Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0970:0968
Extra
PDB:
ATOM 1 O3' C A 969 58.032 51.609 110.160 1.00 59.85 O
ATOM 2 P C A 970 56.722 52.157 109.401 1.00 63.33 P
ATOM 3 OP1 C A 970 55.912 50.977 108.985 1.00 61.57 O
ATOM 4 OP2 C A 970 57.164 53.148 108.371 1.00 60.72 O
ATOM 5 O5' C A 970 55.951 52.937 110.564 1.00 59.94 O
ATOM 6 C5' C A 970 54.793 53.739 110.296 1.00 58.53 C
ATOM 7 C4' C A 970 54.236 54.292 111.586 1.00 57.70 C
ATOM 8 O4' C A 970 55.211 55.155 112.229 1.00 57.76 O
ATOM 9 C3' C A 970 53.027 55.189 111.418 1.00 58.70 C
ATOM 10 O3' C A 970 51.846 54.426 111.264 1.00 58.38 O
ATOM 11 C2' C A 970 53.041 56.002 112.703 1.00 58.41 C
ATOM 12 O2' C A 970 52.521 55.295 113.810 1.00 58.89 O
ATOM 13 C1' C A 970 54.544 56.225 112.893 1.00 57.82 C
ATOM 14 N1 C A 970 55.022 57.513 112.334 1.00 58.53 N
ATOM 15 C2 C A 970 54.542 58.724 112.882 1.00 58.01 C
ATOM 16 O2 C A 970 53.721 58.687 113.810 1.00 56.88 O
ATOM 17 N3 C A 970 54.989 59.900 112.379 1.00 58.10 N
ATOM 18 C4 C A 970 55.873 59.906 111.377 1.00 58.62 C
ATOM 19 N4 C A 970 56.297 61.087 110.925 1.00 59.49 N
ATOM 20 C5 C A 970 56.367 58.700 110.797 1.00 58.99 C
ATOM 21 C6 C A 970 55.921 57.539 111.301 1.00 58.94 C
ATOM 22 P A A 971 50.963 54.606 109.941 1.00 59.72 P
ATOM 23 OP1 A A 971 49.799 53.680 110.036 1.00 61.14 O
ATOM 24 OP2 A A 971 51.880 54.515 108.768 1.00 59.10 O
ATOM 25 O5' A A 971 50.413 56.095 110.074 1.00 56.74 O
TER
ATOM 1 O3' C B 967 65.664 61.626 107.693 1.00 52.07 O
ATOM 2 P U B 968 64.397 60.893 106.982 1.00 51.91 P
ATOM 3 OP1 U B 968 64.941 59.975 105.950 1.00 50.39 O
ATOM 4 OP2 U B 968 63.388 61.912 106.594 1.00 51.43 O
ATOM 5 O5' U B 968 63.728 60.010 108.125 1.00 52.57 O
ATOM 6 C5' U B 968 64.358 58.818 108.624 1.00 53.83 C
ATOM 7 C4' U B 968 63.421 58.105 109.574 1.00 56.54 C
ATOM 8 O4' U B 968 63.018 59.040 110.619 1.00 56.25 O
ATOM 9 C3' U B 968 62.121 57.589 108.958 1.00 56.72 C
ATOM 10 O3' U B 968 61.685 56.436 109.676 1.00 57.55 O
ATOM 11 C2' U B 968 61.152 58.735 109.225 1.00 56.39 C
ATOM 12 O2' U B 968 59.807 58.316 109.283 1.00 57.16 O
ATOM 13 C1' U B 968 61.614 59.201 110.602 1.00 56.37 C
ATOM 14 N1 U B 968 61.301 60.609 110.882 1.00 57.51 N
ATOM 15 C2 U B 968 60.288 60.879 111.789 1.00 59.29 C
ATOM 16 O2 U B 968 59.655 60.007 112.361 1.00 60.50 O
ATOM 17 N3 U B 968 60.041 62.213 112.002 1.00 59.58 N
ATOM 18 C4 U B 968 60.685 63.284 111.413 1.00 60.25 C
ATOM 19 O4 U B 968 60.345 64.434 111.704 1.00 59.91 O
ATOM 20 C5 U B 968 61.719 62.923 110.491 1.00 59.82 C
ATOM 21 C6 U B 968 61.985 61.631 110.264 1.00 59.04 C
