Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTA:A17:A15
Extra
PDB:
ATOM 1 O3' U A 16 3.122 26.384 8.191 1.00 52.02 O
ATOM 2 P C A 17 2.590 24.876 8.383 1.00 52.42 P
ATOM 3 OP1 C A 17 1.253 24.668 7.768 1.00 50.96 O
ATOM 4 OP2 C A 17 2.779 24.579 9.820 1.00 52.82 O
ATOM 5 O5' C A 17 3.690 24.038 7.546 1.00 53.02 O
ATOM 6 C5' C A 17 5.047 24.527 7.360 1.00 51.50 C
ATOM 7 C4' C A 17 5.644 23.960 6.086 1.00 50.50 C
ATOM 8 O4' C A 17 4.949 24.531 4.955 1.00 50.38 O
ATOM 9 C3' C A 17 7.119 24.274 5.866 1.00 50.31 C
ATOM 10 O3' C A 17 7.975 23.244 6.420 1.00 48.31 O
ATOM 11 C2' C A 17 7.258 24.402 4.337 1.00 50.19 C
ATOM 12 O2' C A 17 7.820 23.268 3.714 1.00 50.98 O
ATOM 13 C1' C A 17 5.824 24.635 3.852 1.00 50.54 C
ATOM 14 N1 C A 17 5.598 25.971 3.216 1.00 51.74 N
ATOM 15 C2 C A 17 6.178 27.156 3.727 1.00 51.86 C
ATOM 16 O2 C A 17 6.903 27.132 4.722 1.00 51.38 O
ATOM 17 N3 C A 17 5.929 28.324 3.098 1.00 52.37 N
ATOM 18 C4 C A 17 5.148 28.360 2.025 1.00 53.10 C
ATOM 19 N4 C A 17 4.939 29.538 1.455 1.00 53.59 N
ATOM 20 C5 C A 17 4.542 27.187 1.494 1.00 53.26 C
ATOM 21 C6 C A 17 4.790 26.028 2.116 1.00 52.70 C
ATOM 22 P U A 18 8.850 23.483 7.739 1.00 47.07 P
ATOM 23 OP1 U A 18 10.097 22.689 7.627 1.00 48.67 O
ATOM 24 OP2 U A 18 7.911 23.247 8.863 1.00 45.29 O
ATOM 25 O5' U A 18 9.303 25.023 7.755 1.00 47.70 O
TER
ATOM 1 O3' C B 14 0.391 24.157 -3.855 1.00 51.98 O
ATOM 2 P U B 15 -0.529 24.765 -2.691 1.00 53.27 P
ATOM 3 OP1 U B 15 -1.617 23.784 -2.494 1.00 54.10 O
ATOM 4 OP2 U B 15 -0.875 26.180 -2.967 1.00 52.53 O
ATOM 5 O5' U B 15 0.424 24.715 -1.416 1.00 54.28 O
ATOM 6 C5' U B 15 -0.065 25.051 -0.145 1.00 56.37 C
ATOM 7 C4' U B 15 0.668 26.258 0.399 1.00 58.01 C
ATOM 8 O4' U B 15 1.611 26.764 -0.586 1.00 59.86 O
ATOM 9 C3' U B 15 -0.206 27.458 0.738 1.00 59.09 C
ATOM 10 O3' U B 15 0.256 28.039 1.930 1.00 58.32 O
ATOM 11 C2' U B 15 0.013 28.392 -0.436 1.00 60.12 C
ATOM 12 O2' U B 15 -0.272 29.741 -0.144 1.00 60.30 O
ATOM 13 C1' U B 15 1.492 28.165 -0.621 1.00 61.03 C
ATOM 14 N1 U B 15 2.060 28.671 -1.878 1.00 63.55 N
ATOM 15 C2 U B 15 3.004 29.671 -1.837 1.00 65.79 C
ATOM 16 O2 U B 15 3.382 30.179 -0.805 1.00 66.30 O
ATOM 17 N3 U B 15 3.502 30.056 -3.062 1.00 67.48 N
ATOM 18 C4 U B 15 3.137 29.549 -4.302 1.00 67.00 C
ATOM 19 O4 U B 15 3.654 29.997 -5.322 1.00 66.67 O
ATOM 20 C5 U B 15 2.138 28.508 -4.259 1.00 66.19 C
ATOM 21 C6 U B 15 1.668 28.113 -3.068 1.00 65.12 C
