ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0970:0968

Extra

PDB:
ATOM 1 O3' C A 969 58.183 51.773 110.309 1.00 59.36 O
ATOM 2 P C A 970 56.893 52.334 109.529 1.00 62.41 P
ATOM 3 OP1 C A 970 56.050 51.170 109.143 1.00 61.31 O
ATOM 4 OP2 C A 970 57.373 53.276 108.470 1.00 61.01 O
ATOM 5 O5' C A 970 56.146 53.173 110.671 1.00 59.31 O
ATOM 6 C5' C A 970 54.953 53.930 110.402 1.00 57.59 C
ATOM 7 C4' C A 970 54.378 54.470 111.693 1.00 56.57 C
ATOM 8 O4' C A 970 55.330 55.355 112.340 1.00 56.79 O
ATOM 9 C3' C A 970 53.147 55.339 111.522 1.00 58.08 C
ATOM 10 O3' C A 970 51.977 54.553 111.371 1.00 57.51 O
ATOM 11 C2' C A 970 53.142 56.169 112.799 1.00 56.87 C
ATOM 12 O2' C A 970 52.617 55.479 113.916 1.00 56.34 O
ATOM 13 C1' C A 970 54.639 56.414 112.997 1.00 56.18 C
ATOM 14 N1 C A 970 55.118 57.709 112.455 1.00 57.25 N
ATOM 15 C2 C A 970 54.664 58.918 113.039 1.00 56.09 C
ATOM 16 O2 C A 970 53.854 58.875 113.980 1.00 53.85 O
ATOM 17 N3 C A 970 55.128 60.099 112.556 1.00 55.90 N
ATOM 18 C4 C A 970 56.001 60.111 111.543 1.00 57.24 C
ATOM 19 N4 C A 970 56.452 61.293 111.114 1.00 57.75 N
ATOM 20 C5 C A 970 56.461 58.909 110.926 1.00 57.08 C
ATOM 21 C6 C A 970 55.999 57.745 111.407 1.00 57.65 C
ATOM 22 P A A 971 51.018 54.812 110.117 1.00 58.29 P
ATOM 23 OP1 A A 971 49.815 53.944 110.258 1.00 60.17 O
ATOM 24 OP2 A A 971 51.849 54.723 108.879 1.00 57.93 O
ATOM 25 O5' A A 971 50.556 56.319 110.324 1.00 55.52 O
TER

ATOM 1 O3' C B 967 65.744 61.755 107.864 1.00 50.82 O
ATOM 2 P U B 968 64.478 61.096 107.085 1.00 49.56 P
ATOM 3 OP1 U B 968 65.032 60.205 106.034 1.00 49.56 O
ATOM 4 OP2 U B 968 63.523 62.167 106.701 1.00 48.54 O
ATOM 5 O5' U B 968 63.746 60.188 108.174 1.00 50.63 O
ATOM 6 C5' U B 968 64.377 59.014 108.724 1.00 51.76 C
ATOM 7 C4' U B 968 63.440 58.318 109.688 1.00 54.38 C
ATOM 8 O4' U B 968 63.063 59.246 110.748 1.00 55.78 O
ATOM 9 C3' U B 968 62.127 57.808 109.100 1.00 55.11 C
ATOM 10 O3' U B 968 61.702 56.654 109.824 1.00 55.47 O
ATOM 11 C2' U B 968 61.168 58.956 109.391 1.00 55.28 C
ATOM 12 O2' U B 968 59.817 58.544 109.471 1.00 56.56 O
ATOM 13 C1' U B 968 61.660 59.417 110.760 1.00 54.94 C
ATOM 14 N1 U B 968 61.366 60.830 111.039 1.00 56.09 N
ATOM 15 C2 U B 968 60.360 61.119 111.947 1.00 57.25 C
ATOM 16 O2 U B 968 59.716 60.262 112.522 1.00 58.80 O
ATOM 17 N3 U B 968 60.135 62.455 112.156 1.00 57.84 N
ATOM 18 C4 U B 968 60.793 63.514 111.565 1.00 57.92 C
ATOM 19 O4 U B 968 60.470 64.667 111.857 1.00 58.28 O
ATOM 20 C5 U B 968 61.820 63.138 110.641 1.00 58.05 C
ATOM 21 C6 U B 968 62.066 61.842 110.416 1.00 57.61 C
ATOM 22 P C B 969 61.868 55.189 109.180 1.00 54.34 P
ATOM 23 OP1 C B 969 63.271 54.769 109.393 1.00 55.93 O
ATOM 24 OP2 C B 969 61.317 55.203 107.798 1.00 54.42 O
ATOM 25 O5' C B 969 60.928 54.298 110.110 1.00 53.70 O
TER

Atoms:
C2: (54.664,58.918,113.039)
OP1: (56.050,51.170,109.143)
OP2: (57.373,53.276,108.470)
C4: (56.001,60.111,111.543)
O5': (56.146,53.173,110.671)
C3': (53.147,55.339,111.522)
C1': (54.639,56.414,112.997)
O4': (55.330,55.355,112.340)
C5': (54.953,53.930,110.402)
P: (56.893,52.334,109.529)
O2: (53.854,58.875,113.980)
C4': (54.378,54.470,111.693)
C2': (53.142,56.169,112.799)
O2': (52.617,55.479,113.916)
N1: (55.118,57.709,112.455)
N3: (55.128,60.099,112.556)
N4: (56.452,61.293,111.114)
C6: (55.999,57.745,111.407)
C5: (56.461,58.909,110.926)
O3': (51.977,54.553,111.371)
C4: (60.793,63.514,111.565)
N3: (60.135,62.455,112.156)
OP1: (65.032,60.205,106.034)
OP2: (63.523,62.167,106.701)
C2: (60.360,61.119,111.947)
C1': (61.660,59.417,110.760)
C3': (62.127,57.808,109.100)
O5': (63.746,60.188,108.174)
O4': (63.063,59.246,110.748)
C5': (64.377,59.014,108.724)
P: (64.478,61.096,107.085)
C4': (63.440,58.318,109.688)
C2': (61.168,58.956,109.391)
O2': (59.817,58.544,109.471)
N1: (61.366,60.830,111.039)
O4: (60.470,64.667,111.857)
O2: (59.716,60.262,112.522)
C6: (62.066,61.842,110.416)
C5: (61.820,63.138,110.641)
O3': (61.702,56.654,109.824)
Image (generated by PyMOL):
PyMOL image
show in jmol