Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2396:A2395
Extra
PDB:
ATOM 1 O3' U A2395 66.308 119.522 138.886 1.00 42.05 O
ATOM 2 P C A2396 67.761 118.913 139.015 1.00 43.43 P
ATOM 3 OP1 C A2396 68.248 118.640 137.664 1.00 44.53 O
ATOM 4 OP2 C A2396 67.622 117.808 139.987 1.00 44.17 O
ATOM 5 O5' C A2396 68.638 120.095 139.594 1.00 42.33 O
ATOM 6 C5' C A2396 70.051 120.116 139.373 1.00 41.89 C
ATOM 7 C4' C A2396 70.520 121.538 139.247 1.00 42.94 C
ATOM 8 O4' C A2396 70.251 122.075 137.924 1.00 42.77 O
ATOM 9 C3' C A2396 69.808 122.492 140.180 1.00 42.57 C
ATOM 10 O3' C A2396 70.331 122.343 141.485 1.00 42.29 O
ATOM 11 C2' C A2396 70.100 123.824 139.507 1.00 43.78 C
ATOM 12 O2' C A2396 71.442 124.241 139.710 1.00 44.35 O
ATOM 13 C1' C A2396 69.891 123.442 138.037 1.00 43.02 C
ATOM 14 N1 C A2396 68.474 123.578 137.631 1.00 42.87 N
ATOM 15 C2 C A2396 67.969 124.851 137.366 1.00 42.11 C
ATOM 16 O2 C A2396 68.720 125.836 137.468 1.00 41.21 O
ATOM 17 N3 C A2396 66.670 124.984 137.011 1.00 43.06 N
ATOM 18 C4 C A2396 65.885 123.912 136.918 1.00 41.57 C
ATOM 19 N4 C A2396 64.608 124.100 136.573 1.00 41.35 N
ATOM 20 C5 C A2396 66.370 122.604 137.177 1.00 41.90 C
ATOM 21 C6 C A2396 67.658 122.481 137.525 1.00 42.06 C
ATOM 22 P C A2397 69.407 122.649 142.758 1.00 43.56 P
ATOM 23 OP1 C A2397 70.315 122.399 143.897 1.00 43.60 O
ATOM 24 OP2 C A2397 68.085 121.956 142.702 1.00 41.20 O
ATOM 25 O5' C A2397 69.200 124.223 142.693 1.00 45.30 O
TER
ATOM 1 O3' A B2394 62.893 115.198 136.044 1.00 41.03 O
ATOM 2 P U B2395 62.851 115.858 137.500 1.00 42.30 P
ATOM 3 OP1 U B2395 64.067 115.336 138.167 1.00 40.73 O
ATOM 4 OP2 U B2395 61.528 115.718 138.162 1.00 40.60 O
ATOM 5 O5' U B2395 63.053 117.396 137.189 1.00 39.74 O
ATOM 6 C5' U B2395 64.159 117.843 136.418 1.00 39.92 C
ATOM 7 C4' U B2395 64.828 118.980 137.137 1.00 40.61 C
ATOM 8 O4' U B2395 63.903 120.082 137.249 1.00 40.47 O
ATOM 9 C3' U B2395 65.237 118.665 138.566 1.00 40.45 C
ATOM 10 O3' U B2395 66.308 119.522 138.886 1.00 42.05 O
ATOM 11 C2' U B2395 64.028 119.096 139.370 1.00 40.22 C
ATOM 12 O2' U B2395 64.358 119.356 140.717 1.00 39.91 O
ATOM 13 C1' U B2395 63.646 120.360 138.609 1.00 39.39 C
ATOM 14 N1 U B2395 62.236 120.738 138.713 1.00 38.89 N
ATOM 15 C2 U B2395 61.954 122.037 139.036 1.00 37.51 C
ATOM 16 O2 U B2395 62.819 122.890 139.196 1.00 37.73 O
ATOM 17 N3 U B2395 60.623 122.311 139.149 1.00 38.02 N
ATOM 18 C4 U B2395 59.572 121.433 138.948 1.00 38.30 C
ATOM 19 O4 U B2395 58.422 121.800 139.166 1.00 40.16 O
ATOM 20 C5 U B2395 59.957 120.120 138.586 1.00 38.60 C
ATOM 21 C6 U B2395 61.242 119.822 138.493 1.00 38.85 C