ATOM 22 P C B 969 61.775 54.982 108.998 1.00 57.62 P
ATOM 23 OP1 C B 969 63.166 54.490 109.172 1.00 58.45 O
ATOM 24 OP2 C B 969 61.197 55.056 107.630 1.00 57.05 O
ATOM 25 O5' C B 969 60.810 54.108 109.915 1.00 56.27 O
TER
ATOM 2 P C A 970 56.722 52.157 109.401 1.00 63.33 P
ATOM 3 OP1 C A 970 55.912 50.977 108.985 1.00 61.57 O
ATOM 4 OP2 C A 970 57.164 53.148 108.371 1.00 60.72 O
ATOM 5 O5' C A 970 55.951 52.937 110.564 1.00 59.94 O
ATOM 6 C5' C A 970 54.793 53.739 110.296 1.00 58.53 C
ATOM 7 C4' C A 970 54.236 54.292 111.586 1.00 57.70 C
ATOM 8 O4' C A 970 55.211 55.155 112.229 1.00 57.76 O
ATOM 9 C3' C A 970 53.027 55.189 111.418 1.00 58.70 C
ATOM 10 O3' C A 970 51.846 54.426 111.264 1.00 58.38 O
ATOM 11 C2' C A 970 53.041 56.002 112.703 1.00 58.41 C
ATOM 12 O2' C A 970 52.521 55.295 113.810 1.00 58.89 O
ATOM 13 C1' C A 970 54.544 56.225 112.893 1.00 57.82 C
ATOM 14 N1 C A 970 55.022 57.513 112.334 1.00 58.53 N
ATOM 15 C2 C A 970 54.542 58.724 112.882 1.00 58.01 C
ATOM 16 O2 C A 970 53.721 58.687 113.810 1.00 56.88 O
ATOM 17 N3 C A 970 54.989 59.900 112.379 1.00 58.10 N
ATOM 18 C4 C A 970 55.873 59.906 111.377 1.00 58.62 C
ATOM 19 N4 C A 970 56.297 61.087 110.925 1.00 59.49 N
ATOM 20 C5 C A 970 56.367 58.700 110.797 1.00 58.99 C
ATOM 21 C6 C A 970 55.921 57.539 111.301 1.00 58.94 C
ATOM 22 P A A 971 50.963 54.606 109.941 1.00 59.72 P
ATOM 23 OP1 A A 971 49.799 53.680 110.036 1.00 61.14 O
ATOM 24 OP2 A A 971 51.880 54.515 108.768 1.00 59.10 O
ATOM 25 O5' A A 971 50.413 56.095 110.074 1.00 56.74 O
TER
ATOM 1 O3' C B 967 65.664 61.626 107.693 1.00 52.07 O
ATOM 2 P U B 968 64.397 60.893 106.982 1.00 51.91 P
ATOM 3 OP1 U B 968 64.941 59.975 105.950 1.00 50.39 O
ATOM 4 OP2 U B 968 63.388 61.912 106.594 1.00 51.43 O
ATOM 5 O5' U B 968 63.728 60.010 108.125 1.00 52.57 O
ATOM 6 C5' U B 968 64.358 58.818 108.624 1.00 53.83 C
ATOM 7 C4' U B 968 63.421 58.105 109.574 1.00 56.54 C
ATOM 8 O4' U B 968 63.018 59.040 110.619 1.00 56.25 O
ATOM 9 C3' U B 968 62.121 57.589 108.958 1.00 56.72 C
ATOM 10 O3' U B 968 61.685 56.436 109.676 1.00 57.55 O
ATOM 11 C2' U B 968 61.152 58.735 109.225 1.00 56.39 C
ATOM 12 O2' U B 968 59.807 58.316 109.283 1.00 57.16 O
ATOM 13 C1' U B 968 61.614 59.201 110.602 1.00 56.37 C
ATOM 14 N1 U B 968 61.301 60.609 110.882 1.00 57.51 N
ATOM 15 C2 U B 968 60.288 60.879 111.789 1.00 59.29 C
ATOM 16 O2 U B 968 59.655 60.007 112.361 1.00 60.50 O
ATOM 17 N3 U B 968 60.041 62.213 112.002 1.00 59.58 N
ATOM 18 C4 U B 968 60.685 63.284 111.413 1.00 60.25 C
ATOM 19 O4 U B 968 60.345 64.434 111.704 1.00 59.91 O
