Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTB:A17:A15
Extra
PDB:
ATOM 1 O3' U A 16 3.749 27.051 7.945 1.00 57.68 O
ATOM 2 P C A 17 3.676 25.529 8.526 1.00 56.21 P
ATOM 3 OP1 C A 17 2.243 25.163 8.669 1.00 55.40 O
ATOM 4 OP2 C A 17 4.629 25.376 9.672 1.00 54.09 O
ATOM 5 O5' C A 17 4.290 24.718 7.297 1.00 55.11 O
ATOM 6 C5' C A 17 5.707 24.607 7.191 1.00 53.89 C
ATOM 7 C4' C A 17 6.134 24.089 5.830 1.00 52.42 C
ATOM 8 O4' C A 17 5.353 24.709 4.777 1.00 51.14 O
ATOM 9 C3' C A 17 7.574 24.392 5.492 1.00 51.68 C
ATOM 10 O3' C A 17 8.421 23.381 6.004 1.00 51.92 O
ATOM 11 C2' C A 17 7.578 24.446 3.964 1.00 51.19 C
ATOM 12 O2' C A 17 7.988 23.226 3.379 1.00 53.09 O
ATOM 13 C1' C A 17 6.121 24.787 3.597 1.00 49.98 C
ATOM 14 N1 C A 17 5.935 26.169 2.985 1.00 48.46 N
ATOM 15 C2 C A 17 6.533 27.309 3.558 1.00 46.82 C
ATOM 16 O2 C A 17 7.217 27.211 4.571 1.00 46.71 O
ATOM 17 N3 C A 17 6.348 28.511 2.977 1.00 46.15 N
ATOM 18 C4 C A 17 5.608 28.628 1.880 1.00 46.86 C
ATOM 19 N4 C A 17 5.464 29.853 1.358 1.00 45.93 N
ATOM 20 C5 C A 17 4.982 27.495 1.276 1.00 47.42 C
ATOM 21 C6 C A 17 5.173 26.301 1.854 1.00 47.91 C
ATOM 22 P U A 18 9.304 23.634 7.311 1.00 52.11 P
ATOM 23 OP1 U A 18 10.412 22.650 7.349 1.00 51.98 O
ATOM 24 OP2 U A 18 8.348 23.690 8.421 1.00 52.52 O
ATOM 25 O5' U A 18 9.954 25.083 7.131 1.00 52.84 O
TER
ATOM 1 O3' C B 14 0.788 24.013 -3.439 1.00 48.08 O
ATOM 2 P U B 15 -0.487 24.900 -3.053 1.00 49.44 P
ATOM 3 OP1 U B 15 -1.493 23.937 -2.550 1.00 49.72 O
ATOM 4 OP2 U B 15 -0.787 25.762 -4.228 1.00 48.99 O
ATOM 5 O5' U B 15 -0.022 25.830 -1.838 1.00 49.70 O
ATOM 6 C5' U B 15 0.572 25.257 -0.695 1.00 51.81 C
ATOM 7 C4' U B 15 1.257 26.318 0.145 1.00 53.44 C
ATOM 8 O4' U B 15 2.232 27.029 -0.670 1.00 54.20 O
ATOM 9 C3' U B 15 0.327 27.388 0.716 1.00 54.03 C
ATOM 10 O3' U B 15 0.794 27.786 1.982 1.00 54.88 O
ATOM 11 C2' U B 15 0.402 28.488 -0.329 1.00 54.32 C
ATOM 12 O2' U B 15 0.088 29.760 0.205 1.00 54.64 O
ATOM 13 C1' U B 15 1.875 28.395 -0.773 1.00 54.36 C
ATOM 14 N1 U B 15 2.167 28.856 -2.197 1.00 53.62 N
ATOM 15 C2 U B 15 3.150 29.816 -2.441 1.00 53.49 C
ATOM 16 O2 U B 15 3.818 30.352 -1.569 1.00 53.10 O
ATOM 17 N3 U B 15 3.319 30.146 -3.769 1.00 53.09 N
ATOM 18 C4 U B 15 2.636 29.629 -4.856 1.00 52.70 C
ATOM 19 O4 U B 15 2.907 30.019 -5.982 1.00 50.19 O
ATOM 20 C5 U B 15 1.645 28.635 -4.530 1.00 53.29 C
ATOM 21 C6 U B 15 1.459 28.293 -3.244 1.00 53.21 C
