Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A970:A968
Extra
PDB:
ATOM 1 O3' C A 969 58.241 52.962 111.139 1.00 46.59 O
ATOM 2 P C A 970 57.022 53.572 110.293 1.00 47.16 P
ATOM 3 OP1 C A 970 56.196 52.438 109.840 1.00 46.83 O
ATOM 4 OP2 C A 970 57.560 54.543 109.294 1.00 47.20 O
ATOM 5 O5' C A 970 56.203 54.364 111.399 1.00 44.00 O
ATOM 6 C5' C A 970 55.018 55.092 111.080 1.00 42.58 C
ATOM 7 C4' C A 970 54.407 55.630 112.347 1.00 44.68 C
ATOM 8 O4' C A 970 55.393 56.419 113.052 1.00 45.69 O
ATOM 9 C3' C A 970 53.232 56.564 112.174 1.00 43.44 C
ATOM 10 O3' C A 970 52.066 55.779 112.001 1.00 44.04 O
ATOM 11 C2' C A 970 53.259 57.356 113.479 1.00 43.36 C
ATOM 12 O2' C A 970 52.759 56.677 114.609 1.00 42.88 O
ATOM 13 C1' C A 970 54.761 57.507 113.704 1.00 44.80 C
ATOM 14 N1 C A 970 55.285 58.766 113.150 1.00 46.87 N
ATOM 15 C2 C A 970 54.794 59.975 113.653 1.00 47.40 C
ATOM 16 O2 C A 970 53.938 59.958 114.551 1.00 48.43 O
ATOM 17 N3 C A 970 55.257 61.131 113.149 1.00 47.82 N
ATOM 18 C4 C A 970 56.174 61.123 112.183 1.00 47.57 C
ATOM 19 N4 C A 970 56.599 62.298 111.724 1.00 47.18 N
ATOM 20 C5 C A 970 56.696 59.910 111.650 1.00 48.00 C
ATOM 21 C6 C A 970 56.229 58.766 112.158 1.00 47.87 C
ATOM 22 P A A 971 51.158 55.965 110.689 1.00 45.27 P
ATOM 23 OP1 A A 971 50.002 55.042 110.837 1.00 44.01 O
ATOM 24 OP2 A A 971 51.990 55.911 109.449 1.00 44.00 O
ATOM 25 O5' A A 971 50.610 57.447 110.851 1.00 45.30 O
TER
ATOM 1 O3' C B 967 65.705 62.852 108.495 1.00 39.85 O
ATOM 2 P U B 968 64.470 62.092 107.781 1.00 42.20 P
ATOM 3 OP1 U B 968 65.077 61.165 106.806 1.00 41.74 O
ATOM 4 OP2 U B 968 63.464 63.089 107.309 1.00 42.60 O
ATOM 5 O5' U B 968 63.790 61.191 108.917 1.00 42.17 O
ATOM 6 C5' U B 968 64.437 59.999 109.434 1.00 43.83 C
ATOM 7 C4' U B 968 63.518 59.269 110.394 1.00 44.15 C
ATOM 8 O4' U B 968 63.050 60.220 111.387 1.00 44.40 O
ATOM 9 C3' U B 968 62.265 58.683 109.751 1.00 44.26 C
ATOM 10 O3' U B 968 61.788 57.553 110.485 1.00 44.63 O
ATOM 11 C2' U B 968 61.262 59.819 109.911 1.00 45.26 C
ATOM 12 O2' U B 968 59.915 59.355 109.865 1.00 44.92 O
ATOM 13 C1' U B 968 61.645 60.359 111.289 1.00 44.29 C
ATOM 14 N1 U B 968 61.295 61.770 111.520 1.00 44.97 N
ATOM 15 C2 U B 968 60.300 62.055 112.451 1.00 45.94 C
ATOM 16 O2 U B 968 59.681 61.196 113.046 1.00 46.57 O
ATOM 17 N3 U B 968 60.058 63.392 112.652 1.00 46.66 N
ATOM 18 C4 U B 968 60.680 64.450 112.018 1.00 47.56 C
ATOM 19 O4 U B 968 60.330 65.608 112.275 1.00 47.94 O
ATOM 20 C5 U B 968 61.677 64.067 111.063 1.00 46.92 C
ATOM 21 C6 U B 968 61.940 62.775 110.853 1.00 45.43 C