ATOM 20 C5 U B 968 61.719 62.923 110.491 1.00 59.82 C
ATOM 21 C6 U B 968 61.985 61.631 110.264 1.00 59.04 C
ATOM 22 P C B 969 61.775 54.982 108.998 1.00 57.62 P
ATOM 23 OP1 C B 969 63.166 54.490 109.172 1.00 58.45 O
ATOM 24 OP2 C B 969 61.197 55.056 107.630 1.00 57.05 O
ATOM 25 O5' C B 969 60.810 54.108 109.915 1.00 56.27 O
TER
Atoms:
C2: (54.542,58.724,112.882)
OP1: (55.912,50.977,108.985)
OP2: (57.164,53.148,108.371)
C4: (55.873,59.906,111.377)
O5': (55.951,52.937,110.564)
C3': (53.027,55.189,111.418)
C1': (54.544,56.225,112.893)
O4': (55.211,55.155,112.229)
C5': (54.793,53.739,110.296)
P: (56.722,52.157,109.401)
O2: (53.721,58.687,113.810)
C4': (54.236,54.292,111.586)
C2': (53.041,56.002,112.703)
O2': (52.521,55.295,113.810)
N1: (55.022,57.513,112.334)
N3: (54.989,59.900,112.379)
N4: (56.297,61.087,110.925)
C6: (55.921,57.539,111.301)
C5: (56.367,58.700,110.797)
O3': (51.846,54.426,111.264)
OP1: (55.912,50.977,108.985)
OP2: (57.164,53.148,108.371)
C4: (55.873,59.906,111.377)
O5': (55.951,52.937,110.564)
C3': (53.027,55.189,111.418)
C1': (54.544,56.225,112.893)
O4': (55.211,55.155,112.229)
C5': (54.793,53.739,110.296)
P: (56.722,52.157,109.401)
O2: (53.721,58.687,113.810)
C4': (54.236,54.292,111.586)
C2': (53.041,56.002,112.703)
O2': (52.521,55.295,113.810)
N1: (55.022,57.513,112.334)
N3: (54.989,59.900,112.379)
N4: (56.297,61.087,110.925)
C6: (55.921,57.539,111.301)
C5: (56.367,58.700,110.797)
O3': (51.846,54.426,111.264)
C4: (60.685,63.284,111.413)
N3: (60.041,62.213,112.002)
OP1: (64.941,59.975,105.950)
OP2: (63.388,61.912,106.594)
C2: (60.288,60.879,111.789)
C1': (61.614,59.201,110.602)
C3': (62.121,57.589,108.958)
O5': (63.728,60.010,108.125)
O4': (63.018,59.040,110.619)
C5': (64.358,58.818,108.624)
P: (64.397,60.893,106.982)
C4': (63.421,58.105,109.574)
C2': (61.152,58.735,109.225)
O2': (59.807,58.316,109.283)
N1: (61.301,60.609,110.882)
O4: (60.345,64.434,111.704)
O2: (59.655,60.007,112.361)
C6: (61.985,61.631,110.264)
C5: (61.719,62.923,110.491)
O3': (61.685,56.436,109.676)
N3: (60.041,62.213,112.002)
OP1: (64.941,59.975,105.950)
OP2: (63.388,61.912,106.594)
C2: (60.288,60.879,111.789)
C1': (61.614,59.201,110.602)
C3': (62.121,57.589,108.958)
O5': (63.728,60.010,108.125)
O4': (63.018,59.040,110.619)
C5': (64.358,58.818,108.624)
P: (64.397,60.893,106.982)
C4': (63.421,58.105,109.574)
C2': (61.152,58.735,109.225)
O2': (59.807,58.316,109.283)
N1: (61.301,60.609,110.882)
O4: (60.345,64.434,111.704)
O2: (59.655,60.007,112.361)
C6: (61.985,61.631,110.264)
C5: (61.719,62.923,110.491)
O3': (61.685,56.436,109.676)
Image (generated by PyMOL):