ATOM 22 P U B 16 -0.476 27.748 3.310 1.00 56.69 P
ATOM 23 OP1 U B 16 -0.996 26.360 3.283 1.00 56.58 O
ATOM 24 OP2 U B 16 -1.392 28.891 3.588 1.00 55.08 O
ATOM 25 O5' U B 16 0.807 27.823 4.260 1.00 52.67 O
TER
ATOM 2 P C A 17 2.590 24.876 8.383 1.00 52.42 P
ATOM 3 OP1 C A 17 1.253 24.668 7.768 1.00 50.96 O
ATOM 4 OP2 C A 17 2.779 24.579 9.820 1.00 52.82 O
ATOM 5 O5' C A 17 3.690 24.038 7.546 1.00 53.02 O
ATOM 6 C5' C A 17 5.047 24.527 7.360 1.00 51.50 C
ATOM 7 C4' C A 17 5.644 23.960 6.086 1.00 50.50 C
ATOM 8 O4' C A 17 4.949 24.531 4.955 1.00 50.38 O
ATOM 9 C3' C A 17 7.119 24.274 5.866 1.00 50.31 C
ATOM 10 O3' C A 17 7.975 23.244 6.420 1.00 48.31 O
ATOM 11 C2' C A 17 7.258 24.402 4.337 1.00 50.19 C
ATOM 12 O2' C A 17 7.820 23.268 3.714 1.00 50.98 O
ATOM 13 C1' C A 17 5.824 24.635 3.852 1.00 50.54 C
ATOM 14 N1 C A 17 5.598 25.971 3.216 1.00 51.74 N
ATOM 15 C2 C A 17 6.178 27.156 3.727 1.00 51.86 C
ATOM 16 O2 C A 17 6.903 27.132 4.722 1.00 51.38 O
ATOM 17 N3 C A 17 5.929 28.324 3.098 1.00 52.37 N
ATOM 18 C4 C A 17 5.148 28.360 2.025 1.00 53.10 C
ATOM 19 N4 C A 17 4.939 29.538 1.455 1.00 53.59 N
ATOM 20 C5 C A 17 4.542 27.187 1.494 1.00 53.26 C
ATOM 21 C6 C A 17 4.790 26.028 2.116 1.00 52.70 C
ATOM 22 P U A 18 8.850 23.483 7.739 1.00 47.07 P
ATOM 23 OP1 U A 18 10.097 22.689 7.627 1.00 48.67 O
ATOM 24 OP2 U A 18 7.911 23.247 8.863 1.00 45.29 O
ATOM 25 O5' U A 18 9.303 25.023 7.755 1.00 47.70 O
TER
ATOM 1 O3' C B 14 0.391 24.157 -3.855 1.00 51.98 O
ATOM 2 P U B 15 -0.529 24.765 -2.691 1.00 53.27 P
ATOM 3 OP1 U B 15 -1.617 23.784 -2.494 1.00 54.10 O
ATOM 4 OP2 U B 15 -0.875 26.180 -2.967 1.00 52.53 O
ATOM 5 O5' U B 15 0.424 24.715 -1.416 1.00 54.28 O
ATOM 6 C5' U B 15 -0.065 25.051 -0.145 1.00 56.37 C
ATOM 7 C4' U B 15 0.668 26.258 0.399 1.00 58.01 C
ATOM 8 O4' U B 15 1.611 26.764 -0.586 1.00 59.86 O
ATOM 9 C3' U B 15 -0.206 27.458 0.738 1.00 59.09 C
ATOM 10 O3' U B 15 0.256 28.039 1.930 1.00 58.32 O
ATOM 11 C2' U B 15 0.013 28.392 -0.436 1.00 60.12 C
ATOM 12 O2' U B 15 -0.272 29.741 -0.144 1.00 60.30 O
ATOM 13 C1' U B 15 1.492 28.165 -0.621 1.00 61.03 C
ATOM 14 N1 U B 15 2.060 28.671 -1.878 1.00 63.55 N
ATOM 15 C2 U B 15 3.004 29.671 -1.837 1.00 65.79 C
ATOM 16 O2 U B 15 3.382 30.179 -0.805 1.00 66.30 O
ATOM 17 N3 U B 15 3.502 30.056 -3.062 1.00 67.48 N
ATOM 18 C4 U B 15 3.137 29.549 -4.302 1.00 67.00 C
ATOM 19 O4 U B 15 3.654 29.997 -5.322 1.00 66.67 O
