (68.439,167.950,56.727)
N3: (67.845,169.148,57.053)
OP1: (63.169,162.718,59.936)
OP2: (63.378,163.301,57.451)
C2: (66.653,169.330,57.702)
C1': (64.840,168.337,58.940)
C3': (62.662,167.693,59.532)
O5': (63.461,165.055,59.185)
O4': (64.967,167.478,60.051)
C5': (63.608,165.548,60.507)
P: (63.770,163.539,58.857)
C4': (63.653,167.044,60.487)
C2': (63.509,167.987,58.296)
O2': (63.025,169.078,57.535)
N1: (66.032,168.179,58.100)
O4: (69.569,167.958,56.252)
O2: (66.175,170.434,57.889)
C6: (66.540,166.938,57.760)
C5: (67.687,166.787,57.098)
O3': (62.160,168.866,60.135)
N3: (67.845,169.148,57.053)
OP1: (63.169,162.718,59.936)
OP2: (63.378,163.301,57.451)
C2: (66.653,169.330,57.702)
C1': (64.840,168.337,58.940)
C3': (62.662,167.693,59.532)
O5': (63.461,165.055,59.185)
O4': (64.967,167.478,60.051)
C5': (63.608,165.548,60.507)
P: (63.770,163.539,58.857)
C4': (63.653,167.044,60.487)
C2': (63.509,167.987,58.296)
O2': (63.025,169.078,57.535)
N1: (66.032,168.179,58.100)
O4: (69.569,167.958,56.252)
O2: (66.175,170.434,57.889)
C6: (66.540,166.938,57.760)
C5: (67.687,166.787,57.098)
O3': (62.160,168.866,60.135)
Image (generated by PyMOL):