ATOM 22 P U B 16 -0.102 27.876 3.327 1.00 58.12 P
ATOM 23 OP1 U B 16 -0.907 26.634 3.411 1.00 58.09 O
ATOM 24 OP2 U B 16 -0.765 29.203 3.244 1.00 57.43 O
ATOM 25 O5' U B 16 0.930 27.869 4.551 1.00 55.73 O
TER
ATOM 2 P C A 17 3.676 25.529 8.526 1.00 56.21 P
ATOM 3 OP1 C A 17 2.243 25.163 8.669 1.00 55.40 O
ATOM 4 OP2 C A 17 4.629 25.376 9.672 1.00 54.09 O
ATOM 5 O5' C A 17 4.290 24.718 7.297 1.00 55.11 O
ATOM 6 C5' C A 17 5.707 24.607 7.191 1.00 53.89 C
ATOM 7 C4' C A 17 6.134 24.089 5.830 1.00 52.42 C
ATOM 8 O4' C A 17 5.353 24.709 4.777 1.00 51.14 O
ATOM 9 C3' C A 17 7.574 24.392 5.492 1.00 51.68 C
ATOM 10 O3' C A 17 8.421 23.381 6.004 1.00 51.92 O
ATOM 11 C2' C A 17 7.578 24.446 3.964 1.00 51.19 C
ATOM 12 O2' C A 17 7.988 23.226 3.379 1.00 53.09 O
ATOM 13 C1' C A 17 6.121 24.787 3.597 1.00 49.98 C
ATOM 14 N1 C A 17 5.935 26.169 2.985 1.00 48.46 N
ATOM 15 C2 C A 17 6.533 27.309 3.558 1.00 46.82 C
ATOM 16 O2 C A 17 7.217 27.211 4.571 1.00 46.71 O
ATOM 17 N3 C A 17 6.348 28.511 2.977 1.00 46.15 N
ATOM 18 C4 C A 17 5.608 28.628 1.880 1.00 46.86 C
ATOM 19 N4 C A 17 5.464 29.853 1.358 1.00 45.93 N
ATOM 20 C5 C A 17 4.982 27.495 1.276 1.00 47.42 C
ATOM 21 C6 C A 17 5.173 26.301 1.854 1.00 47.91 C
ATOM 22 P U A 18 9.304 23.634 7.311 1.00 52.11 P
ATOM 23 OP1 U A 18 10.412 22.650 7.349 1.00 51.98 O
ATOM 24 OP2 U A 18 8.348 23.690 8.421 1.00 52.52 O
ATOM 25 O5' U A 18 9.954 25.083 7.131 1.00 52.84 O
TER
ATOM 1 O3' C B 14 0.788 24.013 -3.439 1.00 48.08 O
ATOM 2 P U B 15 -0.487 24.900 -3.053 1.00 49.44 P
ATOM 3 OP1 U B 15 -1.493 23.937 -2.550 1.00 49.72 O
ATOM 4 OP2 U B 15 -0.787 25.762 -4.228 1.00 48.99 O
ATOM 5 O5' U B 15 -0.022 25.830 -1.838 1.00 49.70 O
ATOM 6 C5' U B 15 0.572 25.257 -0.695 1.00 51.81 C
ATOM 7 C4' U B 15 1.257 26.318 0.145 1.00 53.44 C
ATOM 8 O4' U B 15 2.232 27.029 -0.670 1.00 54.20 O
ATOM 9 C3' U B 15 0.327 27.388 0.716 1.00 54.03 C
ATOM 10 O3' U B 15 0.794 27.786 1.982 1.00 54.88 O
ATOM 11 C2' U B 15 0.402 28.488 -0.329 1.00 54.32 C
ATOM 12 O2' U B 15 0.088 29.760 0.205 1.00 54.64 O
ATOM 13 C1' U B 15 1.875 28.395 -0.773 1.00 54.36 C
ATOM 14 N1 U B 15 2.167 28.856 -2.197 1.00 53.62 N
ATOM 15 C2 U B 15 3.150 29.816 -2.441 1.00 53.49 C
ATOM 16 O2 U B 15 3.818 30.352 -1.569 1.00 53.10 O
ATOM 17 N3 U B 15 3.319 30.146 -3.769 1.00 53.09 N
ATOM 18 C4 U B 15 2.636 29.629 -4.856 1.00 52.70 C
ATOM 19 O4 U B 15 2.907 30.019 -5.982 1.00 50.19 O