ATOM 22 P C B 969 61.758 56.093 109.812 1.00 44.54 P
ATOM 23 OP1 C B 969 63.129 55.594 109.948 1.00 44.72 O
ATOM 24 OP2 C B 969 61.105 56.079 108.484 1.00 44.73 O
ATOM 25 O5' C B 969 60.841 55.257 110.807 1.00 45.30 O
TER
ATOM 2 P C A 970 57.022 53.572 110.293 1.00 47.16 P
ATOM 3 OP1 C A 970 56.196 52.438 109.840 1.00 46.83 O
ATOM 4 OP2 C A 970 57.560 54.543 109.294 1.00 47.20 O
ATOM 5 O5' C A 970 56.203 54.364 111.399 1.00 44.00 O
ATOM 6 C5' C A 970 55.018 55.092 111.080 1.00 42.58 C
ATOM 7 C4' C A 970 54.407 55.630 112.347 1.00 44.68 C
ATOM 8 O4' C A 970 55.393 56.419 113.052 1.00 45.69 O
ATOM 9 C3' C A 970 53.232 56.564 112.174 1.00 43.44 C
ATOM 10 O3' C A 970 52.066 55.779 112.001 1.00 44.04 O
ATOM 11 C2' C A 970 53.259 57.356 113.479 1.00 43.36 C
ATOM 12 O2' C A 970 52.759 56.677 114.609 1.00 42.88 O
ATOM 13 C1' C A 970 54.761 57.507 113.704 1.00 44.80 C
ATOM 14 N1 C A 970 55.285 58.766 113.150 1.00 46.87 N
ATOM 15 C2 C A 970 54.794 59.975 113.653 1.00 47.40 C
ATOM 16 O2 C A 970 53.938 59.958 114.551 1.00 48.43 O
ATOM 17 N3 C A 970 55.257 61.131 113.149 1.00 47.82 N
ATOM 18 C4 C A 970 56.174 61.123 112.183 1.00 47.57 C
ATOM 19 N4 C A 970 56.599 62.298 111.724 1.00 47.18 N
ATOM 20 C5 C A 970 56.696 59.910 111.650 1.00 48.00 C
ATOM 21 C6 C A 970 56.229 58.766 112.158 1.00 47.87 C
ATOM 22 P A A 971 51.158 55.965 110.689 1.00 45.27 P
ATOM 23 OP1 A A 971 50.002 55.042 110.837 1.00 44.01 O
ATOM 24 OP2 A A 971 51.990 55.911 109.449 1.00 44.00 O
ATOM 25 O5' A A 971 50.610 57.447 110.851 1.00 45.30 O
TER
ATOM 1 O3' C B 967 65.705 62.852 108.495 1.00 39.85 O
ATOM 2 P U B 968 64.470 62.092 107.781 1.00 42.20 P
ATOM 3 OP1 U B 968 65.077 61.165 106.806 1.00 41.74 O
ATOM 4 OP2 U B 968 63.464 63.089 107.309 1.00 42.60 O
ATOM 5 O5' U B 968 63.790 61.191 108.917 1.00 42.17 O
ATOM 6 C5' U B 968 64.437 59.999 109.434 1.00 43.83 C
ATOM 7 C4' U B 968 63.518 59.269 110.394 1.00 44.15 C
ATOM 8 O4' U B 968 63.050 60.220 111.387 1.00 44.40 O
ATOM 9 C3' U B 968 62.265 58.683 109.751 1.00 44.26 C
ATOM 10 O3' U B 968 61.788 57.553 110.485 1.00 44.63 O
ATOM 11 C2' U B 968 61.262 59.819 109.911 1.00 45.26 C
ATOM 12 O2' U B 968 59.915 59.355 109.865 1.00 44.92 O
ATOM 13 C1' U B 968 61.645 60.359 111.289 1.00 44.29 C
ATOM 14 N1 U B 968 61.295 61.770 111.520 1.00 44.97 N
ATOM 15 C2 U B 968 60.300 62.055 112.451 1.00 45.94 C
ATOM 16 O2 U B 968 59.681 61.196 113.046 1.00 46.57 O
ATOM 17 N3 U B 968 60.058 63.392 112.652 1.00 46.66 N
ATOM 18 C4 U B 968 60.680 64.450 112.018 1.00 47.56 C
ATOM 19 O4 U B 968 60.330 65.608 112.275 1.00 47.94 O