ATOM 22 P C B2396 67.761 118.913 139.015 1.00 43.43 P
ATOM 23 OP1 C B2396 68.248 118.640 137.664 1.00 44.53 O
ATOM 24 OP2 C B2396 67.622 117.808 139.987 1.00 44.17 O
ATOM 25 O5' C B2396 68.638 120.095 139.594 1.00 42.33 O
TER
ATOM 2 P C A2396 67.761 118.913 139.015 1.00 43.43 P
ATOM 3 OP1 C A2396 68.248 118.640 137.664 1.00 44.53 O
ATOM 4 OP2 C A2396 67.622 117.808 139.987 1.00 44.17 O
ATOM 5 O5' C A2396 68.638 120.095 139.594 1.00 42.33 O
ATOM 6 C5' C A2396 70.051 120.116 139.373 1.00 41.89 C
ATOM 7 C4' C A2396 70.520 121.538 139.247 1.00 42.94 C
ATOM 8 O4' C A2396 70.251 122.075 137.924 1.00 42.77 O
ATOM 9 C3' C A2396 69.808 122.492 140.180 1.00 42.57 C
ATOM 10 O3' C A2396 70.331 122.343 141.485 1.00 42.29 O
ATOM 11 C2' C A2396 70.100 123.824 139.507 1.00 43.78 C
ATOM 12 O2' C A2396 71.442 124.241 139.710 1.00 44.35 O
ATOM 13 C1' C A2396 69.891 123.442 138.037 1.00 43.02 C
ATOM 14 N1 C A2396 68.474 123.578 137.631 1.00 42.87 N
ATOM 15 C2 C A2396 67.969 124.851 137.366 1.00 42.11 C
ATOM 16 O2 C A2396 68.720 125.836 137.468 1.00 41.21 O
ATOM 17 N3 C A2396 66.670 124.984 137.011 1.00 43.06 N
ATOM 18 C4 C A2396 65.885 123.912 136.918 1.00 41.57 C
ATOM 19 N4 C A2396 64.608 124.100 136.573 1.00 41.35 N
ATOM 20 C5 C A2396 66.370 122.604 137.177 1.00 41.90 C
ATOM 21 C6 C A2396 67.658 122.481 137.525 1.00 42.06 C
ATOM 22 P C A2397 69.407 122.649 142.758 1.00 43.56 P
ATOM 23 OP1 C A2397 70.315 122.399 143.897 1.00 43.60 O
ATOM 24 OP2 C A2397 68.085 121.956 142.702 1.00 41.20 O
ATOM 25 O5' C A2397 69.200 124.223 142.693 1.00 45.30 O
TER
ATOM 1 O3' A B2394 62.893 115.198 136.044 1.00 41.03 O
ATOM 2 P U B2395 62.851 115.858 137.500 1.00 42.30 P
ATOM 3 OP1 U B2395 64.067 115.336 138.167 1.00 40.73 O
ATOM 4 OP2 U B2395 61.528 115.718 138.162 1.00 40.60 O
ATOM 5 O5' U B2395 63.053 117.396 137.189 1.00 39.74 O
ATOM 6 C5' U B2395 64.159 117.843 136.418 1.00 39.92 C
ATOM 7 C4' U B2395 64.828 118.980 137.137 1.00 40.61 C
ATOM 8 O4' U B2395 63.903 120.082 137.249 1.00 40.47 O
ATOM 9 C3' U B2395 65.237 118.665 138.566 1.00 40.45 C
ATOM 10 O3' U B2395 66.308 119.522 138.886 1.00 42.05 O
ATOM 11 C2' U B2395 64.028 119.096 139.370 1.00 40.22 C
ATOM 12 O2' U B2395 64.358 119.356 140.717 1.00 39.91 O
ATOM 13 C1' U B2395 63.646 120.360 138.609 1.00 39.39 C
ATOM 14 N1 U B2395 62.236 120.738 138.713 1.00 38.89 N
ATOM 15 C2 U B2395 61.954 122.037 139.036 1.00 37.51 C
ATOM 16 O2 U B2395 62.819 122.890 139.196 1.00 37.73 O
ATOM 17 N3 U B2395 60.623 122.311 139.149 1.00 38.02 N
ATOM 18 C4 U B2395 59.572 121.433 138.948 1.00 38.30 C
ATOM 19 O4 U B2395 58.422 121.800 139.166 1.00 40.16 O
ATOM 20 C5 U B2395 59.957 120.120 138.586 1.00 38.60 C