ATOM 20 C5 U B 15 1.645 28.635 -4.530 1.00 53.29 C
ATOM 21 C6 U B 15 1.459 28.293 -3.244 1.00 53.21 C
ATOM 22 P U B 16 -0.102 27.876 3.327 1.00 58.12 P
ATOM 23 OP1 U B 16 -0.907 26.634 3.411 1.00 58.09 O
ATOM 24 OP2 U B 16 -0.765 29.203 3.244 1.00 57.43 O
ATOM 25 O5' U B 16 0.930 27.869 4.551 1.00 55.73 O
TER
Atoms:
C2: (6.533,27.309,3.558)
OP1: (2.243,25.163,8.669)
OP2: (4.629,25.376,9.672)
C4: (5.608,28.628,1.880)
O5': (4.290,24.718,7.297)
C3': (7.574,24.392,5.492)
C1': (6.121,24.787,3.597)
O4': (5.353,24.709,4.777)
C5': (5.707,24.607,7.191)
P: (3.676,25.529,8.526)
O2: (7.217,27.211,4.571)
C4': (6.134,24.089,5.830)
C2': (7.578,24.446,3.964)
O2': (7.988,23.226,3.379)
N1: (5.935,26.169,2.985)
N3: (6.348,28.511,2.977)
N4: (5.464,29.853,1.358)
C6: (5.173,26.301,1.854)
C5: (4.982,27.495,1.276)
O3': (8.421,23.381,6.004)
OP1: (2.243,25.163,8.669)
OP2: (4.629,25.376,9.672)
C4: (5.608,28.628,1.880)
O5': (4.290,24.718,7.297)
C3': (7.574,24.392,5.492)
C1': (6.121,24.787,3.597)
O4': (5.353,24.709,4.777)
C5': (5.707,24.607,7.191)
P: (3.676,25.529,8.526)
O2: (7.217,27.211,4.571)
C4': (6.134,24.089,5.830)
C2': (7.578,24.446,3.964)
O2': (7.988,23.226,3.379)
N1: (5.935,26.169,2.985)
N3: (6.348,28.511,2.977)
N4: (5.464,29.853,1.358)
C6: (5.173,26.301,1.854)
C5: (4.982,27.495,1.276)
O3': (8.421,23.381,6.004)
C4: (2.636,29.629,-4.856)
N3: (3.319,30.146,-3.769)
OP1: (-1.493,23.937,-2.550)
OP2: (-0.787,25.762,-4.228)
C2: (3.150,29.816,-2.441)
C1': (1.875,28.395,-0.773)
C3': (0.327,27.388,0.716)
O5': (-0.022,25.830,-1.838)
O4': (2.232,27.029,-0.670)
C5': (0.572,25.257,-0.695)
P: (-0.487,24.900,-3.053)
C4': (1.257,26.318,0.145)
C2': (0.402,28.488,-0.329)
O2': (0.088,29.760,0.205)
N1: (2.167,28.856,-2.197)
O4: (2.907,30.019,-5.982)
O2: (3.818,30.352,-1.569)
C6: (1.459,28.293,-3.244)
C5: (1.645,28.635,-4.530)
O3': (0.794,27.786,1.982)
N3: (3.319,30.146,-3.769)
OP1: (-1.493,23.937,-2.550)
OP2: (-0.787,25.762,-4.228)
C2: (3.150,29.816,-2.441)
C1': (1.875,28.395,-0.773)
C3': (0.327,27.388,0.716)
O5': (-0.022,25.830,-1.838)
O4': (2.232,27.029,-0.670)
C5': (0.572,25.257,-0.695)
P: (-0.487,24.900,-3.053)
C4': (1.257,26.318,0.145)
C2': (0.402,28.488,-0.329)
O2': (0.088,29.760,0.205)
N1: (2.167,28.856,-2.197)
O4: (2.907,30.019,-5.982)
O2: (3.818,30.352,-1.569)
C6: (1.459,28.293,-3.244)
C5: (1.645,28.635,-4.530)
O3': (0.794,27.786,1.982)
Image (generated by PyMOL):