ATOM 20 C5 U B 968 61.677 64.067 111.063 1.00 46.92 C
ATOM 21 C6 U B 968 61.940 62.775 110.853 1.00 45.43 C
ATOM 22 P C B 969 61.758 56.093 109.812 1.00 44.54 P
ATOM 23 OP1 C B 969 63.129 55.594 109.948 1.00 44.72 O
ATOM 24 OP2 C B 969 61.105 56.079 108.484 1.00 44.73 O
ATOM 25 O5' C B 969 60.841 55.257 110.807 1.00 45.30 O
TER
Atoms:
C2: (54.794,59.975,113.653)
OP1: (56.196,52.438,109.840)
OP2: (57.560,54.543,109.294)
C4: (56.174,61.123,112.183)
O5': (56.203,54.364,111.399)
C3': (53.232,56.564,112.174)
C1': (54.761,57.507,113.704)
O4': (55.393,56.419,113.052)
C5': (55.018,55.092,111.080)
P: (57.022,53.572,110.293)
O2: (53.938,59.958,114.551)
C4': (54.407,55.630,112.347)
C2': (53.259,57.356,113.479)
O2': (52.759,56.677,114.609)
N1: (55.285,58.766,113.150)
N3: (55.257,61.131,113.149)
N4: (56.599,62.298,111.724)
C6: (56.229,58.766,112.158)
C5: (56.696,59.910,111.650)
O3': (52.066,55.779,112.001)
OP1: (56.196,52.438,109.840)
OP2: (57.560,54.543,109.294)
C4: (56.174,61.123,112.183)
O5': (56.203,54.364,111.399)
C3': (53.232,56.564,112.174)
C1': (54.761,57.507,113.704)
O4': (55.393,56.419,113.052)
C5': (55.018,55.092,111.080)
P: (57.022,53.572,110.293)
O2: (53.938,59.958,114.551)
C4': (54.407,55.630,112.347)
C2': (53.259,57.356,113.479)
O2': (52.759,56.677,114.609)
N1: (55.285,58.766,113.150)
N3: (55.257,61.131,113.149)
N4: (56.599,62.298,111.724)
C6: (56.229,58.766,112.158)
C5: (56.696,59.910,111.650)
O3': (52.066,55.779,112.001)
C4: (60.680,64.450,112.018)
N3: (60.058,63.392,112.652)
OP1: (65.077,61.165,106.806)
OP2: (63.464,63.089,107.309)
C2: (60.300,62.055,112.451)
C1': (61.645,60.359,111.289)
C3': (62.265,58.683,109.751)
O5': (63.790,61.191,108.917)
O4': (63.050,60.220,111.387)
C5': (64.437,59.999,109.434)
P: (64.470,62.092,107.781)
C4': (63.518,59.269,110.394)
C2': (61.262,59.819,109.911)
O2': (59.915,59.355,109.865)
N1: (61.295,61.770,111.520)
O4: (60.330,65.608,112.275)
O2: (59.681,61.196,113.046)
C6: (61.940,62.775,110.853)
C5: (61.677,64.067,111.063)
O3': (61.788,57.553,110.485)
N3: (60.058,63.392,112.652)
OP1: (65.077,61.165,106.806)
OP2: (63.464,63.089,107.309)
C2: (60.300,62.055,112.451)
C1': (61.645,60.359,111.289)
C3': (62.265,58.683,109.751)
O5': (63.790,61.191,108.917)
O4': (63.050,60.220,111.387)
C5': (64.437,59.999,109.434)
P: (64.470,62.092,107.781)
C4': (63.518,59.269,110.394)
C2': (61.262,59.819,109.911)
O2': (59.915,59.355,109.865)
N1: (61.295,61.770,111.520)
O4: (60.330,65.608,112.275)
O2: (59.681,61.196,113.046)
C6: (61.940,62.775,110.853)
C5: (61.677,64.067,111.063)
O3': (61.788,57.553,110.485)
Image (generated by PyMOL):