ATOM 20 C5 U B 15 2.138 28.508 -4.259 1.00 66.19 C
ATOM 21 C6 U B 15 1.668 28.113 -3.068 1.00 65.12 C
ATOM 22 P U B 16 -0.476 27.748 3.310 1.00 56.69 P
ATOM 23 OP1 U B 16 -0.996 26.360 3.283 1.00 56.58 O
ATOM 24 OP2 U B 16 -1.392 28.891 3.588 1.00 55.08 O
ATOM 25 O5' U B 16 0.807 27.823 4.260 1.00 52.67 O
TER
Atoms:
C2: (6.178,27.156,3.727)
OP1: (1.253,24.668,7.768)
OP2: (2.779,24.579,9.820)
C4: (5.148,28.360,2.025)
O5': (3.690,24.038,7.546)
C3': (7.119,24.274,5.866)
C1': (5.824,24.635,3.852)
O4': (4.949,24.531,4.955)
C5': (5.047,24.527,7.360)
P: (2.590,24.876,8.383)
O2: (6.903,27.132,4.722)
C4': (5.644,23.960,6.086)
C2': (7.258,24.402,4.337)
O2': (7.820,23.268,3.714)
N1: (5.598,25.971,3.216)
N3: (5.929,28.324,3.098)
N4: (4.939,29.538,1.455)
C6: (4.790,26.028,2.116)
C5: (4.542,27.187,1.494)
O3': (7.975,23.244,6.420)
OP1: (1.253,24.668,7.768)
OP2: (2.779,24.579,9.820)
C4: (5.148,28.360,2.025)
O5': (3.690,24.038,7.546)
C3': (7.119,24.274,5.866)
C1': (5.824,24.635,3.852)
O4': (4.949,24.531,4.955)
C5': (5.047,24.527,7.360)
P: (2.590,24.876,8.383)
O2: (6.903,27.132,4.722)
C4': (5.644,23.960,6.086)
C2': (7.258,24.402,4.337)
O2': (7.820,23.268,3.714)
N1: (5.598,25.971,3.216)
N3: (5.929,28.324,3.098)
N4: (4.939,29.538,1.455)
C6: (4.790,26.028,2.116)
C5: (4.542,27.187,1.494)
O3': (7.975,23.244,6.420)
C4: (3.137,29.549,-4.302)
N3: (3.502,30.056,-3.062)
OP1: (-1.617,23.784,-2.494)
OP2: (-0.875,26.180,-2.967)
C2: (3.004,29.671,-1.837)
C1': (1.492,28.165,-0.621)
C3': (-0.206,27.458,0.738)
O5': (0.424,24.715,-1.416)
O4': (1.611,26.764,-0.586)
C5': (-0.065,25.051,-0.145)
P: (-0.529,24.765,-2.691)
C4': (0.668,26.258,0.399)
C2': (0.013,28.392,-0.436)
O2': (-0.272,29.741,-0.144)
N1: (2.060,28.671,-1.878)
O4: (3.654,29.997,-5.322)
O2: (3.382,30.179,-0.805)
C6: (1.668,28.113,-3.068)
C5: (2.138,28.508,-4.259)
O3': (0.256,28.039,1.930)
N3: (3.502,30.056,-3.062)
OP1: (-1.617,23.784,-2.494)
OP2: (-0.875,26.180,-2.967)
C2: (3.004,29.671,-1.837)
C1': (1.492,28.165,-0.621)
C3': (-0.206,27.458,0.738)
O5': (0.424,24.715,-1.416)
O4': (1.611,26.764,-0.586)
C5': (-0.065,25.051,-0.145)
P: (-0.529,24.765,-2.691)
C4': (0.668,26.258,0.399)
C2': (0.013,28.392,-0.436)
O2': (-0.272,29.741,-0.144)
N1: (2.060,28.671,-1.878)
O4: (3.654,29.997,-5.322)
O2: (3.382,30.179,-0.805)
C6: (1.668,28.113,-3.068)
C5: (2.138,28.508,-4.259)
O3': (0.256,28.039,1.930)
Image (generated by PyMOL):