ATOM 21 C6 U B2395 61.242 119.822 138.493 1.00 38.85 C
ATOM 22 P C B2396 67.761 118.913 139.015 1.00 43.43 P
ATOM 23 OP1 C B2396 68.248 118.640 137.664 1.00 44.53 O
ATOM 24 OP2 C B2396 67.622 117.808 139.987 1.00 44.17 O
ATOM 25 O5' C B2396 68.638 120.095 139.594 1.00 42.33 O
TER
Atoms:
C2: (67.969,124.851,137.366)
OP1: (68.248,118.640,137.664)
OP2: (67.622,117.808,139.987)
C4: (65.885,123.912,136.918)
O5': (68.638,120.095,139.594)
C3': (69.808,122.492,140.180)
C1': (69.891,123.442,138.037)
O4': (70.251,122.075,137.924)
C5': (70.051,120.116,139.373)
P: (67.761,118.913,139.015)
O2: (68.720,125.836,137.468)
C4': (70.520,121.538,139.247)
C2': (70.100,123.824,139.507)
O2': (71.442,124.241,139.710)
N1: (68.474,123.578,137.631)
N3: (66.670,124.984,137.011)
N4: (64.608,124.100,136.573)
C6: (67.658,122.481,137.525)
C5: (66.370,122.604,137.177)
O3': (70.331,122.343,141.485)
OP1: (68.248,118.640,137.664)
OP2: (67.622,117.808,139.987)
C4: (65.885,123.912,136.918)
O5': (68.638,120.095,139.594)
C3': (69.808,122.492,140.180)
C1': (69.891,123.442,138.037)
O4': (70.251,122.075,137.924)
C5': (70.051,120.116,139.373)
P: (67.761,118.913,139.015)
O2: (68.720,125.836,137.468)
C4': (70.520,121.538,139.247)
C2': (70.100,123.824,139.507)
O2': (71.442,124.241,139.710)
N1: (68.474,123.578,137.631)
N3: (66.670,124.984,137.011)
N4: (64.608,124.100,136.573)
C6: (67.658,122.481,137.525)
C5: (66.370,122.604,137.177)
O3': (70.331,122.343,141.485)
C4: (59.572,121.433,138.948)
N3: (60.623,122.311,139.149)
OP1: (64.067,115.336,138.167)
OP2: (61.528,115.718,138.162)
C2: (61.954,122.037,139.036)
C1': (63.646,120.360,138.609)
C3': (65.237,118.665,138.566)
O5': (63.053,117.396,137.189)
O4': (63.903,120.082,137.249)
C5': (64.159,117.843,136.418)
P: (62.851,115.858,137.500)
C4': (64.828,118.980,137.137)
C2': (64.028,119.096,139.370)
O2': (64.358,119.356,140.717)
N1: (62.236,120.738,138.713)
O4: (58.422,121.800,139.166)
O2: (62.819,122.890,139.196)
C6: (61.242,119.822,138.493)
C5: (59.957,120.120,138.586)
O3': (66.308,119.522,138.886)
N3: (60.623,122.311,139.149)
OP1: (64.067,115.336,138.167)
OP2: (61.528,115.718,138.162)
C2: (61.954,122.037,139.036)
C1': (63.646,120.360,138.609)
C3': (65.237,118.665,138.566)
O5': (63.053,117.396,137.189)
O4': (63.903,120.082,137.249)
C5': (64.159,117.843,136.418)
P: (62.851,115.858,137.500)
C4': (64.828,118.980,137.137)
C2': (64.028,119.096,139.370)
O2': (64.358,119.356,140.717)
N1: (62.236,120.738,138.713)
O4: (58.422,121.800,139.166)
O2: (62.819,122.890,139.196)
C6: (61.242,119.822,138.493)
C5: (59.957,120.120,138.586)
O3': (66.308,119.522,138.886)
Image (generated by PyMOL):